RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 ABCC6O95255 1503 aa20.14■□□□□ 0.81
SNHG17-207ENST00000449469 LRRC59Q96AG4 307 aaKnown RBP20.14■□□□□ 0.81
SNHG17-207ENST00000449469 FIBPO43427 364 aa20.13■□□□□ 0.81
SNHG17-207ENST00000449469 TSGA10IPQ3SY00 556 aa20.13■□□□□ 0.81
SNHG17-207ENST00000449469 LARP1Q6PKG0 1096 aaKnown RBP20.13■□□□□ 0.81
SNHG17-207ENST00000449469 FUCA2Q9BTY2 467 aa20.13■□□□□ 0.81
SNHG17-207ENST00000449469 MED23Q9ULK4 1368 aa20.13■□□□□ 0.81
SNHG17-207ENST00000449469 LARGE1O95461 756 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 KCNJ4P48050 445 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 ADCK5Q3MIX3 580 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.12■□□□□ 0.81
SNHG17-207ENST00000449469 COL15A1P39059 1388 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 KRT85P78386 507 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 NEXNQ0ZGT2 675 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 SUCLG2Q96I99 432 aa20.12■□□□□ 0.81
SNHG17-207ENST00000449469 SASH1O94885 1247 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 PROSER3Q2NL68 480 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 CWF19L2Q2TBE0 894 aaKnown RBP20.11■□□□□ 0.81
SNHG17-207ENST00000449469 PIBF1Q8WXW3 757 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 PA2G4Q9UQ80 394 aaKnown RBP20.11■□□□□ 0.81
SNHG17-207ENST00000449469 SLC27A2O14975 620 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 KDM4AO75164 1064 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 NMIQ13287 307 aaPredicted RBP20.11■□□□□ 0.81
SNHG17-207ENST00000449469 KRT32Q14532 448 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 ME3Q16798 604 aa20.11■□□□□ 0.81
SNHG17-207ENST00000449469 BICC1Q9H694 974 aaKnown RBP20.11■□□□□ 0.81
SNHG17-207ENST00000449469 KIF1AQ12756 1690 aa20.1■□□□□ 0.81
SNHG17-207ENST00000449469 UQCRHLA0A096LP55 91 aa20.1■□□□□ 0.81
SNHG17-207ENST00000449469 UQCRHP07919 91 aa20.1■□□□□ 0.81
SNHG17-207ENST00000449469 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
SNHG17-207ENST00000449469 EAF2Q96CJ1 260 aaPredicted RBP20.1■□□□□ 0.81
SNHG17-207ENST00000449469 USP25Q9UHP3 1055 aa20.1■□□□□ 0.81
SNHG17-207ENST00000449469 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
SNHG17-207ENST00000449469 ADCY5O95622 1261 aa20.09■□□□□ 0.81
SNHG17-207ENST00000449469 CCDC192P0DO97 292 aa20.09■□□□□ 0.81
SNHG17-207ENST00000449469 HCLS1P14317 486 aaPredicted RBP20.09■□□□□ 0.81
SNHG17-207ENST00000449469 DNM1Q05193 864 aaKnown RBP20.09■□□□□ 0.81
SNHG17-207ENST00000449469 KAZALD1Q96I82 304 aa20.09■□□□□ 0.81
SNHG17-207ENST00000449469 TICAM2Q86XR7 235 aa20.09■□□□□ 0.81
SNHG17-207ENST00000449469 PRIMPOLQ96LW4 560 aa20.09■□□□□ 0.81
SNHG17-207ENST00000449469 FSD1Q9BTV5 496 aa20.09■□□□□ 0.81
SNHG17-207ENST00000449469 NPHP4O75161 1426 aaPredicted RBP20.08■□□□□ 0.81
SNHG17-207ENST00000449469 CPA1P15085 419 aa20.08■□□□□ 0.81
SNHG17-207ENST00000449469 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
SNHG17-207ENST00000449469 ST3GAL1Q11201 340 aa20.08■□□□□ 0.81
SNHG17-207ENST00000449469 LARP1BQ659C4 914 aaKnown RBP20.08■□□□□ 0.81
SNHG17-207ENST00000449469 SCAND2PQ9GZW5 306 aaPredicted RBP20.08■□□□□ 0.81
SNHG17-207ENST00000449469 SETD1BQ9UPS6 1966 aaKnown RBP20.08■□□□□ 0.8
SNHG17-207ENST00000449469 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.8
SNHG17-207ENST00000449469 VPS37CA5D8V6 355 aaPredicted RBP20.08■□□□□ 0.8
SNHG17-207ENST00000449469 RPS6KB1P23443 525 aa20.08■□□□□ 0.8
SNHG17-207ENST00000449469 TPCN1Q9ULQ1 816 aa20.08■□□□□ 0.8
SNHG17-207ENST00000449469 PDIA6Q15084 440 aa20.07■□□□□ 0.8
SNHG17-207ENST00000449469 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
SNHG17-207ENST00000449469 FAM227BQ96M60 508 aa20.07■□□□□ 0.8
SNHG17-207ENST00000449469 SCN11AQ9UI33 1791 aa20.07■□□□□ 0.8
SNHG17-207ENST00000449469 GOLGA6L6A8MZA4 724 aa20.06■□□□□ 0.8
SNHG17-207ENST00000449469 USPL1Q5W0Q7 1092 aa20.06■□□□□ 0.8
SNHG17-207ENST00000449469 COPRSQ9NQ92 184 aa20.06■□□□□ 0.8
SNHG17-207ENST00000449469 NEURL1BA8MQ27 555 aa20.06■□□□□ 0.8
SNHG17-207ENST00000449469 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
SNHG17-207ENST00000449469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNHG17-207ENST00000449469 ZNF790Q6PG37 636 aa20.05■□□□□ 0.8
SNHG17-207ENST00000449469 METTL22Q9BUU2 404 aaPredicted RBP20.05■□□□□ 0.8
SNHG17-207ENST00000449469 SPTLC3Q9NUV7 552 aa20.05■□□□□ 0.8
SNHG17-207ENST00000449469 A0A0D9SFI3 127 aa20.05■□□□□ 0.8
SNHG17-207ENST00000449469 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
SNHG17-207ENST00000449469 ATP5JP18859 108 aa20.05■□□□□ 0.8
SNHG17-207ENST00000449469 GCKRQ14397 625 aa20.05■□□□□ 0.8
SNHG17-207ENST00000449469 ERBB3P21860 1342 aa20.04■□□□□ 0.8
SNHG17-207ENST00000449469 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
SNHG17-207ENST00000449469 CCDC8Q9H0W5 538 aaPredicted RBP20.04■□□□□ 0.8
SNHG17-207ENST00000449469 C5P01031 1676 aa20.04■□□□□ 0.8
SNHG17-207ENST00000449469 MAP3K11Q16584 847 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 FAM200AQ8TCP9 573 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 NUP62CLQ9H1M0 184 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 DDX19AQ9NUU7 478 aaKnown RBP20.03■□□□□ 0.8
SNHG17-207ENST00000449469 NOLC1Q14978 699 aaKnown RBP eCLIP20.03■□□□□ 0.81e-323■□□□□ 10.7
SNHG17-207ENST00000449469 GIMAP6Q6P9H5 292 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 MYRIPQ8NFW9 859 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 BOLA2Q9H3K6 86 aa20.03■□□□□ 0.8
SNHG17-207ENST00000449469 NECAB1Q8N987 351 aa20.02■□□□□ 0.8
SNHG17-207ENST00000449469 TTC6Q86TZ1 520 aa20.02■□□□□ 0.79
SNHG17-207ENST00000449469 RAPGEF4Q8WZA2 1011 aa20.02■□□□□ 0.79
SNHG17-207ENST00000449469 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.79
SNHG17-207ENST00000449469 PRAMEF22A3QJZ6 481 aa20.01■□□□□ 0.79
SNHG17-207ENST00000449469 TAF5LO75529 589 aa20.01■□□□□ 0.79
SNHG17-207ENST00000449469 CAVIN2O95810 425 aa20.01■□□□□ 0.79
SNHG17-207ENST00000449469 RABL6Q3YEC7 729 aaPredicted RBP20.01■□□□□ 0.79
SNHG17-207ENST00000449469 CDC37L1Q7L3B6 337 aa20.01■□□□□ 0.79
SNHG17-207ENST00000449469 AIMP1Q12904 312 aaKnown RBP20■□□□□ 0.79
SNHG17-207ENST00000449469 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
SNHG17-207ENST00000449469 TLR7Q9NYK1 1049 aaKnown RBP20■□□□□ 0.79
SNHG17-207ENST00000449469 KDM6AO15550 1401 aaPredicted RBP20■□□□□ 0.79
SNHG17-207ENST00000449469 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
SNHG17-207ENST00000449469 GTF2F1P35269 517 aaKnown RBP eCLIP20■□□□□ 0.79
SNHG17-207ENST00000449469 DNTTIP2Q5QJE6 756 aaKnown RBP20■□□□□ 0.79
SNHG17-207ENST00000449469 RBM43Q6ZSC3 357 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms