RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 RBM17Q96I25 401 aaKnown RBP24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 ANKRD36CQ5JPF3 1778 aa24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 DDNO94850 711 aaPredicted RBP24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 HDGFL1Q5TGJ6 251 aa24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 NLRP3Q96P20 1036 aa24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 CC2D2BQ6DHV5 1058 aa24.01■■□□□ 1.43
AC004540.1-201ENST00000439120 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
AC004540.1-201ENST00000439120 HOXB7P09629 217 aa24■■□□□ 1.43
AC004540.1-201ENST00000439120 HOXA10P31260 410 aaPredicted RBP24■■□□□ 1.43
AC004540.1-201ENST00000439120 CALD1Q05682 793 aaKnown RBP24■■□□□ 1.43
AC004540.1-201ENST00000439120 SYNE4Q8N205 404 aa24■■□□□ 1.43
AC004540.1-201ENST00000439120 TMX4Q9H1E5 349 aaPredicted RBP24■■□□□ 1.43
AC004540.1-201ENST00000439120 CHPF2Q9P2E5 772 aa24■■□□□ 1.43
AC004540.1-201ENST00000439120 POTECB2RU33 542 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 APAF1O14727 1248 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 CRAMP1Q96RY5 1269 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 RNF123Q5XPI4 1314 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 IQCA1LA6NCM1 817 aa23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 PPEF1O14829 653 aaPredicted RBP23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 HTRA3P83110 453 aa23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 GRIPAP1Q4V328 841 aa23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 DBF4Q9UBU7 674 aaPredicted RBP23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 DNAJC5GQ8N7S2 189 aa23.97■■□□□ 1.43
AC004540.1-201ENST00000439120 JDP2Q8WYK2 163 aa23.97■■□□□ 1.43
AC004540.1-201ENST00000439120 PSMD1Q99460 953 aa23.97■■□□□ 1.43
AC004540.1-201ENST00000439120 TCERG1O14776 1098 aaKnown RBP23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 TCIRG1Q13488 830 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 NLRP10Q86W26 655 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 MBIPQ9NS73 344 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 TRMT112Q9UI30 125 aaKnown RBP23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 GNAI1P63096 354 aa23.95■■□□□ 1.42
AC004540.1-201ENST00000439120 SLC10A5Q5PT55 438 aa23.95■■□□□ 1.42
AC004540.1-201ENST00000439120 C3orf67Q6ZVT6 689 aa23.95■■□□□ 1.42
AC004540.1-201ENST00000439120 SCN4AP35499 1836 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 ZNF541Q9H0D2 1346 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 PLBD2Q8NHP8 589 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 KLRG1Q96E93 195 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 IFT57Q9NWB7 429 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 HYPKQ9NX55 129 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 CHADLQ6NUI6 762 aa23.93■■□□□ 1.42
AC004540.1-201ENST00000439120 ANKRD13DQ6ZTN6 518 aa23.93■■□□□ 1.42
AC004540.1-201ENST00000439120 L3MBTL3Q96JM7 780 aaPredicted RBP23.93■■□□□ 1.42
AC004540.1-201ENST00000439120 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
AC004540.1-201ENST00000439120 HCLS1P14317 486 aaPredicted RBP23.92■■□□□ 1.42
AC004540.1-201ENST00000439120 SNED1Q8TER0 1413 aa23.92■■□□□ 1.42
AC004540.1-201ENST00000439120 LARGE2Q8N3Y3 721 aa23.91■■□□□ 1.42
AC004540.1-201ENST00000439120 LAMB2P55268 1798 aa23.91■■□□□ 1.42
AC004540.1-201ENST00000439120 ABCC4O15439 1325 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 FZD9O00144 591 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 ZNF853P0CG23 659 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 EIF6P56537 245 aaKnown RBP23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 DDX46Q7L014 1031 aaKnown RBP23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 HACL1Q9UJ83 578 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 GPC2Q8N158 579 aa23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 ZNF428Q96B54 188 aa23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 TAF1DQ9H5J8 278 aaPredicted RBP23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 ATP6V0A2Q9Y487 856 aa23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 ELL2O00472 640 aaPredicted RBP23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 POTEIP0CG38 1075 aa23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 POTEJP0CG39 1038 aa23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 EAPPQ56P03 285 aaPredicted RBP23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 LDHDQ86WU2 507 aa23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 BBOX1O75936 387 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 GOLGA2Q08379 1002 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 NIM1KQ8IY84 436 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 GJA3Q9Y6H8 435 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 PPIP5K2O43314 1243 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 EPHX2P34913 555 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 RIC3Q7Z5B4 369 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 SUPT20HQ8NEM7 779 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 SLC51AQ86UW1 340 aa23.85■■□□□ 1.41
AC004540.1-201ENST00000439120 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
AC004540.1-201ENST00000439120 LMOD1P29536 600 aaPredicted RBP23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 DPP8Q6V1X1 898 aaPredicted RBP23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 PNMA8AQ86V59 439 aaPredicted RBP23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 FAM89AQ96GI7 184 aa23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 GRAPQ13588 217 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 AOC3Q16853 763 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 CCDC184Q52MB2 194 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 SP8Q8IXZ3 490 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 JMYQ8N9B5 988 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 DDX60Q8IY21 1712 aaKnown RBP23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 COL4A5P29400 1685 aa23.83■■□□□ 1.4
AC004540.1-201ENST00000439120 ANP32CO43423 234 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 RTL5Q5HYW3 569 aaPredicted RBP23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 CCDC30Q5VVM6 783 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 TMC4Q7Z404 712 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 MPNDQ8N594 471 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 C8orf58Q8NAV2 365 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms