RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 USP42Q9H9J4 1324 aaKnown RBP23.1■■□□□ 1.29
POLR1E-203ENST00000442009 SASH1O94885 1247 aa23.1■■□□□ 1.29
POLR1E-203ENST00000442009 CRKLP46109 303 aaKnown RBP23.1■■□□□ 1.29
POLR1E-203ENST00000442009 PTPN12Q05209 780 aaKnown RBP23.09■■□□□ 1.29
POLR1E-203ENST00000442009 DDRGK1Q96HY6 314 aa23.09■■□□□ 1.29
POLR1E-203ENST00000442009 A0A0G2JS52 829 aa23.08■■□□□ 1.29
POLR1E-203ENST00000442009 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
POLR1E-203ENST00000442009 BTAF1O14981 1849 aa23.08■■□□□ 1.29
POLR1E-203ENST00000442009 SBF2Q86WG5 1849 aa23.08■■□□□ 1.28
POLR1E-203ENST00000442009 MFAP1P55081 439 aaKnown RBP23.08■■□□□ 1.28
POLR1E-203ENST00000442009 HSP90AB3PQ58FF7 597 aa23.08■■□□□ 1.28
POLR1E-203ENST00000442009 TSHZ3Q63HK5 1081 aa23.08■■□□□ 1.28
POLR1E-203ENST00000442009 NUTM1Q86Y26 1132 aa23.08■■□□□ 1.28
POLR1E-203ENST00000442009 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
POLR1E-203ENST00000442009 G3BP1Q13283 466 aaKnown RBP eCLIP23.07■■□□□ 1.28
POLR1E-203ENST00000442009 OS9Q13438 667 aaPredicted RBP23.07■■□□□ 1.28
POLR1E-203ENST00000442009 LMBR1LQ6UX01 489 aa23.07■■□□□ 1.28
POLR1E-203ENST00000442009 MYT1Q01538 1121 aa23.06■■□□□ 1.28
POLR1E-203ENST00000442009 DZIP3Q86Y13 1208 aaKnown RBP23.06■■□□□ 1.28
POLR1E-203ENST00000442009 KLHDC4Q8TBB5 520 aa23.06■■□□□ 1.28
POLR1E-203ENST00000442009 PI4K2BQ8TCG2 481 aa23.06■■□□□ 1.28
POLR1E-203ENST00000442009 C22orf23Q9BZE7 217 aa23.06■■□□□ 1.28
POLR1E-203ENST00000442009 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.06■■□□□ 1.28
POLR1E-203ENST00000442009 NLRP10Q86W26 655 aa23.05■■□□□ 1.28
POLR1E-203ENST00000442009 CLASRPQ8N2M8 674 aaKnown RBP23.05■■□□□ 1.28
POLR1E-203ENST00000442009 PLA2G12BQ9BX93 195 aa23.05■■□□□ 1.28
POLR1E-203ENST00000442009 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
POLR1E-203ENST00000442009 TBC1D2BQ9UPU7 963 aa23.05■■□□□ 1.28
POLR1E-203ENST00000442009 RBM25P49756 843 aaKnown RBP23.04■■□□□ 1.28
POLR1E-203ENST00000442009 ZNF34Q8IZ26 560 aa23.03■■□□□ 1.28
POLR1E-203ENST00000442009 TTC41PQ6P2S7 1318 aa23.03■■□□□ 1.28
POLR1E-203ENST00000442009 RTL5Q5HYW3 569 aaPredicted RBP23.03■■□□□ 1.28
POLR1E-203ENST00000442009 SEPT12Q8IYM1 358 aa23.03■■□□□ 1.28
POLR1E-203ENST00000442009 QTRT2Q9H974 415 aaKnown RBP23.03■■□□□ 1.28
POLR1E-203ENST00000442009 CDHR2Q9BYE9 1310 aa23.03■■□□□ 1.28
POLR1E-203ENST00000442009 EIF5BO60841 1220 aaKnown RBP23.02■■□□□ 1.28
POLR1E-203ENST00000442009 EAF2Q96CJ1 260 aaPredicted RBP23.02■■□□□ 1.28
POLR1E-203ENST00000442009 ARXQ96QS3 562 aa23.02■■□□□ 1.28
POLR1E-203ENST00000442009 SIL1Q9H173 461 aa23.02■■□□□ 1.28
POLR1E-203ENST00000442009 FAM182BQ5T319 152 aa23.01■■□□□ 1.27
POLR1E-203ENST00000442009 LINC00116Q8NCU8 138 aa23.01■■□□□ 1.27
POLR1E-203ENST00000442009 CSF1RP07333 972 aa23.01■■□□□ 1.27
POLR1E-203ENST00000442009 FAM89AQ96GI7 184 aa23.01■■□□□ 1.27
POLR1E-203ENST00000442009 LY75O60449 1722 aa23■■□□□ 1.27
POLR1E-203ENST00000442009 CAMTA2O94983 1202 aa23■■□□□ 1.27
POLR1E-203ENST00000442009 GPTP24298 496 aa23■■□□□ 1.27
POLR1E-203ENST00000442009 UBN2Q6ZU65 1347 aa22.99■■□□□ 1.27
POLR1E-203ENST00000442009 CNTNAP4Q9C0A0 1308 aa22.99■■□□□ 1.27
POLR1E-203ENST00000442009 AACSQ86V21 672 aa22.98■■□□□ 1.27
POLR1E-203ENST00000442009 ECHDC1Q9NTX5 307 aa22.98■■□□□ 1.27
POLR1E-203ENST00000442009 AK9Q5TCS8 1911 aa22.98■■□□□ 1.27
POLR1E-203ENST00000442009 ATG9AQ7Z3C6 839 aa22.98■■□□□ 1.27
POLR1E-203ENST00000442009 GLRX3O76003 335 aaKnown RBP22.97■■□□□ 1.27
POLR1E-203ENST00000442009 IFIT2P09913 472 aaKnown RBP22.97■■□□□ 1.27
POLR1E-203ENST00000442009 RC3H1Q5TC82 1133 aaKnown RBP22.97■■□□□ 1.27
POLR1E-203ENST00000442009 SYNE4Q8N205 404 aa22.97■■□□□ 1.27
POLR1E-203ENST00000442009 MYH3P11055 1940 aa22.97■■□□□ 1.27
POLR1E-203ENST00000442009 BCORQ6W2J9 1755 aa22.97■■□□□ 1.27
POLR1E-203ENST00000442009 CASC1Q6TDU7 716 aa22.96■■□□□ 1.27
POLR1E-203ENST00000442009 CHMLP26374 656 aa22.96■■□□□ 1.27
POLR1E-203ENST00000442009 ERC2O15083 957 aa22.95■■□□□ 1.26
POLR1E-203ENST00000442009 CIAO1O76071 339 aa22.95■■□□□ 1.26
POLR1E-203ENST00000442009 TFCP2Q12800 502 aa22.95■■□□□ 1.26
POLR1E-203ENST00000442009 KIF2CQ99661 725 aa22.95■■□□□ 1.26
POLR1E-203ENST00000442009 USP26Q9BXU7 913 aa22.95■■□□□ 1.26
POLR1E-203ENST00000442009 TAF1LQ8IZX4 1826 aa22.95■■□□□ 1.26
POLR1E-203ENST00000442009 BRWD3Q6RI45 1802 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 TRIM6-TRIM34B2RNG4 842 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 RGL2O15211 777 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 KCNQ4P56696 695 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 CHMP3Q9Y3E7 222 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 EYA2O00167 538 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 TNNI3KQ59H18 835 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 RILPL2Q969X0 211 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 GPATCH3Q96I76 525 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 CCDC8Q9H0W5 538 aaPredicted RBP22.94■■□□□ 1.26
POLR1E-203ENST00000442009 TLR7Q9NYK1 1049 aaKnown RBP22.94■■□□□ 1.26
POLR1E-203ENST00000442009 TRMT112Q9UI30 125 aaKnown RBP22.94■■□□□ 1.26
POLR1E-203ENST00000442009 FBXO3Q9UK99 471 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 FPGT-TNNI3KV9GXZ4 949 aa22.94■■□□□ 1.26
POLR1E-203ENST00000442009 IL15P40933 162 aaPredicted RBP22.93■■□□□ 1.26
POLR1E-203ENST00000442009 TTLL11Q8NHH1 800 aa22.93■■□□□ 1.26
POLR1E-203ENST00000442009 GPR108Q9NPR9 543 aa22.93■■□□□ 1.26
POLR1E-203ENST00000442009 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
POLR1E-203ENST00000442009 CLEC4GQ6UXB4 293 aa22.92■■□□□ 1.26
POLR1E-203ENST00000442009 ESYT1Q9BSJ8 1104 aa22.92■■□□□ 1.26
POLR1E-203ENST00000442009 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
POLR1E-203ENST00000442009 IRS4O14654 1257 aaPredicted RBP22.92■■□□□ 1.26
POLR1E-203ENST00000442009 PARP10Q53GL7 1025 aa22.92■■□□□ 1.26
POLR1E-203ENST00000442009 ZNF594Q96JF6 807 aaPredicted RBP22.92■■□□□ 1.26
POLR1E-203ENST00000442009 AK7Q96M32 723 aa22.92■■□□□ 1.26
POLR1E-203ENST00000442009 RPS6KA4O75676 772 aa22.91■■□□□ 1.26
POLR1E-203ENST00000442009 CCDC57Q2TAC2 916 aa22.91■■□□□ 1.26
POLR1E-203ENST00000442009 DBNLQ9UJU6 430 aaKnown RBP22.91■■□□□ 1.26
POLR1E-203ENST00000442009 CTSWP56202 376 aa22.9■■□□□ 1.26
POLR1E-203ENST00000442009 LRRC24Q50LG9 513 aa22.9■■□□□ 1.26
POLR1E-203ENST00000442009 CCNL1Q9UK58 526 aaPredicted RBP22.9■■□□□ 1.26
POLR1E-203ENST00000442009 PDE8AO60658 829 aa22.89■■□□□ 1.26
POLR1E-203ENST00000442009 REC8O95072 547 aa22.89■■□□□ 1.26
POLR1E-203ENST00000442009 SLC4A3P48751 1232 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms