RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 KRT24Q2M2I5 525 aa24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 RBM17Q96I25 401 aaKnown RBP24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
AC004540.1-201ENST00000439120 ANKRD36CQ5JPF3 1778 aa24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 DDNO94850 711 aaPredicted RBP24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 HDGFL1Q5TGJ6 251 aa24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 NLRP3Q96P20 1036 aa24.02■■□□□ 1.44
AC004540.1-201ENST00000439120 CC2D2BQ6DHV5 1058 aa24.01■■□□□ 1.43
AC004540.1-201ENST00000439120 CFAP44Q96MT7 982 aa24.01■■□□□ 1.43
AC004540.1-201ENST00000439120 HOXB7P09629 217 aa24■■□□□ 1.43
AC004540.1-201ENST00000439120 HOXA10P31260 410 aaPredicted RBP24■■□□□ 1.43
AC004540.1-201ENST00000439120 CALD1Q05682 793 aaKnown RBP24■■□□□ 1.43
AC004540.1-201ENST00000439120 SYNE4Q8N205 404 aa24■■□□□ 1.43
AC004540.1-201ENST00000439120 TMX4Q9H1E5 349 aaPredicted RBP24■■□□□ 1.43
AC004540.1-201ENST00000439120 CHPF2Q9P2E5 772 aa24■■□□□ 1.43
AC004540.1-201ENST00000439120 POTECB2RU33 542 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 APAF1O14727 1248 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 IARSP41252 1262 aaKnown RBP23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 CRAMP1Q96RY5 1269 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 RNF123Q5XPI4 1314 aa23.99■■□□□ 1.43
AC004540.1-201ENST00000439120 IQCA1LA6NCM1 817 aa23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 PPEF1O14829 653 aaPredicted RBP23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 HTRA3P83110 453 aa23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 GRIPAP1Q4V328 841 aa23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 DBF4Q9UBU7 674 aaPredicted RBP23.98■■□□□ 1.43
AC004540.1-201ENST00000439120 DNAJC5GQ8N7S2 189 aa23.97■■□□□ 1.43
AC004540.1-201ENST00000439120 JDP2Q8WYK2 163 aa23.97■■□□□ 1.43
AC004540.1-201ENST00000439120 PSMD1Q99460 953 aa23.97■■□□□ 1.43
AC004540.1-201ENST00000439120 TCERG1O14776 1098 aaKnown RBP23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 TCIRG1Q13488 830 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 NLRP10Q86W26 655 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 MBIPQ9NS73 344 aa23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 TRMT112Q9UI30 125 aaKnown RBP23.96■■□□□ 1.43
AC004540.1-201ENST00000439120 GNAI1P63096 354 aa23.95■■□□□ 1.42
AC004540.1-201ENST00000439120 SLC10A5Q5PT55 438 aa23.95■■□□□ 1.42
AC004540.1-201ENST00000439120 C3orf67Q6ZVT6 689 aa23.95■■□□□ 1.42
AC004540.1-201ENST00000439120 SCN4AP35499 1836 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 ZNF541Q9H0D2 1346 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 PLBD2Q8NHP8 589 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 KLRG1Q96E93 195 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 IFT57Q9NWB7 429 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 HYPKQ9NX55 129 aa23.94■■□□□ 1.42
AC004540.1-201ENST00000439120 CHADLQ6NUI6 762 aa23.93■■□□□ 1.42
AC004540.1-201ENST00000439120 ANKRD13DQ6ZTN6 518 aa23.93■■□□□ 1.42
AC004540.1-201ENST00000439120 L3MBTL3Q96JM7 780 aaPredicted RBP23.93■■□□□ 1.42
AC004540.1-201ENST00000439120 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
AC004540.1-201ENST00000439120 HCLS1P14317 486 aaPredicted RBP23.92■■□□□ 1.42
AC004540.1-201ENST00000439120 SNED1Q8TER0 1413 aa23.92■■□□□ 1.42
AC004540.1-201ENST00000439120 LARGE2Q8N3Y3 721 aa23.91■■□□□ 1.42
AC004540.1-201ENST00000439120 LAMB2P55268 1798 aa23.91■■□□□ 1.42
AC004540.1-201ENST00000439120 ABCC4O15439 1325 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 FZD9O00144 591 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 ZNF853P0CG23 659 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 EIF6P56537 245 aaKnown RBP23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 DDX46Q7L014 1031 aaKnown RBP23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 HACL1Q9UJ83 578 aa23.9■■□□□ 1.42
AC004540.1-201ENST00000439120 GPC2Q8N158 579 aa23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 ZNF428Q96B54 188 aa23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 TAF1DQ9H5J8 278 aaPredicted RBP23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 ATP6V0A2Q9Y487 856 aa23.89■■□□□ 1.41
AC004540.1-201ENST00000439120 ELL2O00472 640 aaPredicted RBP23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 POTEIP0CG38 1075 aa23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 POTEJP0CG39 1038 aa23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 EAPPQ56P03 285 aaPredicted RBP23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 LDHDQ86WU2 507 aa23.88■■□□□ 1.41
AC004540.1-201ENST00000439120 ATP5J2-PTCD1G3V325 749 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 BBOX1O75936 387 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 GOLGA2Q08379 1002 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 NIM1KQ8IY84 436 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 CHMP4AQ9BY43 222 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 GJA3Q9Y6H8 435 aa23.87■■□□□ 1.41
AC004540.1-201ENST00000439120 PPIP5K2O43314 1243 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 EPHX2P34913 555 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 RIC3Q7Z5B4 369 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 SUPT20HQ8NEM7 779 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
AC004540.1-201ENST00000439120 SLC51AQ86UW1 340 aa23.85■■□□□ 1.41
AC004540.1-201ENST00000439120 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
AC004540.1-201ENST00000439120 LMOD1P29536 600 aaPredicted RBP23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 DPP8Q6V1X1 898 aaPredicted RBP23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 PNMA8AQ86V59 439 aaPredicted RBP23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 FAM89AQ96GI7 184 aa23.84■■□□□ 1.41
AC004540.1-201ENST00000439120 GRAPQ13588 217 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 AOC3Q16853 763 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 CCDC184Q52MB2 194 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 SP8Q8IXZ3 490 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 JMYQ8N9B5 988 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 DDX60Q8IY21 1712 aaKnown RBP23.83■■□□□ 1.41
AC004540.1-201ENST00000439120 COL4A5P29400 1685 aa23.83■■□□□ 1.4
AC004540.1-201ENST00000439120 ANP32CO43423 234 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 RTL5Q5HYW3 569 aaPredicted RBP23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 CCDC30Q5VVM6 783 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 TMC4Q7Z404 712 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 MPNDQ8N594 471 aa23.82■■□□□ 1.4
AC004540.1-201ENST00000439120 C8orf58Q8NAV2 365 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms