RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 HSP90AB3PQ58FF7 597 aa18.11■□□□□ 0.49
PTPRE-203ENST00000442830 TTLL7Q6ZT98 887 aa18.11■□□□□ 0.49
PTPRE-203ENST00000442830 ZNF34Q8IZ26 560 aa18.11■□□□□ 0.49
PTPRE-203ENST00000442830 VPS33BQ9H267 617 aa18.11■□□□□ 0.49
PTPRE-203ENST00000442830 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
PTPRE-203ENST00000442830 SNED1Q8TER0 1413 aa18.11■□□□□ 0.49
PTPRE-203ENST00000442830 ADAMTSL1Q8N6G6 1762 aa18.1■□□□□ 0.49
PTPRE-203ENST00000442830 PASKQ96RG2 1323 aa18.1■□□□□ 0.49
PTPRE-203ENST00000442830 HSPA1AP0DMV8 641 aaKnown RBP18.1■□□□□ 0.49
PTPRE-203ENST00000442830 HSPA1BP0DMV9 641 aaKnown RBP18.1■□□□□ 0.49
PTPRE-203ENST00000442830 RIPK4P57078 832 aa18.1■□□□□ 0.49
PTPRE-203ENST00000442830 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
PTPRE-203ENST00000442830 UBN2Q6ZU65 1347 aa18.09■□□□□ 0.49
PTPRE-203ENST00000442830 ZNF541Q9H0D2 1346 aa18.09■□□□□ 0.49
PTPRE-203ENST00000442830 NTSR2O95665 410 aa18.09■□□□□ 0.49
PTPRE-203ENST00000442830 GPTP24298 496 aa18.09■□□□□ 0.49
PTPRE-203ENST00000442830 EPHX2P34913 555 aa18.09■□□□□ 0.49
PTPRE-203ENST00000442830 NLRP3Q96P20 1036 aa18.09■□□□□ 0.49
PTPRE-203ENST00000442830 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
PTPRE-203ENST00000442830 CNTNAP1P78357 1384 aa18.08■□□□□ 0.49
PTPRE-203ENST00000442830 LMOD1P29536 600 aaPredicted RBP18.08■□□□□ 0.48
PTPRE-203ENST00000442830 SUSD4Q5VX71 490 aa18.08■□□□□ 0.48
PTPRE-203ENST00000442830 POTEDQ86YR6 584 aa18.08■□□□□ 0.48
PTPRE-203ENST00000442830 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
PTPRE-203ENST00000442830 TMEM88BA6NKF7 163 aa18.07■□□□□ 0.48
PTPRE-203ENST00000442830 PPEF1O14829 653 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-203ENST00000442830 TMPOP42166 694 aaKnown RBP18.07■□□□□ 0.48
PTPRE-203ENST00000442830 EAPPQ56P03 285 aaPredicted RBP18.07■□□□□ 0.48
PTPRE-203ENST00000442830 TNS4Q8IZW8 715 aa18.07■□□□□ 0.48
PTPRE-203ENST00000442830 SUPT20HQ8NEM7 779 aa18.07■□□□□ 0.48
PTPRE-203ENST00000442830 UTP14AQ9BVJ6 771 aaKnown RBP18.07■□□□□ 0.48
PTPRE-203ENST00000442830 POTEIP0CG38 1075 aa18.06■□□□□ 0.48
PTPRE-203ENST00000442830 POTEJP0CG39 1038 aa18.06■□□□□ 0.48
PTPRE-203ENST00000442830 SLC10A5Q5PT55 438 aa18.06■□□□□ 0.48
PTPRE-203ENST00000442830 COL13A1Q5TAT6 717 aaPredicted RBP18.06■□□□□ 0.48
PTPRE-203ENST00000442830 LARGE2Q8N3Y3 721 aa18.06■□□□□ 0.48
PTPRE-203ENST00000442830 CLEC11AQ9Y240 323 aa18.06■□□□□ 0.48
PTPRE-203ENST00000442830 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
PTPRE-203ENST00000442830 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
PTPRE-203ENST00000442830 HOXB7P09629 217 aa18.04■□□□□ 0.48
PTPRE-203ENST00000442830 PDIA6Q15084 440 aa18.04■□□□□ 0.48
PTPRE-203ENST00000442830 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
PTPRE-203ENST00000442830 NIM1KQ8IY84 436 aa18.04■□□□□ 0.48
PTPRE-203ENST00000442830 MKRN1Q9UHC7 482 aaKnown RBP18.04■□□□□ 0.48
PTPRE-203ENST00000442830 BBOX1O75936 387 aa18.03■□□□□ 0.48
PTPRE-203ENST00000442830 ITGBL1O95965 494 aaPredicted RBP18.03■□□□□ 0.48
PTPRE-203ENST00000442830 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPRE-203ENST00000442830 TMC4Q7Z404 712 aa18.03■□□□□ 0.48
PTPRE-203ENST00000442830 DDX21Q9NR30 783 aaKnown RBP eCLIP18.03■□□□□ 0.48
PTPRE-203ENST00000442830 ATP6V0A2Q9Y487 856 aa18.03■□□□□ 0.48
PTPRE-203ENST00000442830 LAMB2P55268 1798 aa18.03■□□□□ 0.48
PTPRE-203ENST00000442830 CNTROBQ8N137 903 aa18.02■□□□□ 0.48
PTPRE-203ENST00000442830 AIDAQ96BJ3 306 aa18.02■□□□□ 0.48
PTPRE-203ENST00000442830 RUNDC1Q96C34 613 aa18.02■□□□□ 0.48
PTPRE-203ENST00000442830 TRPM7Q96QT4 1865 aa18.02■□□□□ 0.48
PTPRE-203ENST00000442830 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
PTPRE-203ENST00000442830 USP50Q70EL3 339 aaPredicted RBP18.01■□□□□ 0.47
PTPRE-203ENST00000442830 GJA3Q9Y6H8 435 aa18.01■□□□□ 0.47
PTPRE-203ENST00000442830 SH3TC1Q8TE82 1336 aa18■□□□□ 0.47
PTPRE-203ENST00000442830 CDHR2Q9BYE9 1310 aa18■□□□□ 0.47
PTPRE-203ENST00000442830 CHL1O00533 1208 aa18■□□□□ 0.47
PTPRE-203ENST00000442830 TCIRG1Q13488 830 aa18■□□□□ 0.47
PTPRE-203ENST00000442830 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
PTPRE-203ENST00000442830 COPS6Q7L5N1 327 aa18■□□□□ 0.47
PTPRE-203ENST00000442830 RTFDC1Q9BY42 306 aaPredicted RBP18■□□□□ 0.47
PTPRE-203ENST00000442830 RASSF10A6NK89 507 aa17.99■□□□□ 0.47
PTPRE-203ENST00000442830 NLRP10Q86W26 655 aa17.99■□□□□ 0.47
PTPRE-203ENST00000442830 SP8Q8IXZ3 490 aa17.99■□□□□ 0.47
PTPRE-203ENST00000442830 XAGE3Q8WTP9 111 aa17.99■□□□□ 0.47
PTPRE-203ENST00000442830 ABCC4O15439 1325 aa17.98■□□□□ 0.47
PTPRE-203ENST00000442830 DPP8Q6V1X1 898 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-203ENST00000442830 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
PTPRE-203ENST00000442830 PRDM10Q9NQV6 1147 aa17.98■□□□□ 0.47
PTPRE-203ENST00000442830 TRMT112Q9UI30 125 aaKnown RBP17.98■□□□□ 0.47
PTPRE-203ENST00000442830 COL4A5P29400 1685 aa17.98■□□□□ 0.47
PTPRE-203ENST00000442830 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
PTPRE-203ENST00000442830 CTCFP49711 727 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-203ENST00000442830 SCNN1DP51172 638 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 AIMP1Q12904 312 aaKnown RBP17.97■□□□□ 0.47
PTPRE-203ENST00000442830 GRAPQ13588 217 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 DEFB115Q30KQ5 88 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 MPNDQ8N594 471 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 PLBD2Q8NHP8 589 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 GRAPLQ8TC17 118 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-203ENST00000442830 DBF4Q9UBU7 674 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-203ENST00000442830 ZNRF3Q9ULT6 936 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 LTBP1Q14766 1721 aa17.97■□□□□ 0.47
PTPRE-203ENST00000442830 LRRC37AA6NMS7 1700 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 VEGFBP49765 207 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 MAP2K1Q02750 393 aaPredicted RBP17.96■□□□□ 0.47
PTPRE-203ENST00000442830 CALD1Q05682 793 aaKnown RBP17.96■□□□□ 0.47
PTPRE-203ENST00000442830 TNIP1Q15025 636 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 AOC3Q16853 763 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 HDGFL1Q5TGJ6 251 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 MAP1SQ66K74 1059 aaPredicted RBP17.96■□□□□ 0.47
PTPRE-203ENST00000442830 ADARB2Q9NS39 739 aaKnown RBP17.96■□□□□ 0.47
PTPRE-203ENST00000442830 HYPKQ9NX55 129 aa17.96■□□□□ 0.47
PTPRE-203ENST00000442830 TCERG1O14776 1098 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms