RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 CD2BP2O95400 341 aaKnown RBP9.04□□□□□ -0.96
SMG1-202ENST00000446231 WASF1Q92558 559 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 BAG1Q99933 345 aaPredicted RBP9.04□□□□□ -0.96
SMG1-202ENST00000446231 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 ATP8B2P98198 1209 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 ERICH2A1L162 156 aa9.04□□□□□ -0.96
SMG1-202ENST00000446231 CCDC172P0C7W6 258 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 ZNF622Q969S3 477 aaKnown RBP eCLIP9.03□□□□□ -0.964e-7■□□□□ 11.3
SMG1-202ENST00000446231 NAA15Q9BXJ9 866 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 AIMP1Q12904 312 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 SYNJ1O43426 1573 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 MPHOSPH8Q99549 860 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 CDK19Q9BWU1 502 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA4Q13439 2230 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 FBXO38Q6PIJ6 1188 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 PHAXQ9H814 394 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 SPECC1LQ69YQ0 1117 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 USO1O60763 962 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 BOLA2Q9H3K6 86 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 VEZTQ9HBM0 779 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 IMPACTQ9P2X3 320 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 ANKRD36BQ8N2N9 1353 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 PTPRCP08575 1304 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 RABGGTAQ92696 567 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA8BA8MQT2 603 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 SLFNL1Q499Z3 407 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 MCM10Q7L590 875 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 CAPZA3Q96KX2 299 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 MED4Q9NPJ6 270 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 ZNF526Q8TF50 670 aaPredicted RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 ENOX2Q16206 610 aaKnown RBP9.03□□□□□ -0.96
SMG1-202ENST00000446231 CNNM3Q8NE01 707 aa9.03□□□□□ -0.96
SMG1-202ENST00000446231 GOLGA6BA6NDN3 693 aa9.02□□□□□ -0.96
SMG1-202ENST00000446231 PPP1R42Q7Z4L9 355 aa9.02□□□□□ -0.96
SMG1-202ENST00000446231 TRMT2AQ8IZ69 625 aaKnown RBP9.02□□□□□ -0.96
SMG1-202ENST00000446231 MAP1BP46821 2468 aaKnown RBP9.02□□□□□ -0.96
SMG1-202ENST00000446231 UTP14AQ9BVJ6 771 aaKnown RBP9.02□□□□□ -0.96
SMG1-202ENST00000446231 BRF1Q92994 677 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 PPFIA3O75145 1194 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 GUCY1B3Q02153 619 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 LIG3P49916 1009 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 MMS22LQ6ZRQ5 1243 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 RNF216Q9NWF9 866 aaPredicted RBP9.02□□□□□ -0.97
SMG1-202ENST00000446231 CLCN6P51797 869 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 CEP131Q9UPN4 1083 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 DAPK1P53355 1430 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 MPHOSPH10O00566 681 aaKnown RBP9.02□□□□□ -0.97
SMG1-202ENST00000446231 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
SMG1-202ENST00000446231 NDUFAB1O14561 156 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 CDC25BP30305 580 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 RBBP5Q15291 538 aaKnown RBP9.02□□□□□ -0.97
SMG1-202ENST00000446231 ORC3Q9UBD5 711 aaPredicted RBP9.02□□□□□ -0.97
SMG1-202ENST00000446231 CSB-PGBD3P0DP91 1061 aa9.02□□□□□ -0.97
SMG1-202ENST00000446231 SMARCA4P51532 1647 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 A0A087WUV0 522 aaPredicted RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 MAGEA9P43362 315 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 ZBTB7BO15156 539 aaPredicted RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 VAMP4O75379 141 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 WDHD1O75717 1129 aaPredicted RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 ATP8B1O43520 1251 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 RPRD2Q5VT52 1461 aaKnown RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 EFCAB8A8MWE9 144 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 CEP85Q6P2H3 762 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 ABCC5O15440 1437 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 FANCCQ00597 558 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 PDLIM2Q96JY6 352 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 NAPGQ99747 312 aaPredicted RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 SETSIPP0DME0 302 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 CLEC17AQ6ZS10 378 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 AK2P54819 239 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 KMT5BQ4FZB7 885 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 ATL3Q6DD88 541 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 AKR1B15C9JRZ8 316 aaPredicted RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 ETF1P62495 437 aaKnown RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 NUP133Q8WUM0 1156 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 CPA1P15085 419 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 CCDC129Q6ZRS4 1044 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 GIGYF2Q6Y7W6 1299 aaKnown RBP9.01□□□□□ -0.97
SMG1-202ENST00000446231 ANKRD7Q92527 254 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
SMG1-202ENST00000446231 FKBP15Q5T1M5 1219 aa9□□□□□ -0.97
SMG1-202ENST00000446231 TEX2Q8IWB9 1127 aa9□□□□□ -0.97
SMG1-202ENST00000446231 RABEP2Q9H5N1 569 aa9□□□□□ -0.97
SMG1-202ENST00000446231 DNA2P51530 1060 aa9□□□□□ -0.97
SMG1-202ENST00000446231 HLTFQ14527 1009 aaKnown RBP eCLIP9□□□□□ -0.972e-7■□□□□ 11.3
SMG1-202ENST00000446231 NRBP1Q9UHY1 535 aa9□□□□□ -0.97
SMG1-202ENST00000446231 SEPT7Q16181 437 aaKnown RBP9□□□□□ -0.97
SMG1-202ENST00000446231 PAIP2Q9BPZ3 127 aaKnown RBP9□□□□□ -0.97
SMG1-202ENST00000446231 CTIFO43310 598 aaKnown RBP9□□□□□ -0.97
SMG1-202ENST00000446231 CACTINQ8WUQ7 758 aaKnown RBP9□□□□□ -0.97
SMG1-202ENST00000446231 F6X3S4 739 aa9□□□□□ -0.97
SMG1-202ENST00000446231 KANK3Q6NY19 840 aa9□□□□□ -0.97
SMG1-202ENST00000446231 LRRC8AQ8IWT6 810 aa9□□□□□ -0.97
SMG1-202ENST00000446231 IGSF22Q8N9C0 903 aa8.99□□□□□ -0.97
SMG1-202ENST00000446231 MTMR6Q9Y217 621 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 475.1 ms