RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 FOXR1Q6PIV2 292 aa8.45□□□□□ -1.06
USP25-206ENST00000453553 CEP63Q96MT8 703 aa8.45□□□□□ -1.06
USP25-206ENST00000453553 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
USP25-206ENST00000453553 TUT1Q9H6E5 874 aaKnown RBP8.45□□□□□ -1.06
USP25-206ENST00000453553 OPLAHO14841 1288 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 BNIP3LO60238 219 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 ARHGEF15O94989 841 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 IDH3AP50213 366 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 ALKBH2Q6NS38 261 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 CFHR5Q9BXR6 569 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 NDFIP2Q9NV92 336 aa8.44□□□□□ -1.06
USP25-206ENST00000453553 FAM157BP0CG42 384 aa8.43□□□□□ -1.06
USP25-206ENST00000453553 INPP5BP32019 993 aa8.43□□□□□ -1.06
USP25-206ENST00000453553 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
USP25-206ENST00000453553 TNP2Q05952 138 aa8.43□□□□□ -1.06
USP25-206ENST00000453553 TYRO3Q06418 890 aa8.43□□□□□ -1.06
USP25-206ENST00000453553 SVOPQ8N4V2 548 aa8.43□□□□□ -1.06
USP25-206ENST00000453553 KHNYNO15037 678 aaKnown RBP8.42□□□□□ -1.06
USP25-206ENST00000453553 SLURP2P0DP57 97 aa8.42□□□□□ -1.06
USP25-206ENST00000453553 MAPTP10636 758 aaKnown RBP8.42□□□□□ -1.06
USP25-206ENST00000453553 IRS1P35568 1242 aa8.42□□□□□ -1.06
USP25-206ENST00000453553 ZAP70P43403 619 aa8.42□□□□□ -1.06
USP25-206ENST00000453553 GPAT2Q6NUI2 795 aa8.42□□□□□ -1.06
USP25-206ENST00000453553 TRERF1Q96PN7 1200 aa8.42□□□□□ -1.06
USP25-206ENST00000453553 BIN2Q9UBW5 565 aaPredicted RBP8.42□□□□□ -1.06
USP25-206ENST00000453553 PHF24Q9UPV7 400 aa8.42□□□□□ -1.06
USP25-206ENST00000453553 DCDC2BA2VCK2 349 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 GPR25O00155 361 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 EFSO43281 561 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 ARSDP51689 593 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 AAMPQ13685 434 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 LAMC2Q13753 1193 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 ABHD17AQ96GS6 310 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 FAM13BQ9NYF5 915 aa8.41□□□□□ -1.06
USP25-206ENST00000453553 ATXN7L1Q9ULK2 861 aaPredicted RBP8.41□□□□□ -1.06
USP25-206ENST00000453553 KCNQ4P56696 695 aa8.4□□□□□ -1.06
USP25-206ENST00000453553 SFSWAPQ12872 951 aaKnown RBP8.4□□□□□ -1.06
USP25-206ENST00000453553 SND1Q7KZF4 910 aaKnown RBP eCLIP8.4□□□□□ -1.06
USP25-206ENST00000453553 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
USP25-206ENST00000453553 KCNH4Q9UQ05 1017 aa8.4□□□□□ -1.06
USP25-206ENST00000453553 EPB42P16452 691 aa8.39□□□□□ -1.07
USP25-206ENST00000453553 GPR152Q8TDT2 470 aa8.39□□□□□ -1.07
USP25-206ENST00000453553 PIK3R5Q8WYR1 880 aa8.39□□□□□ -1.07
USP25-206ENST00000453553 STRN4Q9NRL3 753 aa8.39□□□□□ -1.07
USP25-206ENST00000453553 MARK1Q9P0L2 795 aa8.39□□□□□ -1.07
USP25-206ENST00000453553 HCN2Q9UL51 889 aa8.39□□□□□ -1.07
USP25-206ENST00000453553 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
USP25-206ENST00000453553 FZD6O60353 706 aa8.38□□□□□ -1.07
USP25-206ENST00000453553 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
USP25-206ENST00000453553 GRNP28799 593 aaKnown RBP8.38□□□□□ -1.07
USP25-206ENST00000453553 RGL4Q8IZJ4 473 aa8.38□□□□□ -1.07
USP25-206ENST00000453553 CMTR1Q8N1G2 835 aaKnown RBP8.38□□□□□ -1.07
USP25-206ENST00000453553 C11orf16Q9NQ32 467 aa8.38□□□□□ -1.07
USP25-206ENST00000453553 CCDC87Q9NVE4 849 aa8.38□□□□□ -1.07
USP25-206ENST00000453553 USP20Q9Y2K6 914 aa8.38□□□□□ -1.07
USP25-206ENST00000453553 FGFR3P22607 806 aa8.37□□□□□ -1.07
USP25-206ENST00000453553 CTBSQ01459 385 aa8.37□□□□□ -1.07
USP25-206ENST00000453553 DNM1Q05193 864 aaKnown RBP8.37□□□□□ -1.07
USP25-206ENST00000453553 EDEM1Q92611 657 aa8.37□□□□□ -1.07
USP25-206ENST00000453553 IGHA1P01876 353 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 PDGFAP04085 211 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 CD33P20138 364 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 GAS6Q14393 721 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 BRPF3Q9ULD4 1205 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 KCNMB2Q9Y691 235 aa8.36□□□□□ -1.07
USP25-206ENST00000453553 RPLP1P05386 114 aaKnown RBP8.35□□□□□ -1.07
USP25-206ENST00000453553 PCSK2P16519 638 aa8.35□□□□□ -1.07
USP25-206ENST00000453553 NUDT16Q96DE0 195 aaKnown RBP8.35□□□□□ -1.07
USP25-206ENST00000453553 NDUFB5O43674 189 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 EGFRP00533 1210 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 MX2P20592 715 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
USP25-206ENST00000453553 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 CITED4Q96RK1 184 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 GSX2Q9BZM3 304 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 DCTN4Q9UJW0 460 aa8.34□□□□□ -1.07
USP25-206ENST00000453553 FNDC3AQ9Y2H6 1198 aaKnown RBP8.34□□□□□ -1.07
USP25-206ENST00000453553 C2CD2LO14523 706 aa8.33□□□□□ -1.08
USP25-206ENST00000453553 USP5P45974 858 aa8.33□□□□□ -1.08
USP25-206ENST00000453553 CCINQ13939 588 aa8.33□□□□□ -1.08
USP25-206ENST00000453553 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
USP25-206ENST00000453553 GGNBP2Q9H3C7 697 aa8.33□□□□□ -1.08
USP25-206ENST00000453553 MBIPQ9NS73 344 aa8.33□□□□□ -1.08
USP25-206ENST00000453553 UBAP1LF5GYI3 381 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 XYLBO75191 536 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 BMP4P12644 408 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 SPEM2Q0P670 501 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 XP32Q5T750 250 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 TMCO4Q5TGY1 634 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 TTC16Q8NEE8 873 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 SLC30A3Q99726 388 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 RBCK1Q9BYM8 510 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 EFCC1Q9HA90 598 aa8.32□□□□□ -1.08
USP25-206ENST00000453553 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms