RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 IER5Q5VY09 327 aa9.97□□□□□ -0.81
HMGB3P5-201ENST00000428894 LINC00114Q6XXX2 140 aa9.97□□□□□ -0.81
HMGB3P5-201ENST00000428894 RAB44Q7Z6P3 723 aaPredicted RBP9.97□□□□□ -0.81
HMGB3P5-201ENST00000428894 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
HMGB3P5-201ENST00000428894 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.97□□□□□ -0.81
HMGB3P5-201ENST00000428894 PRMT3O60678 531 aa9.96□□□□□ -0.82
HMGB3P5-201ENST00000428894 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.82
HMGB3P5-201ENST00000428894 NEUROD1Q13562 356 aa9.96□□□□□ -0.82
HMGB3P5-201ENST00000428894 DGKZQ13574 1117 aa9.96□□□□□ -0.82
HMGB3P5-201ENST00000428894 PBXIP1Q96AQ6 731 aa9.96□□□□□ -0.82
HMGB3P5-201ENST00000428894 ELOA3CA0A087WX78 387 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 ELOA3DA6NLF2 546 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 ALAS2P22557 587 aa9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 FKBP5Q13451 457 aaPredicted RBP9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 ELOA3BQ3SY89 546 aa9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 ELOA3Q8NG57 546 aa9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 DCAF5Q96JK2 942 aa9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 DMGDHQ9UI17 866 aaKnown RBP9.95□□□□□ -0.82
HMGB3P5-201ENST00000428894 DGKGP49619 791 aa9.94□□□□□ -0.82
HMGB3P5-201ENST00000428894 C14orf37Q86TY3 774 aa9.94□□□□□ -0.82
HMGB3P5-201ENST00000428894 BHMTQ93088 406 aa9.94□□□□□ -0.82
HMGB3P5-201ENST00000428894 MYO19Q96H55 970 aa9.94□□□□□ -0.82
HMGB3P5-201ENST00000428894 ADARB2-AS1A8MUL3 147 aa9.93□□□□□ -0.82
HMGB3P5-201ENST00000428894 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
HMGB3P5-201ENST00000428894 TMEM164Q5U3C3 297 aa9.93□□□□□ -0.82
HMGB3P5-201ENST00000428894 PIK3R2O00459 728 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 GNB5O14775 395 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 IDH3AP50213 366 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 OCLNQ16625 522 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 TNFRSF25Q93038 417 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 MDFIQ99750 246 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 SUV39H2Q9H5I1 410 aa9.92□□□□□ -0.82
HMGB3P5-201ENST00000428894 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
HMGB3P5-201ENST00000428894 CCDC82Q8N4S0 544 aa9.91□□□□□ -0.82
HMGB3P5-201ENST00000428894 LRFN2Q9ULH4 789 aa9.91□□□□□ -0.82
HMGB3P5-201ENST00000428894 MICAL2O94851 1124 aa9.9□□□□□ -0.82
HMGB3P5-201ENST00000428894 EPB42P16452 691 aa9.9□□□□□ -0.82
HMGB3P5-201ENST00000428894 COL8A1P27658 744 aa9.9□□□□□ -0.82
HMGB3P5-201ENST00000428894 INPP5BP32019 993 aa9.9□□□□□ -0.82
HMGB3P5-201ENST00000428894 IFT43Q96FT9 208 aa9.9□□□□□ -0.82
HMGB3P5-201ENST00000428894 GSX2Q9BZM3 304 aa9.9□□□□□ -0.82
HMGB3P5-201ENST00000428894 ADH7P40394 386 aa9.89□□□□□ -0.83
HMGB3P5-201ENST00000428894 CCINQ13939 588 aa9.89□□□□□ -0.83
HMGB3P5-201ENST00000428894 COX20Q5RI15 118 aa9.89□□□□□ -0.83
HMGB3P5-201ENST00000428894 PNMA5Q96PV4 448 aa9.89□□□□□ -0.83
HMGB3P5-201ENST00000428894 IGFLR1Q9H665 355 aa9.89□□□□□ -0.83
HMGB3P5-201ENST00000428894 CXXC1Q9P0U4 656 aaPredicted RBP9.89□□□□□ -0.83
HMGB3P5-201ENST00000428894 GRNP28799 593 aaKnown RBP9.88□□□□□ -0.83
HMGB3P5-201ENST00000428894 ARSDP51689 593 aa9.88□□□□□ -0.83
HMGB3P5-201ENST00000428894 TBC1D8BQ0IIM8 1120 aa9.88□□□□□ -0.83
HMGB3P5-201ENST00000428894 MKNK1Q9BUB5 465 aa9.88□□□□□ -0.83
HMGB3P5-201ENST00000428894 EFCC1Q9HA90 598 aa9.88□□□□□ -0.83
HMGB3P5-201ENST00000428894 STARD13Q9Y3M8 1113 aa9.88□□□□□ -0.83
HMGB3P5-201ENST00000428894 PLA2G4EQ3MJ16 856 aa9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 ALYREFQ86V81 257 aaKnown RBP9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 CLP1Q92989 425 aaKnown RBP9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 UBE2OQ9C0C9 1292 aaKnown RBP9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 SAP130Q9H0E3 1048 aa9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 C1orf115Q9H7X2 142 aa9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.87□□□□□ -0.83
HMGB3P5-201ENST00000428894 KRBA1A5PL33 1030 aa9.86□□□□□ -0.83
HMGB3P5-201ENST00000428894 IGHA1P01876 353 aa9.86□□□□□ -0.83
HMGB3P5-201ENST00000428894 NOP53Q9NZM5 478 aaKnown RBP9.86□□□□□ -0.83
HMGB3P5-201ENST00000428894 M0R082 166 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 OPLAHO14841 1288 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 NFKB1P19838 968 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 NAA30Q147X3 362 aaPredicted RBP9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 C16orf46Q6P387 395 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 CAPN12Q6ZSI9 719 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 TREML1Q86YW5 311 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 ZNF417Q8TAU3 575 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 COL26A1Q96A83 441 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 TRIM11Q96F44 468 aa9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 ZNF587Q96SQ5 575 aaPredicted RBP9.85□□□□□ -0.83
HMGB3P5-201ENST00000428894 ALBP02768 609 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 ITGB2P05107 769 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 KRT25Q7Z3Z0 450 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 MICALL1Q8N3F8 863 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 PLVAPQ9BX97 442 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 SLAIN2Q9P270 581 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 USP20Q9Y2K6 914 aa9.84□□□□□ -0.83
HMGB3P5-201ENST00000428894 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
HMGB3P5-201ENST00000428894 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
HMGB3P5-201ENST00000428894 RTCBQ9Y3I0 505 aaKnown RBP9.83□□□□□ -0.84
HMGB3P5-201ENST00000428894 MSTNO14793 375 aa9.82□□□□□ -0.84
HMGB3P5-201ENST00000428894 RGL4Q8IZJ4 473 aa9.82□□□□□ -0.84
HMGB3P5-201ENST00000428894 CMTR1Q8N1G2 835 aaKnown RBP9.82□□□□□ -0.84
HMGB3P5-201ENST00000428894 C11orf16Q9NQ32 467 aa9.82□□□□□ -0.84
HMGB3P5-201ENST00000428894 DNAJB12Q9NXW2 375 aaKnown RBP9.82□□□□□ -0.84
HMGB3P5-201ENST00000428894 SLC6A14Q9UN76 642 aa9.82□□□□□ -0.84
HMGB3P5-201ENST00000428894 SASH3O75995 380 aa9.81□□□□□ -0.84
HMGB3P5-201ENST00000428894 ATP2B4P23634 1241 aa9.81□□□□□ -0.84
HMGB3P5-201ENST00000428894 TARSP26639 723 aaKnown RBP9.81□□□□□ -0.84
HMGB3P5-201ENST00000428894 C20orf204Q6ZNR8 217 aa9.81□□□□□ -0.84
HMGB3P5-201ENST00000428894 ETFBKMTQ8IXQ9 262 aa9.81□□□□□ -0.84
HMGB3P5-201ENST00000428894 ZFATQ9P243 1243 aa9.81□□□□□ -0.84
HMGB3P5-201ENST00000428894 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P5-201ENST00000428894 COL9A3Q14050 684 aaPredicted RBP9.8□□□□□ -0.84
HMGB3P5-201ENST00000428894 SPOCK3Q9BQ16 436 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms