RNA–Protein interactions for RNA: ENST00000454885.6

ARL6IP4-211, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARL6IP4, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-211	ENST00000454885	ABCC12	Q96J65	1359 aa		32.84	■■■□□ 2.85
ARL6IP4-211	ENST00000454885	DPY19L2	Q6NUT2	758 aa		32.83	■■■□□ 2.85
ARL6IP4-211	ENST00000454885	RPGR	Q92834	1020 aa	Known RBP	32.83	■■■□□ 2.85
ARL6IP4-211	ENST00000454885	ARFGEF2	Q9Y6D5	1785 aa		32.83	■■■□□ 2.85
ARL6IP4-211	ENST00000454885	HOXA10	P31260	410 aa	Predicted RBP	32.82	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	TCIRG1	Q13488	830 aa		32.82	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	CCDC27	Q2M243	656 aa		32.82	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	RTKN2	Q8IZC4	609 aa		32.82	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	FER1L6	Q2WGJ9	1857 aa		32.82	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	NCBP3	Q53F19	620 aa	Known RBP	32.81	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	SLC10A5	Q5PT55	438 aa		32.81	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	RRAGC	Q9HB90	399 aa		32.81	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	ANKRD13D	Q6ZTN6	518 aa		32.8	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	PLBD2	Q8NHP8	589 aa		32.8	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	NLRP3	Q96P20	1036 aa		32.8	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	HSPA6	P17066	643 aa		32.79	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	CC2D2B	Q6DHV5	1058 aa		32.78	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	NLRP10	Q86W26	655 aa		32.78	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	RBM46	Q8TBY0	533 aa	Known RBP	32.78	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	RBM17	Q96I25	401 aa	Known RBP	32.78	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	CRAMP1	Q96RY5	1269 aa		32.77	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.77	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	GRIPAP1	Q4V328	841 aa		32.77	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	CACNA1S	Q13698	1873 aa		32.76	■■■□□ 2.84
ARL6IP4-211	ENST00000454885	CCDC88A	Q3V6T2	1871 aa		32.76	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	VEGFA	P15692	232 aa	Predicted RBP	32.76	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	WWC1	Q8IX03	1113 aa		32.75	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	TRMT112	Q9UI30	125 aa	Known RBP	32.75	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.74	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	ELL2	O00472	640 aa	Predicted RBP	32.74	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	FSTL1	Q12841	308 aa		32.72	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	C8orf58	Q8NAV2	365 aa		32.72	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	SH3TC1	Q8TE82	1336 aa		32.71	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	TIAM2	Q8IVF5	1701 aa		32.71	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	DICER1	Q9UPY3	1922 aa	Known RBP	32.71	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	CCDC30	Q5VVM6	783 aa		32.71	■■■□□ 2.83
ARL6IP4-211	ENST00000454885	OLFM4	Q6UX06	510 aa		32.7	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	PSMD1	Q99460	953 aa		32.7	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	TMX4	Q9H1E5	349 aa	Predicted RBP	32.7	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	IL16	Q14005	1332 aa		32.7	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	ANKRD36C	Q5JPF3	1778 aa		32.69	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	GOLGA2	Q08379	1002 aa		32.69	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	ISCA1	Q9BUE6	129 aa		32.69	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	TRIM28	Q13263	835 aa	Known RBP	32.68	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	C3orf67	Q6ZVT6	689 aa		32.68	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	SYNE4	Q8N205	404 aa		32.68	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.68	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	PPEF1	O14829	653 aa	Predicted RBP	32.67	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	RIC3	Q7Z5B4	369 aa		32.67	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	APLP1	P51693	650 aa		32.66	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	BBOX1	O75936	387 aa		32.65	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	HCLS1	P14317	486 aa	Predicted RBP	32.65	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	IARS	P41252	1262 aa	Known RBP	32.65	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	SMC1B	Q8NDV3	1235 aa		32.65	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	PHAX	Q9H814	394 aa	Known RBP	32.64	■■■□□ 2.82
ARL6IP4-211	ENST00000454885	ATP5J2-PTCD1	G3V325	749 aa		32.63	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	DDX58	O95786	925 aa	Known RBP	32.63	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	TSR2	Q969E8	191 aa	Known RBP	32.63	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	DDX46	Q7L014	1031 aa	Known RBP	32.62	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	WDR63	Q8IWG1	891 aa		32.62	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	ATP6V0A2	Q9Y487	856 aa		32.62	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	SNED1	Q8TER0	1413 aa		32.61	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	DDN	O94850	711 aa	Predicted RBP	32.61	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	TSPYL6	Q8N831	410 aa		32.61	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	JDP2	Q8WYK2	163 aa		32.61	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	WDR90	Q96KV7	1748 aa		32.61	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	ABCC4	O15439	1325 aa		32.6	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	POTEC	B2RU33	542 aa		32.6	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	STK31	Q9BXU1	1019 aa		32.6	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	HSP90B1	P14625	803 aa	Known RBP	32.59	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	FAM89A	Q96GI7	184 aa		32.59	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	TCERG1	O14776	1098 aa	Known RBP	32.58	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	TWISTNB	Q3B726	338 aa	Predicted RBP	32.58	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	VPS33B	Q9H267	617 aa		32.58	■■■□□ 2.81
ARL6IP4-211	ENST00000454885	IQCA1L	A6NCM1	817 aa		32.57	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	FZD9	O00144	591 aa		32.57	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	TMC4	Q7Z404	712 aa		32.57	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	SP8	Q8IXZ3	490 aa		32.57	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	CCDC191	Q8NCU4	936 aa		32.56	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.56	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	GRAP	Q13588	217 aa		32.55	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	SF3B3	Q15393	1217 aa	Known RBP	32.55	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	FAM9B	Q8IZU0	186 aa		32.55	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.55	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	GRAPL	Q8TC17	118 aa	Predicted RBP	32.55	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	SUPT20H	Q8NEM7	779 aa		32.54	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	MYD88	Q99836	296 aa		32.54	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	METTL22	Q9BUU2	404 aa	Predicted RBP	32.54	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	SALL2	Q9Y467	1007 aa	Predicted RBP	32.54	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	CEP350	Q5VT06	3117 aa		32.53	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	IRS4	O14654	1257 aa	Predicted RBP	32.52	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	KSR2	Q6VAB6	950 aa		32.52	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	LARGE2	Q8N3Y3	721 aa		32.52	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	ZNF428	Q96B54	188 aa		32.52	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	EIF6	P56537	245 aa	Known RBP	32.51	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	GPC2	Q8N158	579 aa		32.51	■■■□□ 2.8
ARL6IP4-211	ENST00000454885	RTL5	Q5HYW3	569 aa	Predicted RBP	32.51	■■■□□ 2.79
ARL6IP4-211	ENST00000454885	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.51	■■■□□ 2.79
ARL6IP4-211	ENST00000454885	CWC25	Q9NXE8	425 aa	Predicted RBP	32.51	■■■□□ 2.79
ARL6IP4-211	ENST00000454885	MAP3K2	Q9Y2U5	619 aa		32.51	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms