RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 PCCAP05165 728 aaPredicted RBP18.73■□□□□ 0.59
GINS3-203ENST00000426538 CLEC4GQ6UXB4 293 aa18.73■□□□□ 0.59
GINS3-203ENST00000426538 ZNF34Q8IZ26 560 aa18.73■□□□□ 0.59
GINS3-203ENST00000426538 BCL11AQ9H165 835 aa18.73■□□□□ 0.59
GINS3-203ENST00000426538 NUP98P52948 1817 aa18.72■□□□□ 0.59
GINS3-203ENST00000426538 PLSCR1O15162 318 aa18.72■□□□□ 0.59
GINS3-203ENST00000426538 RAB11FIP3O75154 756 aa18.72■□□□□ 0.59
GINS3-203ENST00000426538 EPHA10Q5JZY3 1008 aa18.72■□□□□ 0.59
GINS3-203ENST00000426538 LRRCC1Q9C099 1032 aa18.72■□□□□ 0.59
GINS3-203ENST00000426538 ZPR1O75312 459 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 PDE4AP27815 886 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 FAM89AQ96GI7 184 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
GINS3-203ENST00000426538 TAF1LQ8IZX4 1826 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 TXNRD1Q16881 649 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 RABL6Q3YEC7 729 aaPredicted RBP18.71■□□□□ 0.59
GINS3-203ENST00000426538 PARP10Q53GL7 1025 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 TRAPPC3LQ5T215 181 aa18.71■□□□□ 0.59
GINS3-203ENST00000426538 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
GINS3-203ENST00000426538 NARFQ9UHQ1 456 aa18.7■□□□□ 0.58
GINS3-203ENST00000426538 NIP7Q9Y221 180 aaKnown RBP eCLIP18.7■□□□□ 0.58
GINS3-203ENST00000426538 NOP58Q9Y2X3 529 aaKnown RBP18.7■□□□□ 0.58
GINS3-203ENST00000426538 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
GINS3-203ENST00000426538 RGL2O15211 777 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 SMARCA5O60264 1052 aaPredicted RBP18.69■□□□□ 0.58
GINS3-203ENST00000426538 LMBR1LQ6UX01 489 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 C4BP0C0L5 1744 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 ANKRD36CQ5JPF3 1778 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 RFC4P35249 363 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 FOXO4P98177 505 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 G3BP1Q13283 466 aaKnown RBP eCLIP18.69■□□□□ 0.58
GINS3-203ENST00000426538 ARHGEF1Q92888 912 aaKnown RBP18.69■□□□□ 0.58
GINS3-203ENST00000426538 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
GINS3-203ENST00000426538 SMIM5Q71RC9 77 aa18.68■□□□□ 0.58
GINS3-203ENST00000426538 UBN2Q6ZU65 1347 aa18.68■□□□□ 0.58
GINS3-203ENST00000426538 CDHR2Q9BYE9 1310 aa18.68■□□□□ 0.58
GINS3-203ENST00000426538 PHF14O94880 888 aa18.67■□□□□ 0.58
GINS3-203ENST00000426538 ADRA2BP18089 450 aa18.67■□□□□ 0.58
GINS3-203ENST00000426538 USPL1Q5W0Q7 1092 aa18.67■□□□□ 0.58
GINS3-203ENST00000426538 ERC1Q8IUD2 1116 aa18.67■□□□□ 0.58
GINS3-203ENST00000426538 PROM2Q8N271 834 aa18.67■□□□□ 0.58
GINS3-203ENST00000426538 UTP14AQ9BVJ6 771 aaKnown RBP18.67■□□□□ 0.58
GINS3-203ENST00000426538 PLA2G12BQ9BX93 195 aa18.67■□□□□ 0.58
GINS3-203ENST00000426538 PA2G4Q9UQ80 394 aaKnown RBP18.67■□□□□ 0.58
GINS3-203ENST00000426538 SUSD4Q5VX71 490 aa18.66■□□□□ 0.58
GINS3-203ENST00000426538 RHPN1Q8TCX5 695 aa18.66■□□□□ 0.58
GINS3-203ENST00000426538 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
GINS3-203ENST00000426538 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
GINS3-203ENST00000426538 HSP90B1P14625 803 aaKnown RBP18.66■□□□□ 0.58
GINS3-203ENST00000426538 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
GINS3-203ENST00000426538 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
GINS3-203ENST00000426538 SH3TC1Q8TE82 1336 aa18.65■□□□□ 0.58
GINS3-203ENST00000426538 FAM161AQ3B820 660 aa18.65■□□□□ 0.58
GINS3-203ENST00000426538 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
GINS3-203ENST00000426538 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
GINS3-203ENST00000426538 SRP68Q9UHB9 627 aaKnown RBP18.65■□□□□ 0.58
GINS3-203ENST00000426538 CCDC57Q2TAC2 916 aa18.64■□□□□ 0.57
GINS3-203ENST00000426538 SIL1Q9H173 461 aa18.64■□□□□ 0.57
GINS3-203ENST00000426538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.63■□□□□ 0.57
GINS3-203ENST00000426538 PDE8AO60658 829 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 SSFA2P28290 1259 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 PTPN12Q05209 780 aaKnown RBP18.63■□□□□ 0.57
GINS3-203ENST00000426538 BICDL1Q6ZP65 573 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 AMIGO3Q86WK7 504 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 PLEKHM2Q8IWE5 1019 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 KLHDC4Q8TBB5 520 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 IL1RAPL2Q9NP60 686 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 BCORQ6W2J9 1755 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 RFX5P48382 616 aaPredicted RBP18.63■□□□□ 0.57
GINS3-203ENST00000426538 BCL2L12Q9HB09 334 aa18.63■□□□□ 0.57
GINS3-203ENST00000426538 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
GINS3-203ENST00000426538 CSF1RP07333 972 aa18.62■□□□□ 0.57
GINS3-203ENST00000426538 TBC1D9BQ66K14 1250 aa18.62■□□□□ 0.57
GINS3-203ENST00000426538 CLASRPQ8N2M8 674 aaKnown RBP18.62■□□□□ 0.57
GINS3-203ENST00000426538 BACH2Q9BYV9 841 aa18.62■□□□□ 0.57
GINS3-203ENST00000426538 NTSR2O95665 410 aa18.61■□□□□ 0.57
GINS3-203ENST00000426538 GTF2E1P29083 439 aaPredicted RBP18.61■□□□□ 0.57
GINS3-203ENST00000426538 CTSWP56202 376 aa18.61■□□□□ 0.57
GINS3-203ENST00000426538 IFIT5Q13325 482 aaKnown RBP18.6■□□□□ 0.57
GINS3-203ENST00000426538 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
GINS3-203ENST00000426538 TTLL11Q8NHH1 800 aa18.6■□□□□ 0.57
GINS3-203ENST00000426538 OTUD7AQ8TE49 926 aaPredicted RBP18.6■□□□□ 0.57
GINS3-203ENST00000426538 NYXQ9GZU5 481 aa18.6■□□□□ 0.57
GINS3-203ENST00000426538 TFCP2L1Q9NZI6 479 aa18.6■□□□□ 0.57
GINS3-203ENST00000426538 BMP2KLQ5H9B9 411 aa18.6■□□□□ 0.57
GINS3-203ENST00000426538 TAF7LQ5H9L4 462 aa18.6■□□□□ 0.57
GINS3-203ENST00000426538 CCDC85AQ96PX6 553 aaPredicted RBP18.6■□□□□ 0.57
GINS3-203ENST00000426538 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
GINS3-203ENST00000426538 SASH1O94885 1247 aa18.59■□□□□ 0.57
GINS3-203ENST00000426538 HCLS1P14317 486 aaPredicted RBP18.59■□□□□ 0.57
GINS3-203ENST00000426538 PDE1AP54750 535 aa18.59■□□□□ 0.57
GINS3-203ENST00000426538 NUTM1Q86Y26 1132 aa18.59■□□□□ 0.57
GINS3-203ENST00000426538 MX1P20591 662 aa18.58■□□□□ 0.57
GINS3-203ENST00000426538 C8orf34Q49A92 452 aa18.58■□□□□ 0.57
GINS3-203ENST00000426538 TPTE2Q6XPS3 522 aa18.58■□□□□ 0.57
GINS3-203ENST00000426538 ILDR1Q86SU0 546 aaPredicted RBP18.58■□□□□ 0.57
GINS3-203ENST00000426538 OSBPL3Q9H4L5 887 aa18.58■□□□□ 0.57
GINS3-203ENST00000426538 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.56
GINS3-203ENST00000426538 ANKRD18BA2A2Z9 1011 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms