RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CHL1O00533 1208 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 ANAPC15P60006 121 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 BMS1Q14692 1282 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 ZSCAN25Q6NSZ9 544 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 FAM177A1Q8N128 213 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 ANKRD24Q8TF21 1146 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 LRRC59Q96AG4 307 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 ORAI2Q96SN7 254 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 SLFN14P0C7P3 912 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 HSP90B1P14625 803 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 G3BP1Q13283 466 aaKnown RBP eCLIP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 DHX37Q8IY37 1157 aaKnown RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 CBX8Q9HC52 389 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 PDRG1Q9NUG6 133 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 AP5Z1O43299 807 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 GCP02774 474 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 ZKSCAN1P17029 563 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 IRX3P78415 501 aaPredicted RBP8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 STRN4Q9NRL3 753 aa8.72□□□□□ -1.01
SYNPO2-203ENST00000434046 USP6P35125 1406 aa8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 SRGAP3O43295 1099 aa8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 SLU7O95391 586 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 TMCO3Q6UWJ1 677 aa8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 TOM1L2Q6ZVM7 507 aa8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 CLASRPQ8N2M8 674 aaKnown RBP8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 MSH6P52701 1360 aa8.71□□□□□ -1.01
SYNPO2-203ENST00000434046 CTIFO43310 598 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 SMC2O95347 1197 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 LIG1P18858 919 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 ZNF75DP51815 510 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 C10orf67Q8IYJ2 551 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 UBXN4Q92575 508 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC9Q9Y3X0 531 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 CYP46A1Q9Y6A2 500 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 ANXA1P04083 346 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 MYL6BP14649 208 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 PRPF40BQ6NWY9 871 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 CACTINQ8WUQ7 758 aaKnown RBP8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 IP6K1Q92551 441 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 TCEANC2Q96MN5 208 aa8.71□□□□□ -1.02
SYNPO2-203ENST00000434046 TPM4P67936 248 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 KMT5BQ4FZB7 885 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 TAF7LQ5H9L4 462 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 FBXO38Q6PIJ6 1188 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 NEK11Q8NG66 645 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 C19orf44Q9H6X5 657 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 USP16Q9Y5T5 823 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 LRRFIP2Q9Y608 721 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 TMEM131LA2VDJ0 1609 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 CABP4P57796 275 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 CNTROBQ8N137 903 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 TSPYL1Q9H0U9 437 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC171Q6TFL3 1326 aa8.7□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC69A6NI79 296 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 SNW1Q13573 536 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 SKIDA1Q1XH10 827 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 ERCC6LQ2NKX8 1250 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 ARHGAP29Q52LW3 1261 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 PNPLA6Q8IY17 1366 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 HNRNPH2P55795 449 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 CCDC73Q6ZRK6 1079 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 G2E3Q7L622 706 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 UNC5CLQ8IV45 518 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 ERO1AQ96HE7 468 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 MORC2Q9Y6X9 1032 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 MAP3K5Q99683 1374 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 MED14O60244 1454 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 CDK12Q9NYV4 1490 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 PDCP20941 246 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 RUFY2Q8WXA3 655 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 DNAAF4Q8WXU2 420 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 DBF4Q9UBU7 674 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 MRVI1Q9Y6F6 885 aa8.69□□□□□ -1.02
SYNPO2-203ENST00000434046 PI4KAP2A4QPH2 592 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 URI1O94763 535 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 HSPA2P54652 639 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 SYT10Q6XYQ8 523 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 GOLGA6L1Q8N7Z2 621 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 PI4KAP1Q8N8J0 262 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 SDF4Q9BRK5 362 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 CWC15Q9P013 229 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 PIK3R4Q99570 1358 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 KRBA2Q6ZNG9 492 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 DDX19AQ9NUU7 478 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 RSPH14Q9UHP6 348 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 KINO60870 393 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 TTC6Q86TZ1 520 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 DDX11Q96FC9 970 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 SCAND2PQ9GZW5 306 aaPredicted RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 SNX14Q9Y5W7 946 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 RGS12O14924 1447 aa8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 CPSF1Q10570 1443 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 SETD1BQ9UPS6 1966 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-203ENST00000434046 ARHGEF10O15013 1369 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 DLC1Q96QB1 1528 aa8.67□□□□□ -1.02
SYNPO2-203ENST00000434046 USP27XA6NNY8 438 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms