RNA–Protein interactions for RNA: ENST00000447393.5

PACS2-203, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 6,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-203ENST00000447393 IQSEC3Q9UPP2 1182 aaPredicted RBP20.38■□□□□ 0.85
PACS2-203ENST00000447393 CTNNA2P26232 953 aa20.38■□□□□ 0.85
PACS2-203ENST00000447393 CRNKL1Q9BZJ0 848 aaKnown RBP20.38■□□□□ 0.85
PACS2-203ENST00000447393 F8W031 263 aaPredicted RBP20.38■□□□□ 0.85
PACS2-203ENST00000447393 USO1O60763 962 aaKnown RBP20.38■□□□□ 0.85
PACS2-203ENST00000447393 CTAGE5O15320 804 aa20.37■□□□□ 0.85
PACS2-203ENST00000447393 UBA7P41226 1012 aa20.37■□□□□ 0.85
PACS2-203ENST00000447393 CCDC91Q7Z6B0 441 aa20.37■□□□□ 0.85
PACS2-203ENST00000447393 FERMT2Q96AC1 680 aa20.37■□□□□ 0.85
PACS2-203ENST00000447393 ISM2Q6H9L7 571 aa20.37■□□□□ 0.85
PACS2-203ENST00000447393 TMCO3Q6UWJ1 677 aa20.36■□□□□ 0.85
PACS2-203ENST00000447393 ATP6V1AP38606 617 aa20.36■□□□□ 0.85
PACS2-203ENST00000447393 GBP3Q9H0R5 595 aa20.36■□□□□ 0.85
PACS2-203ENST00000447393 PUF60Q9UHX1 559 aaKnown RBP20.36■□□□□ 0.85
PACS2-203ENST00000447393 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 IFFO1Q0D2I5 559 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 TBC1D9Q6ZT07 1266 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 UQCRFS1P1P0C7P4 283 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 ABCC5O15440 1437 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 HOOK3Q86VS8 718 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 IQGAP2Q13576 1575 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 KIF2AO00139 706 aaPredicted RBP20.35■□□□□ 0.85
PACS2-203ENST00000447393 PRC1O43663 620 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 MAP2K1Q02750 393 aaPredicted RBP20.35■□□□□ 0.85
PACS2-203ENST00000447393 TRMT1Q9NXH9 659 aaKnown RBP20.35■□□□□ 0.85
PACS2-203ENST00000447393 GSTO1P78417 241 aa20.35■□□□□ 0.85
PACS2-203ENST00000447393 ZCRB1Q8TBF4 217 aaKnown RBP20.35■□□□□ 0.85
PACS2-203ENST00000447393 PAFAH1B1P43034 410 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 DRC1Q96MC2 740 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 SETDB2Q96T68 719 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 TMCO5BA8MYB1 307 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 STX6O43752 255 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 KIF18AQ8NI77 898 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 TSPY3P0CV98 308 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 TSPY8P0CW00 308 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
PACS2-203ENST00000447393 CYP7A1P22680 504 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 GRM1Q13255 1194 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 STXBP4Q6ZWJ1 553 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 USP25Q9UHP3 1055 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 MMRN2Q9H8L6 949 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 DDX19AQ9NUU7 478 aaKnown RBP20.33■□□□□ 0.85
PACS2-203ENST00000447393 ERICH4A6NGS2 130 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 ZSCAN30Q86W11 494 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 BICD1Q96G01 975 aa20.33■□□□□ 0.85
PACS2-203ENST00000447393 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
PACS2-203ENST00000447393 KIF14Q15058 1648 aa20.33■□□□□ 0.84
PACS2-203ENST00000447393 TNPO1Q92973 898 aaKnown RBP20.32■□□□□ 0.84
PACS2-203ENST00000447393 BCCIPQ9P287 314 aaKnown RBP eCLIP20.32■□□□□ 0.84
PACS2-203ENST00000447393 PRPF4BQ13523 1007 aaKnown RBP20.32■□□□□ 0.84
PACS2-203ENST00000447393 WTAPQ15007 396 aa20.32■□□□□ 0.84
PACS2-203ENST00000447393 TMC6Q7Z403 805 aa20.32■□□□□ 0.84
PACS2-203ENST00000447393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.32■□□□□ 0.845e-7■■■■■ 124.4
PACS2-203ENST00000447393 PDCL2Q8N4E4 241 aa20.32■□□□□ 0.84
PACS2-203ENST00000447393 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
PACS2-203ENST00000447393 WWC3Q9ULE0 1092 aa20.32■□□□□ 0.84
PACS2-203ENST00000447393 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
PACS2-203ENST00000447393 PICALMQ13492 652 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 COPS6Q7L5N1 327 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 MCM5P33992 734 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 RHPN1Q8TCX5 695 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 UBAP1LF5GYI3 381 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 MAP9Q49MG5 647 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 MSH6P52701 1360 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
PACS2-203ENST00000447393 NOP2P46087 812 aaKnown RBP20.31■□□□□ 0.84
PACS2-203ENST00000447393 TBCAO75347 108 aaKnown RBP20.3■□□□□ 0.84
PACS2-203ENST00000447393 DENND4BO75064 1496 aaPredicted RBP20.3■□□□□ 0.84
PACS2-203ENST00000447393 SCAF11Q99590 1463 aaKnown RBP20.3■□□□□ 0.84
PACS2-203ENST00000447393 HMG20BQ9P0W2 317 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 COMMD10Q9Y6G5 202 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 LRRC2Q9BYS8 371 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 NSD2O96028 1365 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 STX1AQ16623 288 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 BRF1Q92994 677 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 ATP2B3Q16720 1220 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 TTC22Q5TAA0 569 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 NLRP3Q96P20 1036 aa20.3■□□□□ 0.84
PACS2-203ENST00000447393 GOLGA6L10A0A0M3HER8 536 aa20.29■□□□□ 0.84
PACS2-203ENST00000447393 MPHOSPH6Q99547 160 aaKnown RBP20.29■□□□□ 0.84
PACS2-203ENST00000447393 IFIT1BQ5T764 474 aaKnown RBP20.29■□□□□ 0.84
PACS2-203ENST00000447393 CCDC102BQ68D86 513 aa20.29■□□□□ 0.84
PACS2-203ENST00000447393 CCDC174Q6PII3 467 aa20.29■□□□□ 0.84
PACS2-203ENST00000447393 ALS2CR12Q96Q35 445 aa20.29■□□□□ 0.84
PACS2-203ENST00000447393 PSMD1Q99460 953 aa20.29■□□□□ 0.84
PACS2-203ENST00000447393 HDAC9Q9UKV0 1011 aa20.29■□□□□ 0.84
PACS2-203ENST00000447393 NIP7Q9Y221 180 aaKnown RBP eCLIP20.29■□□□□ 0.84
PACS2-203ENST00000447393 UBE4AQ14139 1066 aa20.28■□□□□ 0.84
PACS2-203ENST00000447393 FAM114A1Q8IWE2 563 aa20.28■□□□□ 0.84
PACS2-203ENST00000447393 HLTFQ14527 1009 aaKnown RBP eCLIP20.28■□□□□ 0.849e-7■■■□□ 17.9
PACS2-203ENST00000447393 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
PACS2-203ENST00000447393 SPECC1Q5M775 1068 aa20.28■□□□□ 0.84
PACS2-203ENST00000447393 NECAB1Q8N987 351 aa20.28■□□□□ 0.84
PACS2-203ENST00000447393 CLEC11AQ9Y240 323 aa20.28■□□□□ 0.84
PACS2-203ENST00000447393 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms