RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
PIKFYVE-206ENST00000443896 ZCRB1Q8TBF4 217 aaKnown RBP19.61■□□□□ 0.73
PIKFYVE-206ENST00000443896 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
PIKFYVE-206ENST00000443896 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
PIKFYVE-206ENST00000443896 TOM1L2Q6ZVM7 507 aa19.61■□□□□ 0.73
PIKFYVE-206ENST00000443896 KLHL40Q2TBA0 621 aa19.6■□□□□ 0.73
PIKFYVE-206ENST00000443896 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
PIKFYVE-206ENST00000443896 AFDNP55196 1824 aaKnown RBP19.6■□□□□ 0.73
PIKFYVE-206ENST00000443896 MCTP1Q6DN14 999 aa19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 ABCA3Q99758 1704 aa19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 UBR2Q8IWV8 1755 aa19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 BBXQ8WY36 941 aaPredicted RBP19.59■□□□□ 0.73
PIKFYVE-206ENST00000443896 NKX1-1Q15270 411 aaPredicted RBP19.58■□□□□ 0.73
PIKFYVE-206ENST00000443896 RABL6Q3YEC7 729 aaPredicted RBP19.58■□□□□ 0.73
PIKFYVE-206ENST00000443896 SIL1Q9H173 461 aa19.58■□□□□ 0.73
PIKFYVE-206ENST00000443896 COPRSQ9NQ92 184 aa19.58■□□□□ 0.73
PIKFYVE-206ENST00000443896 KLHDC4Q8TBB5 520 aa19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 CCDC8Q9H0W5 538 aaPredicted RBP19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 RFX5P48382 616 aaPredicted RBP19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 RASEFQ8IZ41 740 aa19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 LMBRD1Q9NUN5 540 aa19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 TLR7Q9NYK1 1049 aaKnown RBP19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 PAPPAQ13219 1627 aa19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 TTC14Q96N46 770 aa19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 CARD10Q9BWT7 1032 aa19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 DDX49Q9Y6V7 483 aaKnown RBP19.57■□□□□ 0.72
PIKFYVE-206ENST00000443896 NOL8Q76FK4 1167 aaKnown RBP19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 ZNF335Q9H4Z2 1342 aaPredicted RBP19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 KCPQ6ZWJ8 1503 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 NBPF26B4DH59 902 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 HIP1O00291 1037 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 BRD1O95696 1058 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 IL2RBP14784 551 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 MSNP26038 577 aaKnown RBP19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 CASP7P55210 303 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 NBPF10Q6P3W6 841 aaKnown RBP19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 UBE3BQ7Z3V4 1068 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 NBPF15Q8N660 670 aa19.56■□□□□ 0.72
PIKFYVE-206ENST00000443896 SHANK3Q9BYB0 1731 aa19.55■□□□□ 0.72
PIKFYVE-206ENST00000443896 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
PIKFYVE-206ENST00000443896 KCNB2Q92953 911 aa19.55■□□□□ 0.72
PIKFYVE-206ENST00000443896 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
PIKFYVE-206ENST00000443896 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
PIKFYVE-206ENST00000443896 PTH1RQ03431 593 aa19.54■□□□□ 0.72
PIKFYVE-206ENST00000443896 SNRKQ9NRH2 765 aa19.54■□□□□ 0.72
PIKFYVE-206ENST00000443896 A0A087WZG4 1122 aa19.54■□□□□ 0.72
PIKFYVE-206ENST00000443896 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
PIKFYVE-206ENST00000443896 NUP188Q5SRE5 1749 aa19.53■□□□□ 0.72
PIKFYVE-206ENST00000443896 TNS2Q63HR2 1409 aa19.52■□□□□ 0.72
PIKFYVE-206ENST00000443896 CCDC171Q6TFL3 1326 aa19.52■□□□□ 0.72
PIKFYVE-206ENST00000443896 BOLA2Q9H3K6 86 aa19.52■□□□□ 0.72
PIKFYVE-206ENST00000443896 UQCRHLA0A096LP55 91 aa19.52■□□□□ 0.71
PIKFYVE-206ENST00000443896 UQCRHP07919 91 aa19.52■□□□□ 0.71
PIKFYVE-206ENST00000443896 AK2P54819 239 aa19.51■□□□□ 0.71
PIKFYVE-206ENST00000443896 NMIQ13287 307 aaPredicted RBP19.51■□□□□ 0.71
PIKFYVE-206ENST00000443896 NECTIN1Q15223 517 aa19.51■□□□□ 0.71
PIKFYVE-206ENST00000443896 FAM227BQ96M60 508 aa19.51■□□□□ 0.71
PIKFYVE-206ENST00000443896 H7C1W4 665 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 MAPK8IP2Q13387 824 aaPredicted RBP19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 TM6SF1Q9BZW5 370 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 NHSL1Q5SYE7 1610 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 TNNI3KQ59H18 835 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 FPGT-TNNI3KV9GXZ4 949 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 PRPF40AO75400 957 aaKnown RBP19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 PRPF40BQ6NWY9 871 aaKnown RBP19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 TTLL7Q6ZT98 887 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 RUFY3Q7L099 469 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 LIMCH1Q9UPQ0 1083 aa19.5■□□□□ 0.71
PIKFYVE-206ENST00000443896 CASTP20810 708 aaKnown RBP19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 TFCP2Q12800 502 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 DDX54Q8TDD1 881 aaKnown RBP19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 MAP4K1Q92918 833 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 DBNLQ9UJU6 430 aaKnown RBP19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 ATP5JP18859 108 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 FSD1Q9BTV5 496 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 STRN4Q9NRL3 753 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 FOXO4P98177 505 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 TSC1Q92574 1164 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 ZSWIM6Q9HCJ5 1215 aa19.49■□□□□ 0.71
PIKFYVE-206ENST00000443896 A1BGP04217 495 aa19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 TJP1Q07157 1748 aa19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 MED23Q9ULK4 1368 aa19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 ADCK5Q3MIX3 580 aa19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 VPS53Q5VIR6 699 aa19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 CWC25Q9NXE8 425 aaPredicted RBP19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 RBM8AQ9Y5S9 174 aaKnown RBP19.48■□□□□ 0.71
PIKFYVE-206ENST00000443896 A0A0D9SFI3 127 aa19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 NCLP19338 710 aaKnown RBP19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 EVA1CP58658 441 aa19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 FOXD4L5Q5VV16 416 aaPredicted RBP19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 LMBR1LQ6UX01 489 aa19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 FOXD4L4Q8WXT5 416 aaPredicted RBP19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 TOGARAM1Q9Y4F4 1720 aa19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 ZNF445P59923 1031 aa19.47■□□□□ 0.71
PIKFYVE-206ENST00000443896 GPT2Q8TD30 523 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms