RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 FKBP5Q13451 457 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-211ENST00000443563 ALDH1L2Q3SY69 923 aa13.83□□□□□ -0.2
HDAC6-211ENST00000443563 PI4KAP1Q8N8J0 262 aa13.83□□□□□ -0.2
HDAC6-211ENST00000443563 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-211ENST00000443563 TRMT112Q9UI30 125 aaKnown RBP13.83□□□□□ -0.2
HDAC6-211ENST00000443563 MAP3K2Q9Y2U5 619 aa13.83□□□□□ -0.2
HDAC6-211ENST00000443563 HSP90B1P14625 803 aaKnown RBP13.82□□□□□ -0.2
HDAC6-211ENST00000443563 CHRNA5P30532 468 aa13.82□□□□□ -0.2
HDAC6-211ENST00000443563 ERFEQ4G0M1 354 aa13.82□□□□□ -0.2
HDAC6-211ENST00000443563 DALRD3Q5D0E6 543 aaKnown RBP13.82□□□□□ -0.2
HDAC6-211ENST00000443563 G2E3Q7L622 706 aa13.82□□□□□ -0.2
HDAC6-211ENST00000443563 CCDC24Q8N4L8 307 aa13.82□□□□□ -0.2
HDAC6-211ENST00000443563 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
HDAC6-211ENST00000443563 MYD88Q99836 296 aa13.82□□□□□ -0.2
HDAC6-211ENST00000443563 COL11A2P13942 1736 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-211ENST00000443563 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-211ENST00000443563 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
HDAC6-211ENST00000443563 NUTM1Q86Y26 1132 aa13.81□□□□□ -0.2
HDAC6-211ENST00000443563 MASTLQ96GX5 879 aa13.81□□□□□ -0.2
HDAC6-211ENST00000443563 BCS1LQ9Y276 419 aa13.81□□□□□ -0.2
HDAC6-211ENST00000443563 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
HDAC6-211ENST00000443563 ADCY9O60503 1353 aa13.81□□□□□ -0.2
HDAC6-211ENST00000443563 CHD4Q14839 1912 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 SRGNP10124 158 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 NPR1P16066 1061 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 SLC10A5Q5PT55 438 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 STYK1Q6J9G0 422 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
HDAC6-211ENST00000443563 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 DNAAF4Q8WXU2 420 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 CNKSR1Q969H4 720 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 ZNF622Q969S3 477 aaKnown RBP eCLIP13.8□□□□□ -0.22e-7■□□□□ 9.6
HDAC6-211ENST00000443563 NLRP3Q96P20 1036 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
HDAC6-211ENST00000443563 PTPRCP08575 1304 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 LAMB2P55268 1798 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 CACNA1SQ13698 1873 aa13.8□□□□□ -0.2
HDAC6-211ENST00000443563 TNRC6CQ9HCJ0 1690 aaKnown RBP13.79□□□□□ -0.2
HDAC6-211ENST00000443563 YBX3P16989 372 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDAC6-211ENST00000443563 ALDH1B1P30837 517 aa13.79□□□□□ -0.2
HDAC6-211ENST00000443563 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
HDAC6-211ENST00000443563 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
HDAC6-211ENST00000443563 SMC4Q9NTJ3 1288 aa13.79□□□□□ -0.2
HDAC6-211ENST00000443563 ABCC12Q96J65 1359 aa13.79□□□□□ -0.2
HDAC6-211ENST00000443563 CRY2Q49AN0 593 aa13.78□□□□□ -0.2
HDAC6-211ENST00000443563 ZBTB38Q8NAP3 1195 aaPredicted RBP13.78□□□□□ -0.2
HDAC6-211ENST00000443563 LINS1Q8NG48 757 aa13.78□□□□□ -0.2
HDAC6-211ENST00000443563 DDX60Q8IY21 1712 aaKnown RBP13.78□□□□□ -0.2
HDAC6-211ENST00000443563 PCCAP05165 728 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-211ENST00000443563 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
HDAC6-211ENST00000443563 WWC3Q9ULE0 1092 aa13.77□□□□□ -0.21
HDAC6-211ENST00000443563 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
HDAC6-211ENST00000443563 IGKV5-2P06315 115 aa13.76□□□□□ -0.21
HDAC6-211ENST00000443563 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-211ENST00000443563 SOGA3Q5TF21 947 aa13.76□□□□□ -0.21
HDAC6-211ENST00000443563 FAM89AQ96GI7 184 aa13.76□□□□□ -0.21
HDAC6-211ENST00000443563 KIF16BQ96L93 1317 aa13.75□□□□□ -0.21
HDAC6-211ENST00000443563 MYH3P11055 1940 aa13.75□□□□□ -0.21
HDAC6-211ENST00000443563 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-211ENST00000443563 HCLS1P14317 486 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-211ENST00000443563 HOXA10P31260 410 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-211ENST00000443563 RARSP54136 660 aaKnown RBP13.75□□□□□ -0.21
HDAC6-211ENST00000443563 CWF19L2Q2TBE0 894 aaKnown RBP13.75□□□□□ -0.21
HDAC6-211ENST00000443563 BCL2L13Q9BXK5 485 aa13.75□□□□□ -0.21
HDAC6-211ENST00000443563 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 GCKRQ14397 625 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 BEND3Q5T5X7 828 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 PRPF40BQ6NWY9 871 aaKnown RBP13.74□□□□□ -0.21
HDAC6-211ENST00000443563 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 ARHGAP27Q6ZUM4 889 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 CRAMP1Q96RY5 1269 aa13.74□□□□□ -0.21
HDAC6-211ENST00000443563 F6X3S4 739 aa13.73□□□□□ -0.21
HDAC6-211ENST00000443563 PDE8AO60658 829 aa13.73□□□□□ -0.21
HDAC6-211ENST00000443563 ALDH1L1O75891 902 aa13.73□□□□□ -0.21
HDAC6-211ENST00000443563 RTL5Q5HYW3 569 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-211ENST00000443563 DDX46Q7L014 1031 aaKnown RBP13.73□□□□□ -0.21
HDAC6-211ENST00000443563 SYNE4Q8N205 404 aa13.73□□□□□ -0.21
HDAC6-211ENST00000443563 API5Q9BZZ5 524 aaKnown RBP13.73□□□□□ -0.21
HDAC6-211ENST00000443563 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
HDAC6-211ENST00000443563 TMX4Q9H1E5 349 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-211ENST00000443563 H7C1W4 665 aa13.72□□□□□ -0.21
HDAC6-211ENST00000443563 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
HDAC6-211ENST00000443563 SF3B3Q15393 1217 aaKnown RBP13.72□□□□□ -0.21
HDAC6-211ENST00000443563 GRIPAP1Q4V328 841 aa13.72□□□□□ -0.21
HDAC6-211ENST00000443563 ARHGAP45Q92619 1136 aa13.72□□□□□ -0.21
HDAC6-211ENST00000443563 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
HDAC6-211ENST00000443563 C21orf2O43822 256 aa13.71□□□□□ -0.21
HDAC6-211ENST00000443563 CCDC152Q4G0S7 254 aa13.71□□□□□ -0.21
HDAC6-211ENST00000443563 CCDC93Q567U6 631 aa13.71□□□□□ -0.21
HDAC6-211ENST00000443563 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
HDAC6-211ENST00000443563 C3orf67Q6ZVT6 689 aa13.71□□□□□ -0.21
HDAC6-211ENST00000443563 NOB1Q9ULX3 412 aaKnown RBP13.71□□□□□ -0.21
HDAC6-211ENST00000443563 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-211ENST00000443563 BBOX1O75936 387 aa13.7□□□□□ -0.22
HDAC6-211ENST00000443563 UBE3BQ7Z3V4 1068 aa13.7□□□□□ -0.22
HDAC6-211ENST00000443563 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
HDAC6-211ENST00000443563 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-211ENST00000443563 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-211ENST00000443563 SBF1O95248 1867 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms