RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 YBX3P16989 372 aaKnown RBP eCLIP5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 TXLNAP40222 546 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 TEAD4Q15561 434 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 USP17L2Q6R6M4 530 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 USP17L1Q7RTZ2 530 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 TRIM50Q86XT4 487 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 CCDC97Q96F63 343 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 TFIP11Q9UBB9 837 aaKnown RBP5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 SERPINA10Q9UK55 444 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 NOD1Q9Y239 953 aa5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 MAFBQ9Y5Q3 323 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P9-201ENST00000429856 NOS2P35228 1153 aa5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 ATP1A2P50993 1020 aa5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 SLC51AQ86UW1 340 aa5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 SCHIP1Q9P0W5 487 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 ANKIB1Q9P2G1 1089 aa5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 ZNF232Q9UNY5 417 aa5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 USP3Q9Y6I4 520 aa5.65□□□□□ -1.5
HMGB1P9-201ENST00000429856 EML1O00423 815 aa5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 SHISA2Q6UWI4 295 aa5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 DEPDC4Q8N2C3 294 aa5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 CEP63Q96MT8 703 aa5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 JPH1Q9HDC5 661 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 PCMTD2Q9NV79 361 aa5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 KCNH4Q9UQ05 1017 aa5.64□□□□□ -1.51
HMGB1P9-201ENST00000429856 ARID3CA6NKF2 412 aa5.63□□□□□ -1.51
HMGB1P9-201ENST00000429856 GTF2IP78347 998 aa5.63□□□□□ -1.51
HMGB1P9-201ENST00000429856 SSBP4Q9BWG4 385 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P9-201ENST00000429856 SERTM1A2A2V5 107 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 LMOD1P29536 600 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 KCNQ4P56696 695 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 TBC1D8BQ0IIM8 1120 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 RAB44Q7Z6P3 723 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 RHPN1Q8TCX5 695 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 ZDHHC1Q8WTX9 485 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 C7orf43Q8WVR3 580 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 UBE2OQ9C0C9 1292 aaKnown RBP5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 IGFLR1Q9H665 355 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 EFCC1Q9HA90 598 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 BRD7Q9NPI1 651 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 MKRN1Q9UHC7 482 aaKnown RBP5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 PCDHGA11Q9Y5H2 935 aa5.62□□□□□ -1.51
HMGB1P9-201ENST00000429856 SFI1A8K8P3 1242 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 PSME1Q06323 249 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 CFAP70Q5T0N1 1121 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 C1orf53Q5VUE5 145 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 DMRTC2Q8IXT2 367 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 FMR1NBQ8N0W7 255 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 LARGE2Q8N3Y3 721 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 NUDT8Q8WV74 236 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 WFDC12Q8WWY7 111 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 BHMTQ93088 406 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 FMNL2Q96PY5 1086 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 VRTNQ9H8Y1 702 aa5.61□□□□□ -1.51
HMGB1P9-201ENST00000429856 RGS9O75916 674 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 IRAK1P51617 712 aa5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 AFF1P51825 1210 aaKnown RBP5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 LARP1Q6PKG0 1096 aaKnown RBP5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 CCDC82Q8N4S0 544 aa5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 OGFOD1Q8N543 542 aa5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 DTWD1Q8N5C7 304 aa5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 SLC6A14Q9UN76 642 aa5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 CHMP3Q9Y3E7 222 aa5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 RBM19Q9Y4C8 960 aaKnown RBP5.6□□□□□ -1.51
HMGB1P9-201ENST00000429856 FAM196BA6NMK8 535 aa5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 RASA1P20936 1047 aa5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 IREB2P48200 963 aaKnown RBP5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 KANK4Q5T7N3 995 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 PSAPL1Q6NUJ1 521 aa5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 SLC9A9Q8IVB4 645 aa5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 SIX5Q8N196 739 aa5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 ZNF358Q9NW07 568 aa5.59□□□□□ -1.51
HMGB1P9-201ENST00000429856 RFX1P22670 979 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 CLDN10P78369 228 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 PCSK7Q16549 785 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 CCDC102BQ68D86 513 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 IGF2-ASQ6U949 168 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 FBXO11Q86XK2 927 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 TPCN2Q8NHX9 752 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 PBXIP1Q96AQ6 731 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 C1orf115Q9H7X2 142 aa5.58□□□□□ -1.52
HMGB1P9-201ENST00000429856 M0R2N6 131 aa5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 ZBTB7BO15156 539 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 SSTR4P31391 388 aa5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 TBCELQ5QJ74 424 aa5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 PRR23CQ6ZRP0 262 aa5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 TNS4Q8IZW8 715 aa5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 HCN4Q9Y3Q4 1203 aa5.57□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L15C9J2P7 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L10C9JJH3 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L13C9JLJ4 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L12C9JPN9 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L11C9JVI0 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L21D6R901 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L18D6R9N7 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L22D6RA61 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L17D6RBQ6 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L19D6RCP7 530 aa5.56□□□□□ -1.52
HMGB1P9-201ENST00000429856 USP17L20D6RJB6 530 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms