RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 ISCA1Q9BUE6 129 aa10.22□□□□□ -0.77
CNOT4-207ENST00000451834 HSPA6P17066 643 aa10.21□□□□□ -0.77
CNOT4-207ENST00000451834 LMNB1P20700 586 aa10.21□□□□□ -0.77
CNOT4-207ENST00000451834 TBC1D9BQ66K14 1250 aa10.21□□□□□ -0.77
CNOT4-207ENST00000451834 DDX60LQ5H9U9 1706 aaKnown RBP10.21□□□□□ -0.77
CNOT4-207ENST00000451834 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
CNOT4-207ENST00000451834 PLA2G12BQ9BX93 195 aa10.21□□□□□ -0.77
CNOT4-207ENST00000451834 ABCC12Q96J65 1359 aa10.21□□□□□ -0.78
CNOT4-207ENST00000451834 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.78
CNOT4-207ENST00000451834 TOMM70O94826 608 aa10.2□□□□□ -0.78
CNOT4-207ENST00000451834 TMPOP42166 694 aaKnown RBP10.2□□□□□ -0.78
CNOT4-207ENST00000451834 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
CNOT4-207ENST00000451834 IRS2Q9Y4H2 1338 aa10.2□□□□□ -0.78
CNOT4-207ENST00000451834 CFAP44Q96MT7 982 aa10.2□□□□□ -0.78
CNOT4-207ENST00000451834 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
CNOT4-207ENST00000451834 GLTPD2A6NH11 291 aa10.2□□□□□ -0.78
CNOT4-207ENST00000451834 HSP90AB3PQ58FF7 597 aa10.2□□□□□ -0.78
CNOT4-207ENST00000451834 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
CNOT4-207ENST00000451834 ZPR1O75312 459 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 BRPF1P55201 1214 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-207ENST00000451834 SF3B3Q15393 1217 aaKnown RBP10.19□□□□□ -0.78
CNOT4-207ENST00000451834 NFKBIBQ15653 356 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 TTC5Q8N0Z6 440 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 FGD1P98174 961 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 TTLL6Q8N841 843 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 SYTL4Q96C24 671 aaPredicted RBP10.19□□□□□ -0.78
CNOT4-207ENST00000451834 CALD1Q05682 793 aaKnown RBP10.19□□□□□ -0.78
CNOT4-207ENST00000451834 RTKN2Q8IZC4 609 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 SRP68Q9UHB9 627 aaKnown RBP10.19□□□□□ -0.78
CNOT4-207ENST00000451834 CDK5RAP2Q96SN8 1893 aa10.19□□□□□ -0.78
CNOT4-207ENST00000451834 UBN2Q6ZU65 1347 aa10.18□□□□□ -0.78
CNOT4-207ENST00000451834 TEFQ10587 303 aa10.18□□□□□ -0.78
CNOT4-207ENST00000451834 DDX21Q9NR30 783 aaKnown RBP eCLIP10.18□□□□□ -0.78
CNOT4-207ENST00000451834 PHIPQ8WWQ0 1821 aa10.18□□□□□ -0.78
CNOT4-207ENST00000451834 KCNQ4P56696 695 aa10.17□□□□□ -0.78
CNOT4-207ENST00000451834 RRAGDQ9NQL2 400 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-207ENST00000451834 UTYO14607 1347 aa10.17□□□□□ -0.78
CNOT4-207ENST00000451834 LOC285556D6RIA3 1793 aa10.17□□□□□ -0.78
CNOT4-207ENST00000451834 GLIPR1L2Q4G1C9 344 aa10.17□□□□□ -0.78
CNOT4-207ENST00000451834 HMOX1P09601 288 aa10.17□□□□□ -0.78
CNOT4-207ENST00000451834 ST5P78524 1137 aa10.16□□□□□ -0.78
CNOT4-207ENST00000451834 CC2D1BQ5T0F9 858 aaKnown RBP10.16□□□□□ -0.78
CNOT4-207ENST00000451834 ALDH1B1P30837 517 aa10.16□□□□□ -0.78
CNOT4-207ENST00000451834 DZIP3Q86Y13 1208 aaKnown RBP10.16□□□□□ -0.78
CNOT4-207ENST00000451834 MRS2Q9HD23 443 aa10.16□□□□□ -0.78
CNOT4-207ENST00000451834 USP16Q9Y5T5 823 aa10.16□□□□□ -0.78
CNOT4-207ENST00000451834 GPR162Q16538 588 aa10.15□□□□□ -0.78
CNOT4-207ENST00000451834 NAP1L5Q96NT1 182 aaPredicted RBP10.15□□□□□ -0.78
CNOT4-207ENST00000451834 PDE4AP27815 886 aa10.15□□□□□ -0.78
CNOT4-207ENST00000451834 FKBP1AP62942 108 aaKnown RBP10.15□□□□□ -0.78
CNOT4-207ENST00000451834 WDR63Q8IWG1 891 aa10.15□□□□□ -0.78
CNOT4-207ENST00000451834 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
CNOT4-207ENST00000451834 KIF16BQ96L93 1317 aa10.15□□□□□ -0.78
CNOT4-207ENST00000451834 H0YIN7 160 aa10.15□□□□□ -0.79
CNOT4-207ENST00000451834 FRAT2O75474 233 aaPredicted RBP10.15□□□□□ -0.79
CNOT4-207ENST00000451834 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.79
CNOT4-207ENST00000451834 KCNQ3O43525 872 aa10.14□□□□□ -0.79
CNOT4-207ENST00000451834 UNCXA6NJT0 531 aa10.14□□□□□ -0.79
CNOT4-207ENST00000451834 CCDC93Q567U6 631 aa10.14□□□□□ -0.79
CNOT4-207ENST00000451834 TRMT2AQ8IZ69 625 aaKnown RBP10.14□□□□□ -0.79
CNOT4-207ENST00000451834 PPM1GO15355 546 aaPredicted RBP10.13□□□□□ -0.79
CNOT4-207ENST00000451834 SLC39A6Q13433 755 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 SP8Q8IXZ3 490 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 SMC1BQ8NDV3 1235 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 AKAP11Q9UKA4 1901 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 CNTNAP1P78357 1384 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 C2CD5Q86YS7 1000 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 HYPKQ9NX55 129 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 HSP90AA2PQ14568 343 aaPredicted RBP10.13□□□□□ -0.79
CNOT4-207ENST00000451834 MSL1Q68DK7 614 aa10.13□□□□□ -0.79
CNOT4-207ENST00000451834 RTF1Q92541 710 aaKnown RBP10.13□□□□□ -0.79
CNOT4-207ENST00000451834 CNBD1Q8NA66 436 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 CFHR5Q9BXR6 569 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 TCIRG1Q13488 830 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 SUPT20HQ8NEM7 779 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 ZNF428Q96B54 188 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 SETDB2Q96T68 719 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 COL2A1P02458 1487 aaPredicted RBP10.12□□□□□ -0.79
CNOT4-207ENST00000451834 A0A0G2JLW4 131 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 IGSF3O75054 1194 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 CASP7P55210 303 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 TPTE2Q6XPS3 522 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 GPC2Q8N158 579 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 FAM43AQ8N2R8 423 aa10.12□□□□□ -0.79
CNOT4-207ENST00000451834 AAMPQ13685 434 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 NOM1Q5C9Z4 860 aaKnown RBP10.11□□□□□ -0.79
CNOT4-207ENST00000451834 C9orf131Q5VYM1 1079 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 PITPNM2Q9BZ72 1349 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 BBOX1O75936 387 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 PHF14O94880 888 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 MED23Q9ULK4 1368 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
CNOT4-207ENST00000451834 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
CNOT4-207ENST00000451834 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.793e-20■■■■■ 41.5
CNOT4-207ENST00000451834 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
CNOT4-207ENST00000451834 PPP1R42Q7Z4L9 355 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 ZC3H15Q8WU90 426 aaKnown RBP10.11□□□□□ -0.79
CNOT4-207ENST00000451834 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
CNOT4-207ENST00000451834 RASSF10A6NK89 507 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms