RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 LARGE2Q8N3Y3 721 aa13.84□□□□□ -0.19
HOXD3-203ENST00000432796 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
HOXD3-203ENST00000432796 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.2
HOXD3-203ENST00000432796 FXR1P51114 621 aaKnown RBP eCLIP13.83□□□□□ -0.2
HOXD3-203ENST00000432796 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.2
HOXD3-203ENST00000432796 CLEC4GQ6UXB4 293 aa13.83□□□□□ -0.2
HOXD3-203ENST00000432796 CDC37L1Q7L3B6 337 aa13.83□□□□□ -0.2
HOXD3-203ENST00000432796 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
HOXD3-203ENST00000432796 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.2
HOXD3-203ENST00000432796 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.2
HOXD3-203ENST00000432796 KIF23Q02241 960 aaPredicted RBP13.82□□□□□ -0.2
HOXD3-203ENST00000432796 GRIPAP1Q4V328 841 aa13.82□□□□□ -0.2
HOXD3-203ENST00000432796 RGMBQ6NW40 437 aa13.82□□□□□ -0.2
HOXD3-203ENST00000432796 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
HOXD3-203ENST00000432796 ZNF496Q96IT1 587 aaPredicted RBP13.82□□□□□ -0.2
HOXD3-203ENST00000432796 MKI67P46013 3256 aaKnown RBP13.82□□□□□ -0.2
HOXD3-203ENST00000432796 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
HOXD3-203ENST00000432796 A1BGP04217 495 aa13.81□□□□□ -0.2
HOXD3-203ENST00000432796 NIM1KQ8IY84 436 aa13.81□□□□□ -0.2
HOXD3-203ENST00000432796 CCDC102AQ96A19 550 aa13.81□□□□□ -0.2
HOXD3-203ENST00000432796 ZNF652Q9Y2D9 606 aa13.81□□□□□ -0.2
HOXD3-203ENST00000432796 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
HOXD3-203ENST00000432796 CDHR2Q9BYE9 1310 aa13.8□□□□□ -0.2
HOXD3-203ENST00000432796 CRY2Q49AN0 593 aa13.79□□□□□ -0.2
HOXD3-203ENST00000432796 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
HOXD3-203ENST00000432796 NPC1L1Q9UHC9 1359 aa13.79□□□□□ -0.2
HOXD3-203ENST00000432796 IL13P35225 146 aa13.78□□□□□ -0.2
HOXD3-203ENST00000432796 GMPSP49915 693 aaPredicted RBP13.78□□□□□ -0.2
HOXD3-203ENST00000432796 HIRAP54198 1017 aaPredicted RBP13.78□□□□□ -0.2
HOXD3-203ENST00000432796 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
HOXD3-203ENST00000432796 RGL2O15211 777 aa13.77□□□□□ -0.21
HOXD3-203ENST00000432796 PPIP5K2O43314 1243 aa13.77□□□□□ -0.21
HOXD3-203ENST00000432796 ZNF157P51786 506 aaPredicted RBP13.77□□□□□ -0.21
HOXD3-203ENST00000432796 CXCL9Q07325 125 aa13.77□□□□□ -0.21
HOXD3-203ENST00000432796 TRPM4Q8TD43 1214 aa13.77□□□□□ -0.21
HOXD3-203ENST00000432796 CSRNP1Q96S65 589 aa13.77□□□□□ -0.21
HOXD3-203ENST00000432796 GBA2Q9HCG7 927 aaPredicted RBP13.77□□□□□ -0.21
HOXD3-203ENST00000432796 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
HOXD3-203ENST00000432796 USP48Q86UV5 1035 aa13.76□□□□□ -0.21
HOXD3-203ENST00000432796 FMNL2Q96PY5 1086 aa13.76□□□□□ -0.21
HOXD3-203ENST00000432796 VPS33BQ9H267 617 aa13.76□□□□□ -0.21
HOXD3-203ENST00000432796 HDAC9Q9UKV0 1011 aa13.76□□□□□ -0.21
HOXD3-203ENST00000432796 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
HOXD3-203ENST00000432796 SZT2Q5T011 3432 aa13.75□□□□□ -0.21
HOXD3-203ENST00000432796 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
HOXD3-203ENST00000432796 DLL1O00548 723 aa13.75□□□□□ -0.21
HOXD3-203ENST00000432796 SLC10A3P09131 477 aa13.75□□□□□ -0.21
HOXD3-203ENST00000432796 GTF2E1P29083 439 aaPredicted RBP13.75□□□□□ -0.21
HOXD3-203ENST00000432796 AOC3Q16853 763 aa13.75□□□□□ -0.21
HOXD3-203ENST00000432796 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
HOXD3-203ENST00000432796 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
HOXD3-203ENST00000432796 C2orf69Q8N8R5 385 aa13.75□□□□□ -0.21
HOXD3-203ENST00000432796 HOXA10P31260 410 aaPredicted RBP13.74□□□□□ -0.21
HOXD3-203ENST00000432796 TEFQ10587 303 aa13.74□□□□□ -0.21
HOXD3-203ENST00000432796 FBXO46Q6PJ61 603 aaPredicted RBP13.74□□□□□ -0.21
HOXD3-203ENST00000432796 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
HOXD3-203ENST00000432796 ABCC12Q96J65 1359 aa13.73□□□□□ -0.21
HOXD3-203ENST00000432796 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
HOXD3-203ENST00000432796 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
HOXD3-203ENST00000432796 DLK2Q6UY11 383 aa13.73□□□□□ -0.21
HOXD3-203ENST00000432796 ZNF296Q8WUU4 475 aaPredicted RBP13.73□□□□□ -0.21
HOXD3-203ENST00000432796 RPGRQ92834 1020 aaKnown RBP13.73□□□□□ -0.21
HOXD3-203ENST00000432796 CFAP53Q96M91 514 aa13.73□□□□□ -0.21
HOXD3-203ENST00000432796 RIC1Q4ADV7 1423 aa13.73□□□□□ -0.21
HOXD3-203ENST00000432796 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
HOXD3-203ENST00000432796 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
HOXD3-203ENST00000432796 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
HOXD3-203ENST00000432796 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
HOXD3-203ENST00000432796 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
HOXD3-203ENST00000432796 H7C1D1 291 aa13.71□□□□□ -0.21
HOXD3-203ENST00000432796 HMOX1P09601 288 aa13.71□□□□□ -0.21
HOXD3-203ENST00000432796 TNIP1Q15025 636 aa13.71□□□□□ -0.21
HOXD3-203ENST00000432796 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
HOXD3-203ENST00000432796 NYXQ9GZU5 481 aa13.71□□□□□ -0.21
HOXD3-203ENST00000432796 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.21
HOXD3-203ENST00000432796 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
HOXD3-203ENST00000432796 MICALL2Q8IY33 904 aa13.7□□□□□ -0.22
HOXD3-203ENST00000432796 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
HOXD3-203ENST00000432796 RBM17Q96I25 401 aaKnown RBP13.7□□□□□ -0.22
HOXD3-203ENST00000432796 A0A0C4DFX4 3053 aa13.7□□□□□ -0.22
HOXD3-203ENST00000432796 HTTP42858 3142 aa13.69□□□□□ -0.22
HOXD3-203ENST00000432796 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
HOXD3-203ENST00000432796 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
HOXD3-203ENST00000432796 RAD17O75943 681 aa13.69□□□□□ -0.22
HOXD3-203ENST00000432796 NOM1Q5C9Z4 860 aaKnown RBP13.69□□□□□ -0.22
HOXD3-203ENST00000432796 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
HOXD3-203ENST00000432796 RASAL3Q86YV0 1011 aa13.69□□□□□ -0.22
HOXD3-203ENST00000432796 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
HOXD3-203ENST00000432796 RTFDC1Q9BY42 306 aaPredicted RBP13.69□□□□□ -0.22
HOXD3-203ENST00000432796 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
HOXD3-203ENST00000432796 BRCA2P51587 3418 aa13.68□□□□□ -0.22
HOXD3-203ENST00000432796 ADM5C9JUS6 153 aa13.68□□□□□ -0.22
HOXD3-203ENST00000432796 U2SURPO15042 1029 aaKnown RBP13.68□□□□□ -0.22
HOXD3-203ENST00000432796 HLFQ16534 295 aa13.68□□□□□ -0.22
HOXD3-203ENST00000432796 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
HOXD3-203ENST00000432796 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
HOXD3-203ENST00000432796 ATP6V0A2Q9Y487 856 aa13.68□□□□□ -0.22
HOXD3-203ENST00000432796 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
HOXD3-203ENST00000432796 GPR25O00155 361 aa13.67□□□□□ -0.22
HOXD3-203ENST00000432796 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms