RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 LONRF1Q17RB8 773 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 WDR63Q8IWG1 891 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 STK32AQ8WU08 396 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 TRPM3Q9HCF6 1732 aaPredicted RBP9.6□□□□□ -0.87
BRCC3-208ENST00000453705 CAMTA1Q9Y6Y1 1673 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 LDHAP00338 332 aaKnown RBP9.59□□□□□ -0.87
BRCC3-208ENST00000453705 RRM1P23921 792 aa9.59□□□□□ -0.87
BRCC3-208ENST00000453705 DUSP27Q5VZP5 1158 aa9.59□□□□□ -0.87
BRCC3-208ENST00000453705 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
BRCC3-208ENST00000453705 TRIM34Q9BYJ4 488 aa9.59□□□□□ -0.87
BRCC3-208ENST00000453705 PRR36Q9H6K5 1346 aa9.59□□□□□ -0.87
BRCC3-208ENST00000453705 RRP1P56182 461 aaKnown RBP9.59□□□□□ -0.87
BRCC3-208ENST00000453705 SYCP2LQ5T4T6 812 aa9.59□□□□□ -0.87
BRCC3-208ENST00000453705 CCAR1Q8IX12 1150 aaKnown RBP9.59□□□□□ -0.87
BRCC3-208ENST00000453705 QTRT2Q9H974 415 aaKnown RBP9.59□□□□□ -0.87
BRCC3-208ENST00000453705 ADGRL3Q9HAR2 1447 aa9.59□□□□□ -0.87
BRCC3-208ENST00000453705 DNAJA1P31689 397 aaKnown RBP9.59□□□□□ -0.88
BRCC3-208ENST00000453705 IRX3P78415 501 aaPredicted RBP9.59□□□□□ -0.88
BRCC3-208ENST00000453705 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.88
BRCC3-208ENST00000453705 MSL3Q8N5Y2 521 aaKnown RBP9.59□□□□□ -0.88
BRCC3-208ENST00000453705 ZCRB1Q8TBF4 217 aaKnown RBP9.59□□□□□ -0.88
BRCC3-208ENST00000453705 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.88
BRCC3-208ENST00000453705 CARD10Q9BWT7 1032 aa9.59□□□□□ -0.88
BRCC3-208ENST00000453705 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.88
BRCC3-208ENST00000453705 SLAIN2Q9P270 581 aa9.59□□□□□ -0.88
BRCC3-208ENST00000453705 LRRC37A3O60309 1634 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 GOLGA2Q08379 1002 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 RCAN3Q9UKA8 241 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 ABCC6O95255 1503 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 NRDCO43847 1150 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 KANK3Q6NY19 840 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 SLC26A8Q96RN1 970 aa9.58□□□□□ -0.88
BRCC3-208ENST00000453705 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.58□□□□□ -0.88
BRCC3-208ENST00000453705 CUEDC1Q9NWM3 386 aaPredicted RBP9.58□□□□□ -0.88
BRCC3-208ENST00000453705 PRC1O43663 620 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 LMNB1P20700 586 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 VAMP1P23763 118 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 TDO2P48775 406 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 WDR75Q8IWA0 830 aaKnown RBP9.57□□□□□ -0.88
BRCC3-208ENST00000453705 UCN2Q96RP3 112 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 PLEKHF1Q96S99 279 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 CABP1Q9NZU7 370 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 MTHFSP49914 203 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 NEXNQ0ZGT2 675 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 C1QTNF12Q5T7M4 302 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 ARPC5LQ9BPX5 153 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 IER2Q9BTL4 223 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
BRCC3-208ENST00000453705 DCCP43146 1447 aa9.57□□□□□ -0.88
BRCC3-208ENST00000453705 CD53P19397 219 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 RFC5P40937 340 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 NUBP1P53384 320 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 HDAC1Q13547 482 aaPredicted RBP9.56□□□□□ -0.88
BRCC3-208ENST00000453705 ODR4Q5SWX8 454 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 CC2D1AQ6P1N0 951 aaPredicted RBP9.56□□□□□ -0.88
BRCC3-208ENST00000453705 FAM161BQ96MY7 647 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 MUC3BQ9H195 1237 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 LDHCP07864 332 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 GSE1Q14687 1217 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 C10orf62Q5T681 223 aaPredicted RBP9.56□□□□□ -0.88
BRCC3-208ENST00000453705 SLIT3O75094 1523 aa9.56□□□□□ -0.88
BRCC3-208ENST00000453705 ZRANB2O95218 330 aaKnown RBP eCLIP9.55□□□□□ -0.88
BRCC3-208ENST00000453705 IGHDP01880 384 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 AMPD3Q01432 767 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 SLC39A13Q96H72 371 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 BSDC1Q9NW68 430 aaPredicted RBP9.55□□□□□ -0.88
BRCC3-208ENST00000453705 ISY1Q9ULR0 285 aaKnown RBP9.55□□□□□ -0.88
BRCC3-208ENST00000453705 ALS2Q96Q42 1657 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 SOWAHDA6NJG2 315 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 TGFB3P10600 412 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 ATP2B1P20020 1258 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.885e-6■□□□□ 11
BRCC3-208ENST00000453705 ACBD3Q9H3P7 528 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 CAPN10Q9HC96 672 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 LTN1O94822 1766 aa9.55□□□□□ -0.88
BRCC3-208ENST00000453705 CRYBG1Q9Y4K1 1723 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 TMEM164Q5U3C3 297 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 TSC1Q92574 1164 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 RSPH9Q9H1X1 276 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-208ENST00000453705 JADE2Q9NQC1 790 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 N4BP2Q86UW6 1770 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-208ENST00000453705 STRCP1A6NGW2 1772 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 STRCQ7RTU9 1775 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 RTL1A6NKG5 1358 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 PLEKHG2Q9H7P9 1386 aa9.54□□□□□ -0.88
BRCC3-208ENST00000453705 POU5F1Q01860 360 aaKnown RBP9.54□□□□□ -0.88
BRCC3-208ENST00000453705 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
BRCC3-208ENST00000453705 VIRMAQ69YN4 1812 aaKnown RBP9.54□□□□□ -0.88
BRCC3-208ENST00000453705 XIRP1Q702N8 1843 aaKnown RBP9.53□□□□□ -0.88
BRCC3-208ENST00000453705 FCHSD2O94868 740 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 UBE4AQ14139 1066 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 ZNF746Q6NUN9 644 aaPredicted RBP9.53□□□□□ -0.88
BRCC3-208ENST00000453705 NFAT5O94916 1531 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 TTC21BQ7Z4L5 1316 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 TNFRSF10BO14763 440 aa9.53□□□□□ -0.88
BRCC3-208ENST00000453705 NBPF9Q3BBW0 867 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms