RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 L3MBTL3Q96JM7 780 aaPredicted RBP18.64■□□□□ 0.57
CDK3-202ENST00000448471 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
CDK3-202ENST00000448471 TAF1DQ9H5J8 278 aaPredicted RBP18.64■□□□□ 0.57
CDK3-202ENST00000448471 SIPA1L3O60292 1781 aaPredicted RBP18.63■□□□□ 0.57
CDK3-202ENST00000448471 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
CDK3-202ENST00000448471 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
CDK3-202ENST00000448471 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
CDK3-202ENST00000448471 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
CDK3-202ENST00000448471 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
CDK3-202ENST00000448471 HTATSF1O43719 755 aaKnown RBP18.61■□□□□ 0.57
CDK3-202ENST00000448471 C20orf194Q5TEA3 1177 aa18.61■□□□□ 0.57
CDK3-202ENST00000448471 C7orf43Q8WVR3 580 aa18.61■□□□□ 0.57
CDK3-202ENST00000448471 TMEM88BA6NKF7 163 aa18.6■□□□□ 0.57
CDK3-202ENST00000448471 VEGFBP49765 207 aa18.6■□□□□ 0.57
CDK3-202ENST00000448471 EAPPQ56P03 285 aaPredicted RBP18.6■□□□□ 0.57
CDK3-202ENST00000448471 AIDAQ96BJ3 306 aa18.6■□□□□ 0.57
CDK3-202ENST00000448471 SCN4AP35499 1836 aa18.6■□□□□ 0.57
CDK3-202ENST00000448471 CEMIPQ8WUJ3 1361 aa18.6■□□□□ 0.57
CDK3-202ENST00000448471 KCNQ3O43525 872 aa18.59■□□□□ 0.57
CDK3-202ENST00000448471 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
CDK3-202ENST00000448471 CTCFP49711 727 aaPredicted RBP18.59■□□□□ 0.57
CDK3-202ENST00000448471 NBPF5PQ86XG9 351 aaPredicted RBP18.59■□□□□ 0.57
CDK3-202ENST00000448471 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
CDK3-202ENST00000448471 ZNF541Q9H0D2 1346 aa18.59■□□□□ 0.57
CDK3-202ENST00000448471 BTBD11A6QL63 1104 aa18.59■□□□□ 0.57
CDK3-202ENST00000448471 ITGBL1O95965 494 aaPredicted RBP18.59■□□□□ 0.57
CDK3-202ENST00000448471 FKBP4Q02790 459 aaKnown RBP eCLIP18.59■□□□□ 0.577e-6■□□□□ 9.9
CDK3-202ENST00000448471 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
CDK3-202ENST00000448471 NPR1P16066 1061 aa18.58■□□□□ 0.56
CDK3-202ENST00000448471 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
CDK3-202ENST00000448471 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.56
CDK3-202ENST00000448471 ZNF277Q9NRM2 450 aaPredicted RBP18.58■□□□□ 0.56
CDK3-202ENST00000448471 HACL1Q9UJ83 578 aa18.58■□□□□ 0.56
CDK3-202ENST00000448471 CLEC11AQ9Y240 323 aa18.58■□□□□ 0.56
CDK3-202ENST00000448471 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
CDK3-202ENST00000448471 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
CDK3-202ENST00000448471 EPHX2P34913 555 aa18.56■□□□□ 0.56
CDK3-202ENST00000448471 BRPF1P55201 1214 aaPredicted RBP18.56■□□□□ 0.56
CDK3-202ENST00000448471 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
CDK3-202ENST00000448471 WBP1LQ9NX94 342 aa18.56■□□□□ 0.56
CDK3-202ENST00000448471 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
CDK3-202ENST00000448471 ADAMTSL1Q8N6G6 1762 aa18.56■□□□□ 0.56
CDK3-202ENST00000448471 PRAMEF22A3QJZ6 481 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 KLRG2A4D1S0 409 aaPredicted RBP18.55■□□□□ 0.56
CDK3-202ENST00000448471 CHL1O00533 1208 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 OLFM4Q6UX06 510 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 MS4A1P11836 297 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 AAMPQ13685 434 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 TPTE2Q6XPS3 522 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 RTKN2Q8IZC4 609 aa18.55■□□□□ 0.56
CDK3-202ENST00000448471 LBX1P52954 281 aa18.54■□□□□ 0.56
CDK3-202ENST00000448471 PNMA8AQ86V59 439 aaPredicted RBP18.54■□□□□ 0.56
CDK3-202ENST00000448471 SSH1Q8WYL5 1049 aa18.54■□□□□ 0.56
CDK3-202ENST00000448471 SMC4Q9NTJ3 1288 aa18.54■□□□□ 0.56
CDK3-202ENST00000448471 NIP7Q9Y221 180 aaKnown RBP eCLIP18.54■□□□□ 0.56
CDK3-202ENST00000448471 RASSF10A6NK89 507 aa18.53■□□□□ 0.56
CDK3-202ENST00000448471 IARSP41252 1262 aaKnown RBP18.53■□□□□ 0.56
CDK3-202ENST00000448471 DEFB115Q30KQ5 88 aa18.53■□□□□ 0.56
CDK3-202ENST00000448471 MAP1SQ66K74 1059 aaPredicted RBP18.53■□□□□ 0.56
CDK3-202ENST00000448471 MCM10Q7L590 875 aa18.53■□□□□ 0.56
CDK3-202ENST00000448471 FAM177BA6PVY3 158 aa18.52■□□□□ 0.56
CDK3-202ENST00000448471 FZD9O00144 591 aa18.52■□□□□ 0.56
CDK3-202ENST00000448471 VAMP4O75379 141 aa18.52■□□□□ 0.56
CDK3-202ENST00000448471 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
CDK3-202ENST00000448471 ZKSCAN2Q63HK3 967 aa18.52■□□□□ 0.56
CDK3-202ENST00000448471 CNTROBQ8N137 903 aa18.52■□□□□ 0.56
CDK3-202ENST00000448471 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
CDK3-202ENST00000448471 KIF16BQ96L93 1317 aa18.52■□□□□ 0.55
CDK3-202ENST00000448471 SYNE4Q8N205 404 aa18.51■□□□□ 0.55
CDK3-202ENST00000448471 BCL2L13Q9BXK5 485 aa18.51■□□□□ 0.55
CDK3-202ENST00000448471 RGL2O15211 777 aa18.51■□□□□ 0.55
CDK3-202ENST00000448471 HSPA8P11142 646 aaKnown RBP18.51■□□□□ 0.55
CDK3-202ENST00000448471 ALDH1B1P30837 517 aa18.51■□□□□ 0.55
CDK3-202ENST00000448471 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
CDK3-202ENST00000448471 IPO8O15397 1037 aaKnown RBP18.5■□□□□ 0.55
CDK3-202ENST00000448471 TWISTNBQ3B726 338 aaPredicted RBP18.5■□□□□ 0.55
CDK3-202ENST00000448471 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
CDK3-202ENST00000448471 GPC2Q8N158 579 aa18.5■□□□□ 0.55
CDK3-202ENST00000448471 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
CDK3-202ENST00000448471 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
CDK3-202ENST00000448471 ABT1Q9ULW3 272 aaKnown RBP18.5■□□□□ 0.55
CDK3-202ENST00000448471 WDR33Q9C0J8 1336 aaKnown RBP18.49■□□□□ 0.55
CDK3-202ENST00000448471 GTF2E1P29083 439 aaPredicted RBP18.49■□□□□ 0.55
CDK3-202ENST00000448471 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
CDK3-202ENST00000448471 SNED1Q8TER0 1413 aa18.48■□□□□ 0.55
CDK3-202ENST00000448471 MAP2K1Q02750 393 aaPredicted RBP18.48■□□□□ 0.55
CDK3-202ENST00000448471 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
CDK3-202ENST00000448471 JDP2Q8WYK2 163 aa18.48■□□□□ 0.55
CDK3-202ENST00000448471 PSMD1Q99460 953 aa18.48■□□□□ 0.55
CDK3-202ENST00000448471 HLFQ16534 295 aa18.47■□□□□ 0.55
CDK3-202ENST00000448471 ATF7IPQ6VMQ6 1270 aa18.47■□□□□ 0.55
CDK3-202ENST00000448471 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
CDK3-202ENST00000448471 C8orf58Q8NAV2 365 aa18.47■□□□□ 0.55
CDK3-202ENST00000448471 ABHD8Q96I13 439 aa18.47■□□□□ 0.55
CDK3-202ENST00000448471 ARHGAP45Q92619 1136 aa18.47■□□□□ 0.55
CDK3-202ENST00000448471 DDX21Q9NR30 783 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDK3-202ENST00000448471 ABCC12Q96J65 1359 aa18.46■□□□□ 0.55
CDK3-202ENST00000448471 RLBP1P12271 317 aa18.46■□□□□ 0.55
CDK3-202ENST00000448471 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms