RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PCMTD1Q96MG8 357 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P37-201ENST00000439613 CHMP4AQ9BY43 222 aa5.09□□□□□ -1.59
HMGB1P37-201ENST00000439613 CACNA1FO60840 1977 aa5.09□□□□□ -1.6
HMGB1P37-201ENST00000439613 CAMTA1Q9Y6Y1 1673 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 AHDC1Q5TGY3 1603 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 NCAPD2Q15021 1401 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 KIAA0232Q92628 1395 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 MAP3K5Q99683 1374 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 SOS1Q07889 1333 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 GJA5P36382 358 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 RSBN1LQ6PCB5 846 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 BLOC1S3Q6QNY0 202 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 SCUBE3Q8IX30 993 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 CABLES1Q8TDN4 633 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 RAPGEF4Q8WZA2 1011 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 TSR2Q969E8 191 aaKnown RBP5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 CCDC136Q96JN2 1154 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 GOPCQ9HD26 462 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 PRDM11Q9NQV5 511 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 NLRP2Q9NX02 1062 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 LAS1LQ9Y4W2 734 aaKnown RBP5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 LMO7Q8WWI1 1683 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 ROBO1Q9Y6N7 1651 aa5.08□□□□□ -1.6
HMGB1P37-201ENST00000439613 OVOS2A0A0G2JMS6 1433 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 KIF16BQ96L93 1317 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 ABCA3Q99758 1704 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 SPTLC1O15269 473 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 PLIN1O60240 522 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 NR1I2O75469 434 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 BCAR3O75815 825 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 CSB-PGBD3P0DP91 1061 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 FDX1P10109 184 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 TATP17735 454 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 COPS2P61201 443 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 TAF7Q15545 349 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 AKAP4Q5JQC9 854 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 TJAP1Q5JTD0 557 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 C1orf141Q5JVX7 400 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 ZKSCAN2Q63HK3 967 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 ZNF530Q6P9A1 599 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 SYMPKQ92797 1274 aaKnown RBP5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 MTRQ99707 1265 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 CHMP4BQ9H444 224 aaKnown RBP5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 IL21Q9HBE4 155 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 MBIPQ9NS73 344 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 SMC4Q9NTJ3 1288 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 PCDHGC3Q9UN70 934 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 SPG7Q9UQ90 795 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 SLC27A5Q9Y2P5 690 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 PCDHB15Q9Y5E8 787 aa5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 COL22A1Q8NFW1 1626 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P37-201ENST00000439613 CRB1P82279 1406 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 WDR17Q8IZU2 1322 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 FAM83GA6ND36 823 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 VAMP4O75379 141 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 EVA1CP58658 441 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 QPCTQ16769 361 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 TUSC1Q2TAM9 212 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 TWISTNBQ3B726 338 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 MCM10Q7L590 875 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 USHBP1Q8N6Y0 703 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 EXOC6Q8TAG9 804 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 SSH1Q8WYL5 1049 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 ARHGAP45Q92619 1136 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 FRAT1Q92837 279 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 THUMPD2Q9BTF0 503 aaKnown RBP5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 VIRMAQ69YN4 1812 aaKnown RBP5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 COL14A1Q05707 1796 aaKnown RBP5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 PHLPP1O60346 1717 aa5.06□□□□□ -1.6
HMGB1P37-201ENST00000439613 CEMIPQ8WUJ3 1361 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 LRRC37A3O60309 1634 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 ZPR1O75312 459 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 HSP90AB1P08238 724 aaKnown RBP5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 KCNC4Q03721 635 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 TEFQ10587 303 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 DCTN1Q14203 1278 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 CHRNA2Q15822 529 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 Q3C1V9 767 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 TOM1L2Q6ZVM7 507 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 FTSJ3Q8IY81 847 aaKnown RBP5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 DZIP1LQ8IYY4 767 aaKnown RBP5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 C8orf58Q8NAV2 365 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 IL17REQ8NFR9 667 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 ZNF516Q92618 1163 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 CRBNQ96SW2 442 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 CARD10Q9BWT7 1032 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 TSPYL4Q9UJ04 414 aa5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 PARP4Q9UKK3 1724 aaKnown RBP5.05□□□□□ -1.6
HMGB1P37-201ENST00000439613 SCN11AQ9UI33 1791 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 PKD1L3Q7Z443 1732 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 UBAP1LF5GYI3 381 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 RNMTO43148 476 aaKnown RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 FMNL1O95466 1100 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 HOXB7P09629 217 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 RTL5Q5HYW3 569 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 C20orf194Q5TEA3 1177 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 PRPF38BQ5VTL8 546 aaKnown RBP5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 B4GALNT3Q6L9W6 998 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 BRICD5Q6PL45 260 aa5.04□□□□□ -1.6
HMGB1P37-201ENST00000439613 ATF7IPQ6VMQ6 1270 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms