RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ATP4AP20648 1035 aa12.09□□□□□ -0.47
SMARCE1-206ENST00000447024 BAG6P46379 1132 aa12.09□□□□□ -0.47
SMARCE1-206ENST00000447024 GRIN2CQ14957 1233 aa12.09□□□□□ -0.47
SMARCE1-206ENST00000447024 FIGNL1Q6PIW4 674 aa12.09□□□□□ -0.47
SMARCE1-206ENST00000447024 SUV39H2Q9H5I1 410 aa12.09□□□□□ -0.47
SMARCE1-206ENST00000447024 SPAG9O60271 1321 aaKnown RBP12.09□□□□□ -0.47
SMARCE1-206ENST00000447024 AGLP35573 1532 aa12.08□□□□□ -0.48
SMARCE1-206ENST00000447024 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
SMARCE1-206ENST00000447024 ZCCHC2Q9C0B9 1178 aaKnown RBP12.08□□□□□ -0.48
SMARCE1-206ENST00000447024 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 ARAFP10398 606 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 EPXP11678 715 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 HNRNPMP52272 730 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 XP32Q5T750 250 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 C1orf216Q8TAB5 229 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 DIP2CQ9Y2E4 1556 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 PCDHGC4Q9Y5F7 938 aa12.07□□□□□ -0.48
SMARCE1-206ENST00000447024 MIA2Q96PC5 1412 aa12.06□□□□□ -0.48
SMARCE1-206ENST00000447024 NLRP8Q86W28 1048 aa12.06□□□□□ -0.48
SMARCE1-206ENST00000447024 NIFKQ9BYG3 293 aaKnown RBP12.06□□□□□ -0.48
SMARCE1-206ENST00000447024 PTPRMP28827 1452 aa12.06□□□□□ -0.48
SMARCE1-206ENST00000447024 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 NEURL1BA8MQ27 555 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 SMTNP53814 917 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 PLPP7Q8NBV4 271 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 BTBD6Q96KE9 485 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 MBD5Q9P267 1494 aa12.05□□□□□ -0.48
SMARCE1-206ENST00000447024 GNB5O14775 395 aa12.04□□□□□ -0.48
SMARCE1-206ENST00000447024 DGKGP49619 791 aa12.04□□□□□ -0.48
SMARCE1-206ENST00000447024 MAP7D1Q3KQU3 841 aa12.04□□□□□ -0.48
SMARCE1-206ENST00000447024 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
SMARCE1-206ENST00000447024 ABCA6Q8N139 1617 aa12.04□□□□□ -0.48
SMARCE1-206ENST00000447024 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
SMARCE1-206ENST00000447024 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
SMARCE1-206ENST00000447024 ATXN7O15265 892 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-206ENST00000447024 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
SMARCE1-206ENST00000447024 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
SMARCE1-206ENST00000447024 MADDQ8WXG6 1647 aa12.03□□□□□ -0.48
SMARCE1-206ENST00000447024 CAMSAP2Q08AD1 1489 aa12.02□□□□□ -0.48
SMARCE1-206ENST00000447024 CCDC141Q6ZP82 1450 aa12.02□□□□□ -0.48
SMARCE1-206ENST00000447024 ARHGEF5Q12774 1597 aa12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 DCDC2BA2VCK2 349 aa12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 PIK3R2O00459 728 aa12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 ABL2P42684 1182 aa12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 ZNF295-AS1Q8N0V1 137 aa12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 SERTAD1Q9UHV2 236 aa12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 ZNF644Q9H582 1327 aaPredicted RBP12.02□□□□□ -0.49
SMARCE1-206ENST00000447024 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
SMARCE1-206ENST00000447024 A0A1W2PNR3 127 aa12.01□□□□□ -0.49
SMARCE1-206ENST00000447024 MAPTP10636 758 aaKnown RBP12.01□□□□□ -0.49
SMARCE1-206ENST00000447024 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
SMARCE1-206ENST00000447024 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
SMARCE1-206ENST00000447024 TMEM229AB2RXF0 380 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 FURINP09958 794 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 TSPY4P0CV99 314 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 TSPY10P0CW01 314 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 TNP2Q05952 138 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 USP3Q9Y6I4 520 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 A2MP01023 1474 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
SMARCE1-206ENST00000447024 CD33P20138 364 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 NBPF1Q3BBV0 1214 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 FAM182BQ5T319 152 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 CHSY3Q70JA7 882 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 SLC4A9Q96Q91 983 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 KLF15Q9UIH9 416 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 IQSEC3Q9UPP2 1182 aaPredicted RBP11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 RIMS1Q86UR5 1692 aaKnown RBP11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 ADGBQ8N7X0 1667 aa11.99□□□□□ -0.49
SMARCE1-206ENST00000447024 KHNYNO15037 678 aaKnown RBP11.98□□□□□ -0.49
SMARCE1-206ENST00000447024 ADH6P28332 368 aa11.98□□□□□ -0.49
SMARCE1-206ENST00000447024 MLECQ14165 292 aa11.98□□□□□ -0.49
SMARCE1-206ENST00000447024 MTFR1Q15390 333 aa11.98□□□□□ -0.49
SMARCE1-206ENST00000447024 WASHC4Q2M389 1173 aa11.98□□□□□ -0.49
SMARCE1-206ENST00000447024 DHX29Q7Z478 1369 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 A6NJY4 79 aa11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 C1QTNF9BB2RNN3 333 aa11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 SEMA3FQ13275 785 aa11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 FCHSD1Q86WN1 690 aa11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 ZDHHC3Q9NYG2 299 aa11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 NOP53Q9NZM5 478 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-206ENST00000447024 CDK2AP1O14519 115 aa11.96□□□□□ -0.49
SMARCE1-206ENST00000447024 TATP17735 454 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-206ENST00000447024 CD163Q86VB7 1156 aa11.96□□□□□ -0.49
SMARCE1-206ENST00000447024 ZIC5Q96T25 663 aa11.96□□□□□ -0.49
SMARCE1-206ENST00000447024 AVENQ9NQS1 362 aaPredicted RBP11.96□□□□□ -0.49
SMARCE1-206ENST00000447024 CABP1Q9NZU7 370 aa11.96□□□□□ -0.49
SMARCE1-206ENST00000447024 MAST1Q9Y2H9 1570 aa11.96□□□□□ -0.5
SMARCE1-206ENST00000447024 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.5
SMARCE1-206ENST00000447024 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
SMARCE1-206ENST00000447024 SOX11P35716 441 aa11.95□□□□□ -0.5
SMARCE1-206ENST00000447024 CHRNA4P43681 627 aa11.95□□□□□ -0.5
SMARCE1-206ENST00000447024 FGD6Q6ZV73 1430 aa11.94□□□□□ -0.5
SMARCE1-206ENST00000447024 PIK3CDO00329 1044 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms