RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 C11orf96Q7Z7L8 435 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 EHBP1Q8NDI1 1231 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 SRPK1Q96SB4 655 aaKnown RBP7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 MAF1Q9H063 256 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 SAP130Q9H0E3 1048 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 NEUROD4Q9HD90 331 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 AAASQ9NRG9 546 aa7.08□□□□□ -1.28
HMGB3P10-201ENST00000434734 FAM221BA6H8Z2 402 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 CTHP32929 405 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 EIF1AXP47813 144 aaKnown RBP7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 MAP9Q49MG5 647 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 ZNF511Q8NB15 262 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 MKL1Q969V6 931 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 COL26A1Q96A83 441 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 CITED4Q96RK1 184 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 FANCLQ9NW38 375 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 SNTG2Q9NY99 539 aa7.07□□□□□ -1.28
HMGB3P10-201ENST00000434734 AXIN1O15169 862 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 SIAH2O43255 324 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 VARSP26640 1264 aaKnown RBP7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 NBPF6Q5VWK0 638 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 MPNDQ8N594 471 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 BAP1Q92560 729 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 TSR2Q969E8 191 aaKnown RBP7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 ALKBH8Q96BT7 664 aaKnown RBP7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 GPRASP2Q96D09 838 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 NBPF4Q96M43 638 aa7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 TYW1Q9NV66 732 aaKnown RBP7.06□□□□□ -1.28
HMGB3P10-201ENST00000434734 CDC45O75419 566 aa7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 RASA3Q14644 834 aa7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 HS2ST1Q7LGA3 356 aa7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 FAM9BQ8IZU0 186 aa7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 GNL3LQ9NVN8 582 aaKnown RBP7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 GGT7Q9UJ14 662 aa7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 AK5Q9Y6K8 562 aa7.05□□□□□ -1.28
HMGB3P10-201ENST00000434734 J3QL48 77 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 AAMPQ13685 434 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 ALG1LQ6GMV1 187 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 CLEC4GQ6UXB4 293 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 FERMT3Q86UX7 667 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 PRPF38AQ8NAV1 312 aaKnown RBP7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 ADAM32Q8TC27 787 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 C8orf48Q96LL4 319 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 FRMD6Q96NE9 622 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 EID1Q9Y6B2 187 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 RPS6KL1Q9Y6S9 549 aa7.04□□□□□ -1.28
HMGB3P10-201ENST00000434734 ESPNB1AK53 854 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 ST8SIA5O15466 376 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 ALDH1A1P00352 501 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 GYS2P54840 703 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 UBE4AQ14139 1066 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 PGBD3Q8N328 593 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 GPATCH11Q8N954 259 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 DEPDC7Q96QD5 511 aa7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 SLKQ9H2G2 1235 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P10-201ENST00000434734 ESYT3A0FGR9 886 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 CCDC189A1A4V9 331 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 WDHD1O75717 1129 aaPredicted RBP7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 PDE6BP35913 854 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 ETFBP38117 255 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 PTK2Q05397 1052 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 NBPF14Q5TI25 921 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 ANKS3Q6ZW76 656 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 HNRNPLLQ8WVV9 542 aaKnown RBP7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 COPRSQ9NQ92 184 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 SIRPGQ9P1W8 387 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 TCEAL9Q9UHQ7 104 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 MRVI1Q9Y6F6 885 aa7.02□□□□□ -1.29
HMGB3P10-201ENST00000434734 CCDC85CA6NKD9 419 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 HMGB1P1B2RPK0 211 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 FOXO3O43524 673 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 SSBP05455 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 HCLS1P14317 486 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 IGFBP4P22692 258 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 MEI1Q5TIA1 1274 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 PDXDC2PQ6P474 469 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 KIAA0907Q7Z7F0 614 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 BPHLQ86WA6 291 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 ATCAYQ86WG3 371 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 WDR75Q8IWA0 830 aaKnown RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 LILRB2Q8N423 598 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 HPS1Q92902 700 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 GPKOWQ92917 476 aaPredicted RBP eCLIP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 SLC39A13Q96H72 371 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 FAM126AQ9BYI3 521 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 GEMIN8Q9NWZ8 242 aaKnown RBP7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 CNTN3Q9P232 1028 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 GPSM3Q9Y4H4 160 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 WASF2Q9Y6W5 498 aa7.01□□□□□ -1.29
HMGB3P10-201ENST00000434734 KLF4O43474 513 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms