RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 RNF186Q9NXI6 227 aa16.26■□□□□ 0.19
DDX39B-208ENST00000428098 KIF23Q02241 960 aaPredicted RBP16.25■□□□□ 0.19
DDX39B-208ENST00000428098 HABP4Q5JVS0 413 aaKnown RBP16.25■□□□□ 0.19
DDX39B-208ENST00000428098 NPM2Q86SE8 214 aaKnown RBP16.25■□□□□ 0.19
DDX39B-208ENST00000428098 MORC1Q86VD1 984 aa16.25■□□□□ 0.19
DDX39B-208ENST00000428098 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
DDX39B-208ENST00000428098 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.195e-52■■□□□ 13.4
DDX39B-208ENST00000428098 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 HUNKP57058 714 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 CXCL9Q07325 125 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 CC2D2BQ6DHV5 1058 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 PANK3Q9H999 370 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 SAGE1Q9NXZ1 904 aa16.24■□□□□ 0.19
DDX39B-208ENST00000428098 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
DDX39B-208ENST00000428098 CRY2Q49AN0 593 aa16.23■□□□□ 0.19
DDX39B-208ENST00000428098 USP48Q86UV5 1035 aa16.23■□□□□ 0.19
DDX39B-208ENST00000428098 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
DDX39B-208ENST00000428098 HPS5Q9UPZ3 1129 aa16.23■□□□□ 0.19
DDX39B-208ENST00000428098 TCERG1O14776 1098 aaKnown RBP16.22■□□□□ 0.19
DDX39B-208ENST00000428098 HLFQ16534 295 aa16.22■□□□□ 0.19
DDX39B-208ENST00000428098 CDC37L1Q7L3B6 337 aa16.22■□□□□ 0.19
DDX39B-208ENST00000428098 CTU1Q7Z7A3 348 aaKnown RBP16.22■□□□□ 0.19
DDX39B-208ENST00000428098 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
DDX39B-208ENST00000428098 RGMBQ6NW40 437 aa16.21■□□□□ 0.19
DDX39B-208ENST00000428098 NIM1KQ8IY84 436 aa16.21■□□□□ 0.19
DDX39B-208ENST00000428098 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.19
DDX39B-208ENST00000428098 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
DDX39B-208ENST00000428098 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
DDX39B-208ENST00000428098 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.19
DDX39B-208ENST00000428098 NBPF26B4DH59 902 aa16.2■□□□□ 0.18
DDX39B-208ENST00000428098 HOXA10P31260 410 aaPredicted RBP16.2■□□□□ 0.18
DDX39B-208ENST00000428098 TEFQ10587 303 aa16.2■□□□□ 0.18
DDX39B-208ENST00000428098 AOC3Q16853 763 aa16.2■□□□□ 0.18
DDX39B-208ENST00000428098 NBPF10Q6P3W6 841 aaKnown RBP16.2■□□□□ 0.18
DDX39B-208ENST00000428098 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
DDX39B-208ENST00000428098 NBPF15Q8N660 670 aa16.2■□□□□ 0.18
DDX39B-208ENST00000428098 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
DDX39B-208ENST00000428098 PPIP5K2O43314 1243 aa16.19■□□□□ 0.18
DDX39B-208ENST00000428098 GCC1Q96CN9 775 aa16.19■□□□□ 0.18
DDX39B-208ENST00000428098 ZNRF3Q9ULT6 936 aa16.19■□□□□ 0.18
DDX39B-208ENST00000428098 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
DDX39B-208ENST00000428098 GTF2E1P29083 439 aaPredicted RBP16.18■□□□□ 0.18
DDX39B-208ENST00000428098 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
DDX39B-208ENST00000428098 ZNF157P51786 506 aaPredicted RBP16.16■□□□□ 0.18
DDX39B-208ENST00000428098 GRIPAP1Q4V328 841 aa16.16■□□□□ 0.18
DDX39B-208ENST00000428098 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
DDX39B-208ENST00000428098 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
DDX39B-208ENST00000428098 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
DDX39B-208ENST00000428098 RGL2O15211 777 aa16.15■□□□□ 0.18
DDX39B-208ENST00000428098 RAD17O75943 681 aa16.15■□□□□ 0.18
DDX39B-208ENST00000428098 FXR1P51114 621 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX39B-208ENST00000428098 CRAMP1Q96RY5 1269 aa16.15■□□□□ 0.18
DDX39B-208ENST00000428098 GBA2Q9HCG7 927 aaPredicted RBP16.15■□□□□ 0.18
DDX39B-208ENST00000428098 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
DDX39B-208ENST00000428098 PPEF1O14829 653 aaPredicted RBP16.14■□□□□ 0.17
DDX39B-208ENST00000428098 RPGRQ92834 1020 aaKnown RBP16.14■□□□□ 0.17
DDX39B-208ENST00000428098 BCL2L13Q9BXK5 485 aa16.14■□□□□ 0.17
DDX39B-208ENST00000428098 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
DDX39B-208ENST00000428098 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
DDX39B-208ENST00000428098 EGFRP00533 1210 aa16.13■□□□□ 0.17
DDX39B-208ENST00000428098 SAMD7Q7Z3H4 446 aa16.13■□□□□ 0.17
DDX39B-208ENST00000428098 C2orf69Q8N8R5 385 aa16.13■□□□□ 0.17
DDX39B-208ENST00000428098 VPS33BQ9H267 617 aa16.13■□□□□ 0.17
DDX39B-208ENST00000428098 MKI67P46013 3256 aaKnown RBP16.13■□□□□ 0.17
DDX39B-208ENST00000428098 SLC10A3P09131 477 aa16.12■□□□□ 0.17
DDX39B-208ENST00000428098 SNRPA1P09661 255 aaKnown RBP16.12■□□□□ 0.17
DDX39B-208ENST00000428098 PKN2Q16513 984 aaKnown RBP16.12■□□□□ 0.17
DDX39B-208ENST00000428098 RBM17Q96I25 401 aaKnown RBP16.12■□□□□ 0.17
DDX39B-208ENST00000428098 RTFDC1Q9BY42 306 aaPredicted RBP16.12■□□□□ 0.17
DDX39B-208ENST00000428098 POLR2AP24928 1970 aaKnown RBP16.12■□□□□ 0.17
DDX39B-208ENST00000428098 AKAP11Q9UKA4 1901 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 YDJCA8MPS7 323 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 ADM5C9JUS6 153 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 KRT26Q7Z3Y9 468 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
DDX39B-208ENST00000428098 ZBTB12Q9Y330 459 aaPredicted RBP16.11■□□□□ 0.17
DDX39B-208ENST00000428098 ATP6V0A2Q9Y487 856 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 CDHR2Q9BYE9 1310 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
DDX39B-208ENST00000428098 H7C1D1 291 aa16.1■□□□□ 0.17
DDX39B-208ENST00000428098 DIAPH1O60610 1272 aaKnown RBP16.1■□□□□ 0.17
DDX39B-208ENST00000428098 TBC1D8O95759 1140 aa16.1■□□□□ 0.17
DDX39B-208ENST00000428098 TNIP1Q15025 636 aa16.1■□□□□ 0.17
DDX39B-208ENST00000428098 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
DDX39B-208ENST00000428098 NYXQ9GZU5 481 aa16.1■□□□□ 0.17
DDX39B-208ENST00000428098 RIC1Q4ADV7 1423 aa16.1■□□□□ 0.17
DDX39B-208ENST00000428098 TBC1D10BQ4KMP7 808 aaPredicted RBP16.09■□□□□ 0.17
DDX39B-208ENST00000428098 HDAC9Q9UKV0 1011 aa16.09■□□□□ 0.17
DDX39B-208ENST00000428098 GPTP24298 496 aa16.08■□□□□ 0.16
DDX39B-208ENST00000428098 KIAA2012Q0VF49 1180 aa16.08■□□□□ 0.16
DDX39B-208ENST00000428098 NGEFQ8N5V2 710 aa16.08■□□□□ 0.16
DDX39B-208ENST00000428098 UBN2Q6ZU65 1347 aa16.08■□□□□ 0.16
DDX39B-208ENST00000428098 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
DDX39B-208ENST00000428098 RASAL3Q86YV0 1011 aa16.07■□□□□ 0.16
DDX39B-208ENST00000428098 GAS2L2Q8NHY3 880 aa16.07■□□□□ 0.16
DDX39B-208ENST00000428098 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
DDX39B-208ENST00000428098 RBM26Q5T8P6 1007 aaKnown RBP16.06■□□□□ 0.16
DDX39B-208ENST00000428098 FBXO46Q6PJ61 603 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms