RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 ANKRD13DQ6ZTN6 518 aa26.88■■□□□ 1.89
VIL1-204ENST00000440053 TSPYL6Q8N831 410 aa26.88■■□□□ 1.89
VIL1-204ENST00000440053 SLC51AQ86UW1 340 aa26.87■■□□□ 1.89
VIL1-204ENST00000440053 TAOK3Q9H2K8 898 aa26.87■■□□□ 1.89
VIL1-204ENST00000440053 PHAXQ9H814 394 aaKnown RBP26.87■■□□□ 1.89
VIL1-204ENST00000440053 IBTKQ9P2D0 1353 aaPredicted RBP26.87■■□□□ 1.89
VIL1-204ENST00000440053 PLBD2Q8NHP8 589 aa26.87■■□□□ 1.89
VIL1-204ENST00000440053 HYPKQ9NX55 129 aa26.87■■□□□ 1.89
VIL1-204ENST00000440053 KDM2BQ8NHM5 1336 aa26.86■■□□□ 1.89
VIL1-204ENST00000440053 CCDC27Q2M243 656 aa26.86■■□□□ 1.89
VIL1-204ENST00000440053 HSP90AB3PQ58FF7 597 aa26.86■■□□□ 1.89
VIL1-204ENST00000440053 ATP5J2-PTCD1G3V325 749 aa26.85■■□□□ 1.89
VIL1-204ENST00000440053 TCERG1O14776 1098 aaKnown RBP26.85■■□□□ 1.89
VIL1-204ENST00000440053 HCLS1P14317 486 aaPredicted RBP26.85■■□□□ 1.89
VIL1-204ENST00000440053 CCDC93Q567U6 631 aa26.85■■□□□ 1.89
VIL1-204ENST00000440053 SLC10A5Q5PT55 438 aa26.85■■□□□ 1.89
VIL1-204ENST00000440053 SOGA3Q5TF21 947 aa26.85■■□□□ 1.89
VIL1-204ENST00000440053 FAM9BQ8IZU0 186 aa26.85■■□□□ 1.89
VIL1-204ENST00000440053 RPGRQ92834 1020 aaKnown RBP26.85■■□□□ 1.89
VIL1-204ENST00000440053 FER1L6Q2WGJ9 1857 aa26.84■■□□□ 1.89
VIL1-204ENST00000440053 CCDC88AQ3V6T2 1871 aa26.84■■□□□ 1.89
VIL1-204ENST00000440053 LTBP3Q9NS15 1303 aa26.84■■□□□ 1.89
VIL1-204ENST00000440053 GLTPD2A6NH11 291 aa26.84■■□□□ 1.89
VIL1-204ENST00000440053 HOXA10P31260 410 aaPredicted RBP26.84■■□□□ 1.89
VIL1-204ENST00000440053 TRMT112Q9UI30 125 aaKnown RBP26.84■■□□□ 1.89
VIL1-204ENST00000440053 NLRP3Q96P20 1036 aa26.83■■□□□ 1.89
VIL1-204ENST00000440053 TOMM70O94826 608 aa26.82■■□□□ 1.88
VIL1-204ENST00000440053 ZNF277Q9NRM2 450 aaPredicted RBP26.82■■□□□ 1.88
VIL1-204ENST00000440053 RBM17Q96I25 401 aaKnown RBP26.81■■□□□ 1.88
VIL1-204ENST00000440053 ARFGEF2Q9Y6D5 1785 aa26.81■■□□□ 1.88
VIL1-204ENST00000440053 ZC3H4Q9UPT8 1303 aaKnown RBP26.81■■□□□ 1.88
VIL1-204ENST00000440053 FKBP4Q02790 459 aaKnown RBP eCLIP26.81■■□□□ 1.88
VIL1-204ENST00000440053 ISCA1Q9BUE6 129 aa26.81■■□□□ 1.88
VIL1-204ENST00000440053 RIC1Q4ADV7 1423 aa26.8■■□□□ 1.88
VIL1-204ENST00000440053 CRAMP1Q96RY5 1269 aa26.8■■□□□ 1.88
VIL1-204ENST00000440053 RTKN2Q8IZC4 609 aa26.79■■□□□ 1.88
VIL1-204ENST00000440053 POTECB2RU33 542 aa26.78■■□□□ 1.88
VIL1-204ENST00000440053 RTL5Q5HYW3 569 aaPredicted RBP26.78■■□□□ 1.88
VIL1-204ENST00000440053 RIC3Q7Z5B4 369 aa26.78■■□□□ 1.88
VIL1-204ENST00000440053 C16orf71Q8IYS4 520 aaPredicted RBP26.78■■□□□ 1.88
VIL1-204ENST00000440053 FAM89AQ96GI7 184 aa26.78■■□□□ 1.88
VIL1-204ENST00000440053 HSPA6P17066 643 aa26.77■■□□□ 1.88
VIL1-204ENST00000440053 CCDC30Q5VVM6 783 aa26.77■■□□□ 1.88
VIL1-204ENST00000440053 DPY19L2Q6NUT2 758 aa26.77■■□□□ 1.88
VIL1-204ENST00000440053 SH3TC1Q8TE82 1336 aa26.77■■□□□ 1.88
VIL1-204ENST00000440053 DDNO94850 711 aaPredicted RBP26.76■■□□□ 1.87
VIL1-204ENST00000440053 TIAM2Q8IVF5 1701 aa26.76■■□□□ 1.87
VIL1-204ENST00000440053 PPEF1O14829 653 aaPredicted RBP26.75■■□□□ 1.87
VIL1-204ENST00000440053 NCBP3Q53F19 620 aaKnown RBP26.75■■□□□ 1.87
VIL1-204ENST00000440053 ANKRD36CQ5JPF3 1778 aa26.75■■□□□ 1.87
VIL1-204ENST00000440053 GOLGA2Q08379 1002 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 TWISTNBQ3B726 338 aaPredicted RBP26.74■■□□□ 1.87
VIL1-204ENST00000440053 ABCC4O15439 1325 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 IL16Q14005 1332 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 RNF123Q5XPI4 1314 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 SNED1Q8TER0 1413 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 CEP350Q5VT06 3117 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 VEGFAP15692 232 aaPredicted RBP26.74■■□□□ 1.87
VIL1-204ENST00000440053 RBM46Q8TBY0 533 aaKnown RBP26.74■■□□□ 1.87
VIL1-204ENST00000440053 MYD88Q99836 296 aa26.74■■□□□ 1.87
VIL1-204ENST00000440053 SPINK5Q9NQ38 1064 aaPredicted RBP26.74■■□□□ 1.87
VIL1-204ENST00000440053 IARSP41252 1262 aaKnown RBP26.72■■□□□ 1.87
VIL1-204ENST00000440053 TRIM28Q13263 835 aaKnown RBP26.72■■□□□ 1.87
VIL1-204ENST00000440053 WDR63Q8IWG1 891 aa26.72■■□□□ 1.87
VIL1-204ENST00000440053 JARID2Q92833 1246 aaPredicted RBP26.72■■□□□ 1.87
VIL1-204ENST00000440053 G2E3Q7L622 706 aa26.71■■□□□ 1.87
VIL1-204ENST00000440053 PSMD1Q99460 953 aa26.71■■□□□ 1.87
VIL1-204ENST00000440053 FANCIQ9NVI1 1328 aa26.71■■□□□ 1.87
VIL1-204ENST00000440053 DICER1Q9UPY3 1922 aaKnown RBP26.71■■□□□ 1.87
VIL1-204ENST00000440053 CC2D2BQ6DHV5 1058 aa26.7■■□□□ 1.87
VIL1-204ENST00000440053 DDX46Q7L014 1031 aaKnown RBP26.69■■□□□ 1.86
VIL1-204ENST00000440053 ATP6V0A2Q9Y487 856 aa26.69■■□□□ 1.86
VIL1-204ENST00000440053 ZNF541Q9H0D2 1346 aa26.69■■□□□ 1.86
VIL1-204ENST00000440053 SLC4A2P04920 1241 aa26.68■■□□□ 1.86
VIL1-204ENST00000440053 MAP3K2Q9Y2U5 619 aa26.68■■□□□ 1.86
VIL1-204ENST00000440053 IRS4O14654 1257 aaPredicted RBP26.68■■□□□ 1.86
VIL1-204ENST00000440053 EXOSC9Q06265 439 aaKnown RBP26.68■■□□□ 1.86
VIL1-204ENST00000440053 METTL22Q9BUU2 404 aaPredicted RBP26.68■■□□□ 1.86
VIL1-204ENST00000440053 STK31Q9BXU1 1019 aa26.68■■□□□ 1.86
VIL1-204ENST00000440053 PI4KAP2A4QPH2 592 aa26.67■■□□□ 1.86
VIL1-204ENST00000440053 BBOX1O75936 387 aa26.67■■□□□ 1.86
VIL1-204ENST00000440053 PI4KAP1Q8N8J0 262 aa26.67■■□□□ 1.86
VIL1-204ENST00000440053 CHMP4AQ9BY43 222 aa26.67■■□□□ 1.86
VIL1-204ENST00000440053 LAMB2P55268 1798 aa26.66■■□□□ 1.86
VIL1-204ENST00000440053 VAMP4O75379 141 aa26.66■■□□□ 1.86
VIL1-204ENST00000440053 DDX58O95786 925 aaKnown RBP26.66■■□□□ 1.86
VIL1-204ENST00000440053 GRAPQ13588 217 aa26.66■■□□□ 1.86
VIL1-204ENST00000440053 GRAPLQ8TC17 118 aaPredicted RBP26.66■■□□□ 1.86
VIL1-204ENST00000440053 KSR2Q6VAB6 950 aa26.65■■□□□ 1.86
VIL1-204ENST00000440053 SP8Q8IXZ3 490 aa26.65■■□□□ 1.86
VIL1-204ENST00000440053 ZBTB38Q8NAP3 1195 aaPredicted RBP26.65■■□□□ 1.86
VIL1-204ENST00000440053 COL4A5P29400 1685 aa26.64■■□□□ 1.86
VIL1-204ENST00000440053 FZD9O00144 591 aa26.64■■□□□ 1.86
VIL1-204ENST00000440053 HTRA3P83110 453 aa26.64■■□□□ 1.86
VIL1-204ENST00000440053 FSTL1Q12841 308 aa26.64■■□□□ 1.86
VIL1-204ENST00000440053 SF3B3Q15393 1217 aaKnown RBP26.64■■□□□ 1.86
VIL1-204ENST00000440053 CELF1Q92879 486 aaKnown RBP26.64■■□□□ 1.86
VIL1-204ENST00000440053 WDR90Q96KV7 1748 aa26.64■■□□□ 1.85
VIL1-204ENST00000440053 IGKV5-2P06315 115 aa26.63■■□□□ 1.85
VIL1-204ENST00000440053 CCDC191Q8NCU4 936 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms