RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 NGLY1Q96IV0 654 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 SEC16BQ96JE7 1060 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 COPRSQ9NQ92 184 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 CHMP3Q9Y3E7 222 aa7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 V9GY48 417 aaPredicted RBP7.52□□□□□ -1.21
TM9SF3-202ENST00000443638 PCSK2P16519 638 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 ADD1P35611 737 aaKnown RBP7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 LAPTM4AQ15012 233 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 Q6ZNB5 142 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 CKAP2LQ8IYA6 745 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 NBPF15Q8N660 670 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 GPR152Q8TDT2 470 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 ZNF516Q92618 1163 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 KLHL42Q9P2K6 505 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 FAM8A1Q9UBU6 413 aa7.51□□□□□ -1.21
TM9SF3-202ENST00000443638 FSHRP23945 695 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 NOS2P35228 1153 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 IRS1P35568 1242 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 TLR1Q15399 786 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 USPL1Q5W0Q7 1092 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 TREML1Q86YW5 311 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 DHX37Q8IY37 1157 aaKnown RBP7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 EPS8L3Q8TE67 593 aaKnown RBP7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 CCDC74AQ96AQ1 378 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 RNPC3Q96LT9 517 aaKnown RBP7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 FHDC1Q9C0D6 1143 aaPredicted RBP7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 RAB6BQ9NRW1 208 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 BCS1LQ9Y276 419 aa7.5□□□□□ -1.21
TM9SF3-202ENST00000443638 A6NHS1 94 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 RPLP1P05386 114 aaKnown RBP7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 TRIM32Q13049 653 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 MPNDQ8N594 471 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 ZCRB1Q8TBF4 217 aaKnown RBP7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 ESYT1Q9BSJ8 1104 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 PHACTR1Q9C0D0 580 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 IL21Q9HBE4 155 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 HCN4Q9Y3Q4 1203 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 PPME1Q9Y570 386 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 COL4A3BPQ9Y5P4 624 aa7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 TTBK1Q5TCY1 1321 aaPredicted RBP7.49□□□□□ -1.21
TM9SF3-202ENST00000443638 USP17L7P0C7H9 530 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 PLEKHG4Q58EX7 1191 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 PPP1R26Q5T8A7 1209 aaPredicted RBP7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 RNF187Q5TA31 235 aaPredicted RBP7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 C1orf53Q5VUE5 145 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 L3MBTL2Q969R5 705 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 ZNF408Q9H9D4 720 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 SUGT1Q9Y2Z0 365 aa7.48□□□□□ -1.21
TM9SF3-202ENST00000443638 KLF4O43474 513 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 TNFRSF21O75509 655 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 CLSTN1O94985 981 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 IBSPP21815 317 aaPredicted RBP7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 ANAPC15P60006 121 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 C8orf34Q49A92 452 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 XKR5Q6UX68 686 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 KDF1Q8NAX2 398 aaPredicted RBP7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 CNKSR1Q969H4 720 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 NOC4LQ9BVI4 516 aaKnown RBP7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 NEUROD4Q9HD90 331 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 PCDH12Q9NPG4 1184 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 KBTBD4Q9NVX7 518 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 IFT57Q9NWB7 429 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 SIRPGQ9P1W8 387 aa7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 ARID4BQ4LE39 1312 aaPredicted RBP7.47□□□□□ -1.21
TM9SF3-202ENST00000443638 CCDC181Q5TID7 509 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 CCDC116Q8IYX3 515 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 RPUSD2Q8IZ73 545 aaKnown RBP7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 C7orf43Q8WVR3 580 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 RSRP1Q9BUV0 290 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 FAM13BQ9NYF5 915 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 ADAMTS1Q9UHI8 967 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 FOXD3Q9UJU5 478 aaPredicted RBP7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.22
TM9SF3-202ENST00000443638 PARNO95453 639 aaKnown RBP7.45□□□□□ -1.22
TM9SF3-202ENST00000443638 NFX1Q12986 1120 aaKnown RBP7.45□□□□□ -1.22
TM9SF3-202ENST00000443638 CLN3Q13286 438 aa7.45□□□□□ -1.22
TM9SF3-202ENST00000443638 RASA3Q14644 834 aa7.45□□□□□ -1.22
TM9SF3-202ENST00000443638 SPON2Q9BUD6 331 aa7.45□□□□□ -1.22
TM9SF3-202ENST00000443638 ZFYVE28Q9HCC9 887 aa7.45□□□□□ -1.22
TM9SF3-202ENST00000443638 MICAL2O94851 1124 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 ETFBP38117 255 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 SOX9P48436 509 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 NASPP49321 788 aaPredicted RBP7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 MAP3K10Q02779 954 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 RAB33AQ14088 237 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 ARID5BQ14865 1188 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 PPARGC1BQ86YN6 1023 aaKnown RBP7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 KIAA0825Q8IV33 1275 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 SNX29Q8TEQ0 813 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 KCNQ5Q9NR82 932 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 SLC52A1Q9NWF4 448 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
TM9SF3-202ENST00000443638 DNAJC6O75061 913 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 ADH1CP00326 375 aa7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 SSBP05455 408 aaKnown RBP eCLIP7.43□□□□□ -1.22
TM9SF3-202ENST00000443638 NR3C2P08235 984 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms