RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 FAM114A1Q8IWE2 563 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 SAMM50Q9Y512 469 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 UBE3BQ7Z3V4 1068 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 NGLY1Q96IV0 654 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 KRT28Q7Z3Y7 464 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 IFNL2Q8IZJ0 200 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 TTC21BQ7Z4L5 1316 aa20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
ARHGEF28-203ENST00000426542 NEMFO60524 1076 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 STAMBPO95630 424 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 CABP5Q9NP86 173 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 MBIPQ9NS73 344 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 TEX13AQ9BXU3 409 aaPredicted RBP20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 C11orf95C9JLR9 678 aaPredicted RBP20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 ADCY5O95622 1261 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 SMC1AQ14683 1233 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 TAOK3Q9H2K8 898 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 PIK3R4Q99570 1358 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 CD109Q6YHK3 1445 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 FAM83GA6ND36 823 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 NOP2P46087 812 aaKnown RBP20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 SPECC1Q5M775 1068 aa20.65■□□□□ 0.9
ARHGEF28-203ENST00000426542 STXBP4Q6ZWJ1 553 aa20.64■□□□□ 0.9
ARHGEF28-203ENST00000426542 NAA15Q9BXJ9 866 aaKnown RBP20.64■□□□□ 0.9
ARHGEF28-203ENST00000426542 PI4KAP2A4QPH2 592 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 UBA7P41226 1012 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 RNF187Q5TA31 235 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 PI4KAP1Q8N8J0 262 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 RBM27Q9P2N5 1060 aaKnown RBP20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 HLA-DOAP06340 250 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 PUF60Q9UHX1 559 aaKnown RBP20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 TTC22Q5TAA0 569 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 PRDM10Q9NQV6 1147 aa20.64■□□□□ 0.89
ARHGEF28-203ENST00000426542 MMRN2Q9H8L6 949 aa20.63■□□□□ 0.89
ARHGEF28-203ENST00000426542 KANK3Q6NY19 840 aa20.63■□□□□ 0.89
ARHGEF28-203ENST00000426542 PYM1Q9BRP8 204 aaKnown RBP20.63■□□□□ 0.89
ARHGEF28-203ENST00000426542 KIF14Q15058 1648 aa20.63■□□□□ 0.89
ARHGEF28-203ENST00000426542 HMG20BQ9P0W2 317 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 NF2P35240 595 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 SPDYE4A6NLX3 237 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 TMEM87AQ8NBN3 555 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 CCDC102BQ68D86 513 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 PKNOX2Q96KN3 472 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
ARHGEF28-203ENST00000426542 TTC21AQ8NDW8 1320 aa20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 POTEB2H3BUK9 544 aa20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 SNW1Q13573 536 aaKnown RBP20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 CRNKL1Q9BZJ0 848 aaKnown RBP20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.61■□□□□ 0.891e-8■■□□□ 13.6
ARHGEF28-203ENST00000426542 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 EXOC1Q9NV70 894 aa20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 ANKRD24Q8TF21 1146 aa20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 COMMD10Q9Y6G5 202 aa20.61■□□□□ 0.89
ARHGEF28-203ENST00000426542 PCF11O94913 1555 aaKnown RBP20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 GIMAP7Q8NHV1 300 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 MYO1BO43795 1136 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 RFC4P35249 363 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 BICD1Q96G01 975 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 JADE2Q9NQC1 790 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 ZNF165P49910 485 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 CTR9Q6PD62 1173 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 MCM5P33992 734 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 UBE2HP62256 183 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 TRIM47Q96LD4 638 aa20.6■□□□□ 0.89
ARHGEF28-203ENST00000426542 ANXA1P04083 346 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 SNRPA1P09661 255 aaKnown RBP20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 MAATS1Q7Z4T9 603 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 LRRC27Q9C0I9 530 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 NOS1P29475 1434 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 TBCAO75347 108 aaKnown RBP20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 GSTO1P78417 241 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 WTAPQ15007 396 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 MICALCLQ6ZW33 695 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 CEBPAP49715 358 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 DRC1Q96MC2 740 aa20.59■□□□□ 0.89
ARHGEF28-203ENST00000426542 KLF18A0A0U1RQI7 1052 aa20.58■□□□□ 0.89
ARHGEF28-203ENST00000426542 NSD2O96028 1365 aa20.58■□□□□ 0.89
ARHGEF28-203ENST00000426542 ST5P78524 1137 aa20.58■□□□□ 0.89
ARHGEF28-203ENST00000426542 CCDC152Q4G0S7 254 aa20.58■□□□□ 0.89
ARHGEF28-203ENST00000426542 SMARCC1Q92922 1105 aaPredicted RBP20.58■□□□□ 0.89
ARHGEF28-203ENST00000426542 IQGAP2Q13576 1575 aa20.58■□□□□ 0.89
ARHGEF28-203ENST00000426542 NECAB1Q8N987 351 aa20.58■□□□□ 0.88
ARHGEF28-203ENST00000426542 ABCC5O15440 1437 aa20.58■□□□□ 0.88
ARHGEF28-203ENST00000426542 TSPY3P0CV98 308 aa20.58■□□□□ 0.88
ARHGEF28-203ENST00000426542 TSPY8P0CW00 308 aa20.58■□□□□ 0.88
ARHGEF28-203ENST00000426542 GOLGA6L9A6NEM1 432 aa20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 CCDC175P0C221 793 aa20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 IGHDP01880 384 aa20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 SCAF11Q99590 1463 aaKnown RBP20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 RRAGBQ5VZM2 374 aa20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 ZSCAN16Q9H4T2 348 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 STX8Q9UNK0 236 aa20.57■□□□□ 0.88
ARHGEF28-203ENST00000426542 SYKP43405 635 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms