RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 KIF6Q6ZMV9 814 aa23.93■■□□□ 1.42
CHCHD3-203ENST00000448878 PSMD1Q99460 953 aa23.93■■□□□ 1.42
CHCHD3-203ENST00000448878 WDR33Q9C0J8 1336 aaKnown RBP23.92■■□□□ 1.42
CHCHD3-203ENST00000448878 RASSF10A6NK89 507 aa23.92■■□□□ 1.42
CHCHD3-203ENST00000448878 MYL6BP14649 208 aa23.92■■□□□ 1.42
CHCHD3-203ENST00000448878 LARGE2Q8N3Y3 721 aa23.92■■□□□ 1.42
CHCHD3-203ENST00000448878 MAP2K1Q02750 393 aaPredicted RBP23.91■■□□□ 1.42
CHCHD3-203ENST00000448878 CC2D2BQ6DHV5 1058 aa23.91■■□□□ 1.42
CHCHD3-203ENST00000448878 ABCC12Q96J65 1359 aa23.91■■□□□ 1.42
CHCHD3-203ENST00000448878 ERVV-1B6SEH8 477 aa23.9■■□□□ 1.42
CHCHD3-203ENST00000448878 ZBTB3Q9H5J0 574 aa23.9■■□□□ 1.42
CHCHD3-203ENST00000448878 DDX21Q9NR30 783 aaKnown RBP eCLIP23.9■■□□□ 1.42
CHCHD3-203ENST00000448878 MAP3K15Q6ZN16 1313 aa23.89■■□□□ 1.42
CHCHD3-203ENST00000448878 CRY2Q49AN0 593 aa23.89■■□□□ 1.41
CHCHD3-203ENST00000448878 TTLL7Q6ZT98 887 aa23.89■■□□□ 1.41
CHCHD3-203ENST00000448878 RBM17Q96I25 401 aaKnown RBP23.89■■□□□ 1.41
CHCHD3-203ENST00000448878 TMX4Q9H1E5 349 aaPredicted RBP23.89■■□□□ 1.41
CHCHD3-203ENST00000448878 ADAMTSL1Q8N6G6 1762 aa23.88■■□□□ 1.41
CHCHD3-203ENST00000448878 HSPA8P11142 646 aaKnown RBP23.88■■□□□ 1.41
CHCHD3-203ENST00000448878 EPS15P42566 896 aa23.88■■□□□ 1.41
CHCHD3-203ENST00000448878 FMR1Q06787 632 aaKnown RBP eCLIP23.88■■□□□ 1.412e-8■■■■■ 60
CHCHD3-203ENST00000448878 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
CHCHD3-203ENST00000448878 BEGAINQ9BUH8 593 aa23.88■■□□□ 1.41
CHCHD3-203ENST00000448878 SUSD4Q5VX71 490 aa23.87■■□□□ 1.41
CHCHD3-203ENST00000448878 PPEF1O14829 653 aaPredicted RBP23.86■■□□□ 1.41
CHCHD3-203ENST00000448878 NIM1KQ8IY84 436 aa23.86■■□□□ 1.41
CHCHD3-203ENST00000448878 GRIPAP1Q4V328 841 aa23.85■■□□□ 1.41
CHCHD3-203ENST00000448878 LAMB4A4D0S4 1761 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 PPIP5K2O43314 1243 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 HOXA10P31260 410 aaPredicted RBP23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 ECE1P42892 770 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 SCNN1DP51172 638 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 EIF4A1P60842 406 aaKnown RBP23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 CYP4F22Q6NT55 531 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 CAPNS2Q96L46 248 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 NUP98P52948 1817 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 UBN2Q6ZU65 1347 aa23.84■■□□□ 1.41
CHCHD3-203ENST00000448878 USP50Q70EL3 339 aaPredicted RBP23.83■■□□□ 1.41
CHCHD3-203ENST00000448878 PPP1R42Q7Z4L9 355 aa23.83■■□□□ 1.41
CHCHD3-203ENST00000448878 SLC51AQ86UW1 340 aa23.83■■□□□ 1.41
CHCHD3-203ENST00000448878 ABHD8Q96I13 439 aa23.83■■□□□ 1.41
CHCHD3-203ENST00000448878 CRAMP1Q96RY5 1269 aa23.83■■□□□ 1.41
CHCHD3-203ENST00000448878 THUMPD2Q9BTF0 503 aaKnown RBP23.83■■□□□ 1.41
CHCHD3-203ENST00000448878 COL4A5P29400 1685 aa23.83■■□□□ 1.4
CHCHD3-203ENST00000448878 TRAF5O00463 557 aa23.82■■□□□ 1.4
CHCHD3-203ENST00000448878 NLRP3Q96P20 1036 aa23.82■■□□□ 1.4
CHCHD3-203ENST00000448878 GPR101Q96P66 508 aaPredicted RBP23.82■■□□□ 1.4
CHCHD3-203ENST00000448878 SNED1Q8TER0 1413 aa23.82■■□□□ 1.4
CHCHD3-203ENST00000448878 AOC3Q16853 763 aa23.81■■□□□ 1.4
CHCHD3-203ENST00000448878 ZNF34Q8IZ26 560 aa23.8■■□□□ 1.4
CHCHD3-203ENST00000448878 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
CHCHD3-203ENST00000448878 NTSR2O95665 410 aa23.79■■□□□ 1.4
CHCHD3-203ENST00000448878 GIGYF2Q6Y7W6 1299 aaKnown RBP23.79■■□□□ 1.4
CHCHD3-203ENST00000448878 C3orf67Q6ZVT6 689 aa23.79■■□□□ 1.4
CHCHD3-203ENST00000448878 CCDC85CA6NKD9 419 aa23.78■■□□□ 1.4
CHCHD3-203ENST00000448878 EIF2S2P20042 333 aaKnown RBP23.78■■□□□ 1.4
CHCHD3-203ENST00000448878 CST9Q5W186 159 aa23.78■■□□□ 1.4
CHCHD3-203ENST00000448878 ADARB2Q9NS39 739 aaKnown RBP23.78■■□□□ 1.4
CHCHD3-203ENST00000448878 IBTKQ9P2D0 1353 aaPredicted RBP23.78■■□□□ 1.4
CHCHD3-203ENST00000448878 FAM161AQ3B820 660 aa23.77■■□□□ 1.4
CHCHD3-203ENST00000448878 PARP10Q53GL7 1025 aa23.77■■□□□ 1.4
CHCHD3-203ENST00000448878 TSKSQ9UJT2 592 aa23.77■■□□□ 1.4
CHCHD3-203ENST00000448878 DLG5Q8TDM6 1919 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 KDM3BQ7LBC6 1761 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 AOC2O75106 756 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 NFE2L2Q16236 605 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 SUPT20HQ8NEM7 779 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 UTP14AQ9BVJ6 771 aaKnown RBP23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 GPRC5DQ9NZD1 345 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 ATP6V0A2Q9Y487 856 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 TLL2Q9Y6L7 1015 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 MAPK8IP3Q9UPT6 1336 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 RIC1Q4ADV7 1423 aa23.76■■□□□ 1.39
CHCHD3-203ENST00000448878 CXCL9Q07325 125 aa23.75■■□□□ 1.39
CHCHD3-203ENST00000448878 BCL2L13Q9BXK5 485 aa23.75■■□□□ 1.39
CHCHD3-203ENST00000448878 ZNF408Q9H9D4 720 aa23.75■■□□□ 1.39
CHCHD3-203ENST00000448878 TSPYL4Q9UJ04 414 aa23.75■■□□□ 1.39
CHCHD3-203ENST00000448878 ZNRF3Q9ULT6 936 aa23.75■■□□□ 1.39
CHCHD3-203ENST00000448878 CELF2O95319 508 aaKnown RBP23.74■■□□□ 1.39
CHCHD3-203ENST00000448878 DPP8Q6V1X1 898 aaPredicted RBP23.74■■□□□ 1.39
CHCHD3-203ENST00000448878 GMPSP49915 693 aaPredicted RBP23.73■■□□□ 1.39
CHCHD3-203ENST00000448878 CFAP44Q96MT7 982 aa23.73■■□□□ 1.39
CHCHD3-203ENST00000448878 PLEKHF1Q96S99 279 aa23.73■■□□□ 1.39
CHCHD3-203ENST00000448878 VPS33BQ9H267 617 aa23.73■■□□□ 1.39
CHCHD3-203ENST00000448878 PNNQ9H307 717 aaKnown RBP23.73■■□□□ 1.39
CHCHD3-203ENST00000448878 TRPM7Q96QT4 1865 aa23.73■■□□□ 1.39
CHCHD3-203ENST00000448878 ANXA1P04083 346 aa23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 CIAPIN1Q6FI81 312 aa23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 MPNDQ8N594 471 aa23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 NECTIN2Q92692 538 aa23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 GLIS2Q9BZE0 524 aaPredicted RBP23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 ABCC4O15439 1325 aa23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 ERBB4Q15303 1308 aa23.72■■□□□ 1.39
CHCHD3-203ENST00000448878 RAD17O75943 681 aa23.71■■□□□ 1.39
CHCHD3-203ENST00000448878 MAP2K2P36507 400 aa23.71■■□□□ 1.39
CHCHD3-203ENST00000448878 HCLS1P14317 486 aaPredicted RBP23.7■■□□□ 1.38
CHCHD3-203ENST00000448878 SLC10A5Q5PT55 438 aa23.7■■□□□ 1.38
CHCHD3-203ENST00000448878 BBOX1O75936 387 aa23.69■■□□□ 1.38
CHCHD3-203ENST00000448878 TNIP1Q15025 636 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms