RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 FRMD6Q96NE9 622 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 OSBPL7Q9BZF2 842 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 DNAJC25Q9H1X3 360 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 PGPEP1Q9NXJ5 209 aa5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 TMA7Q9Y2S6 64 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-207ENST00000441725 ADH1AP07327 375 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 PCSK2P16519 638 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 IRS1P35568 1242 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 PTPN12Q05209 780 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 USPL1Q5W0Q7 1092 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 MCF2L2Q86YR7 1114 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 PKD2L1Q9P0L9 805 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 GGT7Q9UJ14 662 aa5.98□□□□□ -1.45
CDC42BPA-207ENST00000441725 TLDC2A0PJX2 215 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 TNFRSF10AO00220 468 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 CPNE3O75131 537 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 CBLBQ13191 982 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 Q6ZNB5 142 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 USP31Q70CQ4 1352 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 TXLNAP40222 546 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 PPARGC1BQ86YN6 1023 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 ANKRD13AQ8IZ07 590 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 EPS8L3Q8TE67 593 aaKnown RBP5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 C12orf49Q9H741 205 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 ZSWIM4Q9H7M6 989 aa5.97□□□□□ -1.45
CDC42BPA-207ENST00000441725 FGRP09769 529 aa5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 FOXC1Q12948 553 aa5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 TTC16Q8NEE8 873 aa5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 KLRG1Q96E93 195 aa5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 FOXD3Q9UJU5 478 aaPredicted RBP5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 CCDC74AQ96AQ1 378 aa5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 NIFKQ9BYG3 293 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-207ENST00000441725 MEN1O00255 615 aa5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 TNFRSF21O75509 655 aa5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 MICAL2O94851 1124 aa5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 NEFLP07196 543 aa5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 GJA8P48165 433 aa5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 ZSCAN10Q96SZ4 725 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 TBX22Q9Y458 520 aa5.95□□□□□ -1.46
CDC42BPA-207ENST00000441725 WNT7AO00755 349 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 TAF1CQ15572 869 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 C1orf53Q5VUE5 145 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 NLGN1Q8N2Q7 840 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 MRGPRX2Q96LB1 330 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 AGBL1Q96MI9 1066 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 USP20Q9Y2K6 914 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 SBNO2Q9Y2G9 1366 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 ATF4P18848 351 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 PAK2Q13177 524 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 SDE2Q6IQ49 451 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 VPS37DQ86XT2 251 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 C7orf43Q8WVR3 580 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.94□□□□□ -1.461e-7■■□□□ 12.9
CDC42BPA-207ENST00000441725 OSBPL2Q9H1P3 480 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 COPRSQ9NQ92 184 aa5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
CDC42BPA-207ENST00000441725 STK10O94804 968 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 RPLP1P05386 114 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 USP17L7P0C7H9 530 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 PTGIRP43119 386 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 EGFLAMQ63HQ2 1017 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 TMEM214Q6NUQ4 689 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 RHBDD1Q8TEB9 315 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 NLRP3Q96P20 1036 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 FAM13BQ9NYF5 915 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 FAM8A1Q9UBU6 413 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 TGFBR3LH3BV60 316 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 BMS1Q14692 1282 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 Q6ZVU0 165 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 ZNF280CQ8ND82 737 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 ZNF395Q9H8N7 513 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 NPHS2Q9NP85 383 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 TOR4AQ9NXH8 423 aa5.93□□□□□ -1.46
CDC42BPA-207ENST00000441725 LCE2BO14633 110 aa5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 RELBQ01201 579 aa5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 NNTQ13423 1086 aa5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 TRIP4Q15650 581 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 NXPE4Q6UWF7 544 aa5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 ERMP1Q7Z2K6 904 aa5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 ITPKCQ96DU7 683 aa5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 DMGDHQ9UI17 866 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-207ENST00000441725 FAM187AA6NFU0 413 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 GIPC1O14908 333 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 PLA2G4AP47712 749 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 IDH3AP50213 366 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 ST13P50502 369 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 PKDCCQ504Y2 493 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 SOGA3Q5TF21 947 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 ZNF438Q7Z4V0 828 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 CYP4X1Q8N118 509 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 RHPN1Q8TCX5 695 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 SNX29Q8TEQ0 813 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 GPRASP2Q96D09 838 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 HSH2DQ96JZ2 352 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 DGAT1O75907 488 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 ALDH1A1P00352 501 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 ZNF746Q6NUN9 644 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 XKR5Q6UX68 686 aa5.91□□□□□ -1.46
CDC42BPA-207ENST00000441725 SUSD3Q96L08 255 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms