RNA–Protein interactions for RNA: ENST00000429017.2

HOXD8-202, Transcript of homeobox D8, humanhuman

TSL 2 BASIC

Gene HOXD8, Length 1,608 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-202ENST00000429017 COG3Q96JB2 828 aa9.23□□□□□ -0.93
HOXD8-202ENST00000429017 NBPF4Q96M43 638 aa9.23□□□□□ -0.93
HOXD8-202ENST00000429017 AMPHP49418 695 aa9.23□□□□□ -0.93
HOXD8-202ENST00000429017 NLGN2Q8NFZ4 835 aa9.23□□□□□ -0.93
HOXD8-202ENST00000429017 ZCRB1Q8TBF4 217 aaKnown RBP9.23□□□□□ -0.93
HOXD8-202ENST00000429017 PXYLP1Q8TE99 480 aa9.23□□□□□ -0.93
HOXD8-202ENST00000429017 FYB1O15117 783 aa9.22□□□□□ -0.93
HOXD8-202ENST00000429017 SLC16A10Q8TF71 515 aa9.22□□□□□ -0.93
HOXD8-202ENST00000429017 GGNBP2Q9H3C7 697 aa9.22□□□□□ -0.93
HOXD8-202ENST00000429017 GPR162Q16538 588 aa9.21□□□□□ -0.93
HOXD8-202ENST00000429017 COL23A1Q86Y22 540 aaPredicted RBP9.21□□□□□ -0.93
HOXD8-202ENST00000429017 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.93
HOXD8-202ENST00000429017 FCF1Q9Y324 198 aaKnown RBP9.21□□□□□ -0.93
HOXD8-202ENST00000429017 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
HOXD8-202ENST00000429017 CCNL1Q9UK58 526 aaPredicted RBP9.2□□□□□ -0.94
HOXD8-202ENST00000429017 RTL1A6NKG5 1358 aa9.2□□□□□ -0.94
HOXD8-202ENST00000429017 YBX3P16989 372 aaKnown RBP eCLIP9.2□□□□□ -0.94
HOXD8-202ENST00000429017 POLD1P28340 1107 aa9.2□□□□□ -0.94
HOXD8-202ENST00000429017 C1QTNF8P60827 252 aa9.2□□□□□ -0.94
HOXD8-202ENST00000429017 INSM1Q01101 510 aaPredicted RBP9.2□□□□□ -0.94
HOXD8-202ENST00000429017 HSP90AB2PQ58FF8 381 aa9.2□□□□□ -0.94
HOXD8-202ENST00000429017 CYP4X1Q8N118 509 aa9.2□□□□□ -0.94
HOXD8-202ENST00000429017 FAM160A2Q8N612 972 aaPredicted RBP9.2□□□□□ -0.94
HOXD8-202ENST00000429017 MORN1Q5T089 497 aa9.19□□□□□ -0.94
HOXD8-202ENST00000429017 MSL1Q68DK7 614 aa9.19□□□□□ -0.94
HOXD8-202ENST00000429017 AMIGO3Q86WK7 504 aa9.19□□□□□ -0.94
HOXD8-202ENST00000429017 TOGARAM1Q9Y4F4 1720 aa9.19□□□□□ -0.94
HOXD8-202ENST00000429017 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
HOXD8-202ENST00000429017 SMIM5Q71RC9 77 aa9.18□□□□□ -0.94
HOXD8-202ENST00000429017 CARD14Q9BXL6 1004 aa9.18□□□□□ -0.94
HOXD8-202ENST00000429017 INSRP06213 1382 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 USP47Q96K76 1375 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 C5P01031 1676 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 SENP3-EIF4A1A0A087X0R7 540 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 CYP27B1O15528 508 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 KIF20BQ96Q89 1820 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 TAF1LQ8IZX4 1826 aa9.17□□□□□ -0.94
HOXD8-202ENST00000429017 TATP17735 454 aaPredicted RBP9.16□□□□□ -0.94
HOXD8-202ENST00000429017 RAPGEF4Q8WZA2 1011 aa9.16□□□□□ -0.94
HOXD8-202ENST00000429017 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
HOXD8-202ENST00000429017 EMILIN1Q9Y6C2 1016 aa9.16□□□□□ -0.94
HOXD8-202ENST00000429017 PALLDQ8WX93 1383 aa9.16□□□□□ -0.94
HOXD8-202ENST00000429017 CGNL1Q0VF96 1302 aa9.16□□□□□ -0.94
HOXD8-202ENST00000429017 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
HOXD8-202ENST00000429017 SMPD1P17405 629 aa9.16□□□□□ -0.94
HOXD8-202ENST00000429017 TMF1P82094 1093 aa9.16□□□□□ -0.94
HOXD8-202ENST00000429017 NCAPD2Q15021 1401 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 ITGB4P16144 1822 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 FLT4P35916 1363 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 PCDH11XQ9BZA7 1347 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 PCDH11YQ9BZA8 1340 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
HOXD8-202ENST00000429017 MPRIPQ6WCQ1 1025 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 METTL3Q86U44 580 aaKnown RBP9.15□□□□□ -0.94
HOXD8-202ENST00000429017 KCNV2Q8TDN2 545 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
HOXD8-202ENST00000429017 SMG6Q86US8 1419 aaKnown RBP9.15□□□□□ -0.95
HOXD8-202ENST00000429017 PKD1L3Q7Z443 1732 aa9.15□□□□□ -0.95
HOXD8-202ENST00000429017 LOC100996750A0A140TA64 210 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 SLC24A1O60721 1099 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 OATP04181 439 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 PIGBQ92521 554 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 TRIM47Q96LD4 638 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 KRTAP4-6Q9BYQ5 205 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 PRDM9Q9NQV7 894 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
HOXD8-202ENST00000429017 C4BP0C0L5 1744 aa9.14□□□□□ -0.95
HOXD8-202ENST00000429017 MAP2P11137 1827 aaKnown RBP9.14□□□□□ -0.95
HOXD8-202ENST00000429017 GOLGB1Q14789 3259 aaKnown RBP9.14□□□□□ -0.95
HOXD8-202ENST00000429017 NSD3Q9BZ95 1437 aa9.13□□□□□ -0.95
HOXD8-202ENST00000429017 GIGYF1O75420 1035 aaPredicted RBP9.13□□□□□ -0.95
HOXD8-202ENST00000429017 FCHSD2O94868 740 aa9.13□□□□□ -0.95
HOXD8-202ENST00000429017 PAXIP1Q6ZW49 1069 aaPredicted RBP9.13□□□□□ -0.95
HOXD8-202ENST00000429017 KIF24Q5T7B8 1368 aa9.13□□□□□ -0.95
HOXD8-202ENST00000429017 UBR3Q6ZT12 1888 aa9.13□□□□□ -0.95
HOXD8-202ENST00000429017 WNT7AO00755 349 aa9.13□□□□□ -0.95
HOXD8-202ENST00000429017 ANKRD26Q9UPS8 1709 aa9.12□□□□□ -0.95
HOXD8-202ENST00000429017 GRIN3BO60391 1043 aa9.12□□□□□ -0.95
HOXD8-202ENST00000429017 FUT2Q10981 343 aa9.12□□□□□ -0.95
HOXD8-202ENST00000429017 LINC00116Q8NCU8 138 aa9.12□□□□□ -0.95
HOXD8-202ENST00000429017 SLC27A5Q9Y2P5 690 aa9.12□□□□□ -0.95
HOXD8-202ENST00000429017 CD2APQ9Y5K6 639 aa9.12□□□□□ -0.95
HOXD8-202ENST00000429017 ATP10DQ9P241 1426 aa9.11□□□□□ -0.95
HOXD8-202ENST00000429017 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
HOXD8-202ENST00000429017 ITPK1Q13572 414 aa9.11□□□□□ -0.95
HOXD8-202ENST00000429017 BRICD5Q6PL45 260 aa9.11□□□□□ -0.95
HOXD8-202ENST00000429017 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
HOXD8-202ENST00000429017 WWC3Q9ULE0 1092 aa9.11□□□□□ -0.95
HOXD8-202ENST00000429017 WASHC2AQ641Q2 1341 aa9.11□□□□□ -0.95
HOXD8-202ENST00000429017 ADCY9O60503 1353 aa9.1□□□□□ -0.95
HOXD8-202ENST00000429017 PPM1GO15355 546 aaPredicted RBP9.1□□□□□ -0.95
HOXD8-202ENST00000429017 MSS51Q4VC12 460 aa9.1□□□□□ -0.95
HOXD8-202ENST00000429017 FLAD1Q8NFF5 587 aa9.1□□□□□ -0.95
HOXD8-202ENST00000429017 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
HOXD8-202ENST00000429017 SMARCC1Q92922 1105 aaPredicted RBP9.1□□□□□ -0.95
HOXD8-202ENST00000429017 AK7Q96M32 723 aa9.1□□□□□ -0.95
HOXD8-202ENST00000429017 POLKQ9UBT6 870 aa9.1□□□□□ -0.95
HOXD8-202ENST00000429017 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
HOXD8-202ENST00000429017 LOC102724428A0A0B4J2F2 783 aa9.09□□□□□ -0.95
HOXD8-202ENST00000429017 TTC24A2A3L6 582 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms