RNA–Protein interactions for RNA: ENST00000444658.7

CCNDBP1-202, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-202ENST00000444658 SURF6O75683 361 aaKnown RBP11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 ANP32AP39687 249 aaKnown RBP11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 C8orf34Q49A92 452 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 DZIP3Q86Y13 1208 aaKnown RBP11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 PLEKHM2Q8IWE5 1019 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 ZBTB38Q8NAP3 1195 aaPredicted RBP11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 KIF1BPQ96EK5 621 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 ZBTB3Q9H5J0 574 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 BICC1Q9H694 974 aaKnown RBP11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 COPRSQ9NQ92 184 aa11.44□□□□□ -0.58
CCNDBP1-202ENST00000444658 RPS6KA4O75676 772 aa11.43□□□□□ -0.58
CCNDBP1-202ENST00000444658 HSP90B1P14625 803 aaKnown RBP11.43□□□□□ -0.58
CCNDBP1-202ENST00000444658 SLC27A3Q5K4L6 730 aa11.43□□□□□ -0.58
CCNDBP1-202ENST00000444658 SKAP1Q86WV1 359 aa11.43□□□□□ -0.58
CCNDBP1-202ENST00000444658 STAP2Q9UGK3 403 aa11.43□□□□□ -0.58
CCNDBP1-202ENST00000444658 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
CCNDBP1-202ENST00000444658 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 CSF1RP07333 972 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 RXRBP28702 533 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 FOXO4P98177 505 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 PARP10Q53GL7 1025 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 RHPN1Q8TCX5 695 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 DOT1LQ8TEK3 1739 aa11.42□□□□□ -0.58
CCNDBP1-202ENST00000444658 AOX1Q06278 1338 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 SALL3Q9BXA9 1300 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 CAMTA2O94983 1202 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 HLFQ16534 295 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 UBE3BQ7Z3V4 1068 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 LINC00116Q8NCU8 138 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 EXOC6BQ9Y2D4 811 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
CCNDBP1-202ENST00000444658 PLSCR1O15162 318 aa11.4□□□□□ -0.58
CCNDBP1-202ENST00000444658 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.58
CCNDBP1-202ENST00000444658 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCNDBP1-202ENST00000444658 PDE1AP54750 535 aa11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 PTPN12Q05209 780 aaKnown RBP11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 EPHA10Q5JZY3 1008 aa11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 PTF1AQ7RTS3 328 aa11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 CCNL1Q9UK58 526 aaPredicted RBP11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 USP42Q9H9J4 1324 aaKnown RBP11.39□□□□□ -0.59
CCNDBP1-202ENST00000444658 LMBR1LQ6UX01 489 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 CLASRPQ8N2M8 674 aaKnown RBP11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 NARFQ9UHQ1 456 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 ZNF330Q9Y3S2 320 aaPredicted RBP11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 RREB1Q92766 1687 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 TJP1Q07157 1748 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 CIAO1O76071 339 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 TTC22Q5TAA0 569 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 GPR108Q9NPR9 543 aa11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 RTCBQ9Y3I0 505 aaKnown RBP11.38□□□□□ -0.59
CCNDBP1-202ENST00000444658 TTC41PQ6P2S7 1318 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 SMARCA5O60264 1052 aaPredicted RBP11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 PDE8AO60658 829 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 SASH1O94885 1247 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 MX1P20591 662 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 FAM182BQ5T319 152 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 TICAM2Q86XR7 235 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 ARXQ96QS3 562 aa11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
CCNDBP1-202ENST00000444658 IL15P40933 162 aaPredicted RBP11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 SLC10A5Q5PT55 438 aa11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 TTLL11Q8NHH1 800 aa11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 FAM89AQ96GI7 184 aa11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 RGS17Q9UGC6 210 aaPredicted RBP11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 ARFGEF2Q9Y6D5 1785 aa11.36□□□□□ -0.59
CCNDBP1-202ENST00000444658 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 IRS4O14654 1257 aaPredicted RBP11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 OS9Q13438 667 aaPredicted RBP11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 CCDC57Q2TAC2 916 aa11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 TRAPPC3LQ5T215 181 aa11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 UBN2Q6ZU65 1347 aa11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 SH3TC1Q8TE82 1336 aa11.35□□□□□ -0.59
CCNDBP1-202ENST00000444658 ERC2O15083 957 aa11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 ZPR1O75312 459 aa11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 GSPT1P15170 499 aaKnown RBP11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 SUSD4Q5VX71 490 aa11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 GPATCH3Q96I76 525 aa11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCNDBP1-202ENST00000444658 EYA2O00167 538 aa11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 APBB1O00213 710 aa11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 EPB41L2O43491 1005 aaKnown RBP11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 CDC45O75419 566 aa11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 GLRX3O76003 335 aaKnown RBP11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 TRIM37O94972 964 aa11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 IFIT2P09913 472 aaKnown RBP11.33□□□□□ -0.6
CCNDBP1-202ENST00000444658 GPTP24298 496 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms