RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SLC15A2Q16348 729 aa26.48■■□□□ 1.83
VPS13B-204ENST00000441350 FLAD1Q8NFF5 587 aa26.48■■□□□ 1.83
VPS13B-204ENST00000441350 UBN2Q6ZU65 1347 aa26.48■■□□□ 1.83
VPS13B-204ENST00000441350 H7C1W4 665 aa26.47■■□□□ 1.83
VPS13B-204ENST00000441350 CASP7P55210 303 aa26.47■■□□□ 1.83
VPS13B-204ENST00000441350 CCDC136Q96JN2 1154 aa26.47■■□□□ 1.83
VPS13B-204ENST00000441350 STK32BQ9NY57 414 aa26.47■■□□□ 1.83
VPS13B-204ENST00000441350 QSER1Q2KHR3 1735 aa26.46■■□□□ 1.83
VPS13B-204ENST00000441350 COL23A1Q86Y22 540 aaPredicted RBP26.46■■□□□ 1.83
VPS13B-204ENST00000441350 LRRFIP2Q9Y608 721 aaKnown RBP26.46■■□□□ 1.83
VPS13B-204ENST00000441350 PNPLA7Q6ZV29 1317 aa26.46■■□□□ 1.83
VPS13B-204ENST00000441350 PARP10Q53GL7 1025 aa26.45■■□□□ 1.82
VPS13B-204ENST00000441350 B4GALNT3Q6L9W6 998 aa26.45■■□□□ 1.82
VPS13B-204ENST00000441350 HDAC5Q9UQL6 1122 aa26.45■■□□□ 1.82
VPS13B-204ENST00000441350 NIP7Q9Y221 180 aaKnown RBP eCLIP26.45■■□□□ 1.82
VPS13B-204ENST00000441350 TBC1D9BQ66K14 1250 aa26.44■■□□□ 1.82
VPS13B-204ENST00000441350 UBE3BQ7Z3V4 1068 aa26.44■■□□□ 1.82
VPS13B-204ENST00000441350 PCCAP05165 728 aaPredicted RBP26.43■■□□□ 1.82
VPS13B-204ENST00000441350 GYS1P13807 737 aa26.43■■□□□ 1.82
VPS13B-204ENST00000441350 ILDR2Q71H61 639 aa26.43■■□□□ 1.82
VPS13B-204ENST00000441350 ZBTB38Q8NAP3 1195 aaPredicted RBP26.43■■□□□ 1.82
VPS13B-204ENST00000441350 JARID2Q92833 1246 aaPredicted RBP26.43■■□□□ 1.82
VPS13B-204ENST00000441350 KAZALD1Q96I82 304 aa26.43■■□□□ 1.82
VPS13B-204ENST00000441350 SUSD4Q5VX71 490 aa26.42■■□□□ 1.82
VPS13B-204ENST00000441350 CEP85Q6P2H3 762 aa26.42■■□□□ 1.82
VPS13B-204ENST00000441350 SIRT2Q8IXJ6 389 aa26.42■■□□□ 1.82
VPS13B-204ENST00000441350 RPAP2Q8IXW5 612 aaPredicted RBP26.42■■□□□ 1.82
VPS13B-204ENST00000441350 SUCLG2Q96I99 432 aa26.42■■□□□ 1.82
VPS13B-204ENST00000441350 ANKRD44Q8N8A2 993 aa26.41■■□□□ 1.82
VPS13B-204ENST00000441350 COL24A1Q17RW2 1714 aa26.4■■□□□ 1.82
VPS13B-204ENST00000441350 HDAC1Q13547 482 aaPredicted RBP26.39■■□□□ 1.82
VPS13B-204ENST00000441350 FAM89AQ96GI7 184 aa26.39■■□□□ 1.82
VPS13B-204ENST00000441350 UTP14AQ9BVJ6 771 aaKnown RBP26.39■■□□□ 1.82
VPS13B-204ENST00000441350 TRMT112Q9UI30 125 aaKnown RBP26.39■■□□□ 1.82
VPS13B-204ENST00000441350 CDHR2Q9BYE9 1310 aa26.39■■□□□ 1.81
VPS13B-204ENST00000441350 IGHDP01880 384 aa26.39■■□□□ 1.81
VPS13B-204ENST00000441350 PPP1R42Q7Z4L9 355 aa26.39■■□□□ 1.81
VPS13B-204ENST00000441350 SETDB2Q96T68 719 aa26.39■■□□□ 1.81
VPS13B-204ENST00000441350 NTSR2O95665 410 aa26.38■■□□□ 1.81
VPS13B-204ENST00000441350 RTL5Q5HYW3 569 aaPredicted RBP26.38■■□□□ 1.81
VPS13B-204ENST00000441350 BICDL1Q6ZP65 573 aa26.38■■□□□ 1.81
VPS13B-204ENST00000441350 ATP8B2P98198 1209 aa26.37■■□□□ 1.81
VPS13B-204ENST00000441350 MTX1Q13505 466 aa26.37■■□□□ 1.81
VPS13B-204ENST00000441350 NFIXQ14938 502 aa26.37■■□□□ 1.81
VPS13B-204ENST00000441350 EPHA10Q5JZY3 1008 aa26.37■■□□□ 1.81
VPS13B-204ENST00000441350 RWDD1Q9H446 243 aaPredicted RBP26.37■■□□□ 1.81
VPS13B-204ENST00000441350 MSH5O43196 834 aa26.36■■□□□ 1.81
VPS13B-204ENST00000441350 SYNE4Q8N205 404 aa26.36■■□□□ 1.81
VPS13B-204ENST00000441350 BICC1Q9H694 974 aaKnown RBP26.36■■□□□ 1.81
VPS13B-204ENST00000441350 KDM2BQ8NHM5 1336 aa26.36■■□□□ 1.81
VPS13B-204ENST00000441350 SH3TC1Q8TE82 1336 aa26.36■■□□□ 1.81
VPS13B-204ENST00000441350 TM4SF1P30408 202 aa26.36■■□□□ 1.81
VPS13B-204ENST00000441350 PLA2G12BQ9BX93 195 aa26.36■■□□□ 1.81
VPS13B-204ENST00000441350 FOXO4P98177 505 aa26.35■■□□□ 1.81
VPS13B-204ENST00000441350 RABL6Q3YEC7 729 aaPredicted RBP26.35■■□□□ 1.81
VPS13B-204ENST00000441350 FAM177BA6PVY3 158 aa26.34■■□□□ 1.81
VPS13B-204ENST00000441350 NLGN1Q8N2Q7 840 aa26.34■■□□□ 1.81
VPS13B-204ENST00000441350 CARMIL3Q8ND23 1372 aa26.34■■□□□ 1.81
VPS13B-204ENST00000441350 PNMA6EA0A0J9YXQ4 647 aa26.33■■□□□ 1.81
VPS13B-204ENST00000441350 IRS4O14654 1257 aaPredicted RBP26.32■■□□□ 1.8
VPS13B-204ENST00000441350 SSH3Q8TE77 659 aa26.32■■□□□ 1.8
VPS13B-204ENST00000441350 NYXQ9GZU5 481 aa26.32■■□□□ 1.8
VPS13B-204ENST00000441350 HMMRO75330 724 aa26.32■■□□□ 1.8
VPS13B-204ENST00000441350 POLA2Q14181 598 aa26.32■■□□□ 1.8
VPS13B-204ENST00000441350 CENPQQ7L2Z9 268 aaPredicted RBP26.32■■□□□ 1.8
VPS13B-204ENST00000441350 NBPF5PQ86XG9 351 aaPredicted RBP26.31■■□□□ 1.8
VPS13B-204ENST00000441350 DDX60Q8IY21 1712 aaKnown RBP26.31■■□□□ 1.8
VPS13B-204ENST00000441350 LAMB2P55268 1798 aa26.3■■□□□ 1.8
VPS13B-204ENST00000441350 SRGAP3O43295 1099 aa26.3■■□□□ 1.8
VPS13B-204ENST00000441350 TPTE2Q6XPS3 522 aa26.3■■□□□ 1.8
VPS13B-204ENST00000441350 NUTM1Q86Y26 1132 aa26.3■■□□□ 1.8
VPS13B-204ENST00000441350 DDR1Q08345 913 aa26.29■■□□□ 1.8
VPS13B-204ENST00000441350 ERFEQ4G0M1 354 aa26.29■■□□□ 1.8
VPS13B-204ENST00000441350 SLC10A5Q5PT55 438 aa26.29■■□□□ 1.8
VPS13B-204ENST00000441350 MYH3P11055 1940 aa26.29■■□□□ 1.8
VPS13B-204ENST00000441350 PDE8AO60658 829 aa26.28■■□□□ 1.8
VPS13B-204ENST00000441350 LMBR1LQ6UX01 489 aa26.28■■□□□ 1.8
VPS13B-204ENST00000441350 POLRMTO00411 1230 aaKnown RBP26.28■■□□□ 1.8
VPS13B-204ENST00000441350 CSF1RP07333 972 aa26.28■■□□□ 1.8
VPS13B-204ENST00000441350 HSP90B1P14625 803 aaKnown RBP26.28■■□□□ 1.8
VPS13B-204ENST00000441350 SMC5Q8IY18 1101 aa26.28■■□□□ 1.8
VPS13B-204ENST00000441350 PDGFDQ9GZP0 370 aaPredicted RBP26.28■■□□□ 1.8
VPS13B-204ENST00000441350 HCLS1P14317 486 aaPredicted RBP26.27■■□□□ 1.8
VPS13B-204ENST00000441350 DCTPP1Q9H773 170 aa26.27■■□□□ 1.8
VPS13B-204ENST00000441350 SERPINB2P05120 415 aa26.26■■□□□ 1.79
VPS13B-204ENST00000441350 CTSWP56202 376 aa26.26■■□□□ 1.79
VPS13B-204ENST00000441350 GTF2E1P29083 439 aaPredicted RBP26.25■■□□□ 1.79
VPS13B-204ENST00000441350 TTLL11Q8NHH1 800 aa26.25■■□□□ 1.79
VPS13B-204ENST00000441350 ABCC12Q96J65 1359 aa26.25■■□□□ 1.79
VPS13B-204ENST00000441350 CNBD1Q8NA66 436 aa26.25■■□□□ 1.79
VPS13B-204ENST00000441350 SLC16A10Q8TF71 515 aa26.25■■□□□ 1.79
VPS13B-204ENST00000441350 RFX5P48382 616 aaPredicted RBP26.24■■□□□ 1.79
VPS13B-204ENST00000441350 MSL1Q68DK7 614 aa26.24■■□□□ 1.79
VPS13B-204ENST00000441350 GCC1Q96CN9 775 aa26.24■■□□□ 1.79
VPS13B-204ENST00000441350 NRXN2Q9P2S2 1712 aa26.24■■□□□ 1.79
VPS13B-204ENST00000441350 MMP10P09238 476 aa26.23■■□□□ 1.79
VPS13B-204ENST00000441350 PRR5LQ6MZQ0 368 aa26.23■■□□□ 1.79
VPS13B-204ENST00000441350 CASZ1Q86V15 1759 aa26.22■■□□□ 1.79
VPS13B-204ENST00000441350 NOP58Q9Y2X3 529 aaKnown RBP26.21■■□□□ 1.79
VPS13B-204ENST00000441350 RIC1Q4ADV7 1423 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms