RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 RIC1Q4ADV7 1423 aa25.59■■□□□ 1.69
VCP-203ENST00000448530 NTSR2O95665 410 aa25.58■■□□□ 1.69
VCP-203ENST00000448530 RTKN2Q8IZC4 609 aa25.58■■□□□ 1.69
VCP-203ENST00000448530 UTP14AQ9BVJ6 771 aaKnown RBP25.58■■□□□ 1.69
VCP-203ENST00000448530 IFT57Q9NWB7 429 aa25.58■■□□□ 1.69
VCP-203ENST00000448530 DBF4Q9UBU7 674 aaPredicted RBP25.58■■□□□ 1.69
VCP-203ENST00000448530 ANKRD36CQ5JPF3 1778 aa25.58■■□□□ 1.69
VCP-203ENST00000448530 ANP32CO43423 234 aa25.57■■□□□ 1.68
VCP-203ENST00000448530 VEGFAP15692 232 aaPredicted RBP25.57■■□□□ 1.68
VCP-203ENST00000448530 DUSP27Q5VZP5 1158 aa25.57■■□□□ 1.68
VCP-203ENST00000448530 ZNF853P0CG23 659 aa25.55■■□□□ 1.68
VCP-203ENST00000448530 FKBP4Q02790 459 aaKnown RBP eCLIP25.55■■□□□ 1.68
VCP-203ENST00000448530 RBM17Q96I25 401 aaKnown RBP25.55■■□□□ 1.68
VCP-203ENST00000448530 NLRP3Q96P20 1036 aa25.55■■□□□ 1.68
VCP-203ENST00000448530 RNF123Q5XPI4 1314 aa25.55■■□□□ 1.68
VCP-203ENST00000448530 FSTL1Q12841 308 aa25.54■■□□□ 1.68
VCP-203ENST00000448530 CCDC184Q52MB2 194 aa25.54■■□□□ 1.68
VCP-203ENST00000448530 HYPKQ9NX55 129 aa25.54■■□□□ 1.68
VCP-203ENST00000448530 HOXA10P31260 410 aaPredicted RBP25.53■■□□□ 1.68
VCP-203ENST00000448530 APLP1P51693 650 aa25.53■■□□□ 1.68
VCP-203ENST00000448530 TCIRG1Q13488 830 aa25.53■■□□□ 1.68
VCP-203ENST00000448530 CC2D2BQ6DHV5 1058 aa25.52■■□□□ 1.68
VCP-203ENST00000448530 OLFM4Q6UX06 510 aa25.52■■□□□ 1.68
VCP-203ENST00000448530 NLRP10Q86W26 655 aa25.52■■□□□ 1.68
VCP-203ENST00000448530 PLBD2Q8NHP8 589 aa25.52■■□□□ 1.68
VCP-203ENST00000448530 MRS2Q9HD23 443 aa25.52■■□□□ 1.68
VCP-203ENST00000448530 CEP350Q5VT06 3117 aa25.52■■□□□ 1.68
VCP-203ENST00000448530 ANKRD13DQ6ZTN6 518 aa25.51■■□□□ 1.67
VCP-203ENST00000448530 CRAMP1Q96RY5 1269 aa25.51■■□□□ 1.67
VCP-203ENST00000448530 TMX4Q9H1E5 349 aaPredicted RBP25.51■■□□□ 1.67
VCP-203ENST00000448530 ZNF277Q9NRM2 450 aaPredicted RBP25.51■■□□□ 1.67
VCP-203ENST00000448530 TRMT112Q9UI30 125 aaKnown RBP25.51■■□□□ 1.67
VCP-203ENST00000448530 SLC10A5Q5PT55 438 aa25.5■■□□□ 1.67
VCP-203ENST00000448530 SMC1BQ8NDV3 1235 aa25.5■■□□□ 1.67
VCP-203ENST00000448530 CHMP4AQ9BY43 222 aa25.5■■□□□ 1.67
VCP-203ENST00000448530 WDR90Q96KV7 1748 aa25.49■■□□□ 1.67
VCP-203ENST00000448530 ELL2O00472 640 aaPredicted RBP25.49■■□□□ 1.67
VCP-203ENST00000448530 GRIPAP1Q4V328 841 aa25.49■■□□□ 1.67
VCP-203ENST00000448530 SYNE4Q8N205 404 aa25.49■■□□□ 1.67
VCP-203ENST00000448530 SH3TC1Q8TE82 1336 aa25.48■■□□□ 1.67
VCP-203ENST00000448530 PPEF1O14829 653 aaPredicted RBP25.48■■□□□ 1.67
VCP-203ENST00000448530 IARSP41252 1262 aaKnown RBP25.47■■□□□ 1.67
VCP-203ENST00000448530 C3orf67Q6ZVT6 689 aa25.47■■□□□ 1.67
VCP-203ENST00000448530 PSMD1Q99460 953 aa25.47■■□□□ 1.67
VCP-203ENST00000448530 TCERG1O14776 1098 aaKnown RBP25.46■■□□□ 1.67
VCP-203ENST00000448530 DDNO94850 711 aaPredicted RBP25.46■■□□□ 1.67
VCP-203ENST00000448530 GOLGA2Q08379 1002 aa25.46■■□□□ 1.67
VCP-203ENST00000448530 HCLS1P14317 486 aaPredicted RBP25.45■■□□□ 1.66
VCP-203ENST00000448530 CCDC27Q2M243 656 aa25.44■■□□□ 1.66
VCP-203ENST00000448530 RIC3Q7Z5B4 369 aa25.44■■□□□ 1.66
VCP-203ENST00000448530 C8orf58Q8NAV2 365 aa25.44■■□□□ 1.66
VCP-203ENST00000448530 JDP2Q8WYK2 163 aa25.44■■□□□ 1.66
VCP-203ENST00000448530 LAMB2P55268 1798 aa25.44■■□□□ 1.66
VCP-203ENST00000448530 ATP5J2-PTCD1G3V325 749 aa25.43■■□□□ 1.66
VCP-203ENST00000448530 CCDC30Q5VVM6 783 aa25.43■■□□□ 1.66
VCP-203ENST00000448530 IQCA1LA6NCM1 817 aa25.42■■□□□ 1.66
VCP-203ENST00000448530 POTECB2RU33 542 aa25.42■■□□□ 1.66
VCP-203ENST00000448530 DDX46Q7L014 1031 aaKnown RBP25.42■■□□□ 1.66
VCP-203ENST00000448530 WWC1Q8IX03 1113 aa25.42■■□□□ 1.66
VCP-203ENST00000448530 ZNF428Q96B54 188 aa25.42■■□□□ 1.66
VCP-203ENST00000448530 ISCA1Q9BUE6 129 aa25.42■■□□□ 1.66
VCP-203ENST00000448530 ABCC4O15439 1325 aa25.41■■□□□ 1.66
VCP-203ENST00000448530 SNED1Q8TER0 1413 aa25.4■■□□□ 1.66
VCP-203ENST00000448530 BBOX1O75936 387 aa25.4■■□□□ 1.66
VCP-203ENST00000448530 TSR2Q969E8 191 aaKnown RBP25.4■■□□□ 1.66
VCP-203ENST00000448530 PHAXQ9H814 394 aaKnown RBP25.4■■□□□ 1.66
VCP-203ENST00000448530 ATP6V0A2Q9Y487 856 aa25.4■■□□□ 1.66
VCP-203ENST00000448530 ZNF541Q9H0D2 1346 aa25.39■■□□□ 1.66
VCP-203ENST00000448530 DDX58O95786 925 aaKnown RBP25.39■■□□□ 1.66
VCP-203ENST00000448530 LARGE2Q8N3Y3 721 aa25.39■■□□□ 1.66
VCP-203ENST00000448530 FAM89AQ96GI7 184 aa25.39■■□□□ 1.66
VCP-203ENST00000448530 SCN4AP35499 1836 aa25.38■■□□□ 1.65
VCP-203ENST00000448530 TRIM28Q13263 835 aaKnown RBP25.38■■□□□ 1.65
VCP-203ENST00000448530 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
VCP-203ENST00000448530 L3MBTL3Q96JM7 780 aaPredicted RBP25.38■■□□□ 1.65
VCP-203ENST00000448530 IL16Q14005 1332 aa25.37■■□□□ 1.65
VCP-203ENST00000448530 FZD9O00144 591 aa25.37■■□□□ 1.65
VCP-203ENST00000448530 EIF6P56537 245 aaKnown RBP25.37■■□□□ 1.65
VCP-203ENST00000448530 STK31Q9BXU1 1019 aa25.37■■□□□ 1.65
VCP-203ENST00000448530 DDX60Q8IY21 1712 aaKnown RBP25.37■■□□□ 1.65
VCP-203ENST00000448530 GRAPQ13588 217 aa25.36■■□□□ 1.65
VCP-203ENST00000448530 RTL5Q5HYW3 569 aaPredicted RBP25.36■■□□□ 1.65
VCP-203ENST00000448530 TSPYL6Q8N831 410 aa25.36■■□□□ 1.65
VCP-203ENST00000448530 SUPT20HQ8NEM7 779 aa25.36■■□□□ 1.65
VCP-203ENST00000448530 GRAPLQ8TC17 118 aaPredicted RBP25.36■■□□□ 1.65
VCP-203ENST00000448530 HSP90B1P14625 803 aaKnown RBP25.35■■□□□ 1.65
VCP-203ENST00000448530 SP8Q8IXZ3 490 aa25.35■■□□□ 1.65
VCP-203ENST00000448530 GPC2Q8N158 579 aa25.35■■□□□ 1.65
VCP-203ENST00000448530 MYD88Q99836 296 aa25.35■■□□□ 1.65
VCP-203ENST00000448530 PPIP5K2O43314 1243 aa25.34■■□□□ 1.65
VCP-203ENST00000448530 CHADLQ6NUI6 762 aa25.34■■□□□ 1.65
VCP-203ENST00000448530 DPP8Q6V1X1 898 aaPredicted RBP25.34■■□□□ 1.65
VCP-203ENST00000448530 TMC4Q7Z404 712 aa25.34■■□□□ 1.65
VCP-203ENST00000448530 NIM1KQ8IY84 436 aa25.34■■□□□ 1.65
VCP-203ENST00000448530 HACL1Q9UJ83 578 aa25.34■■□□□ 1.65
VCP-203ENST00000448530 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
VCP-203ENST00000448530 IRS4O14654 1257 aaPredicted RBP25.33■■□□□ 1.65
VCP-203ENST00000448530 HTRA3P83110 453 aa25.33■■□□□ 1.65
VCP-203ENST00000448530 TWISTNBQ3B726 338 aaPredicted RBP25.33■■□□□ 1.65
VCP-203ENST00000448530 SLC51AQ86UW1 340 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms