RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 HOXA10P31260 410 aaPredicted RBP23.81■■□□□ 1.4
MSH5-207ENST00000425703 GOLGA2Q08379 1002 aa23.81■■□□□ 1.4
MSH5-207ENST00000425703 TWISTNBQ3B726 338 aaPredicted RBP23.81■■□□□ 1.4
MSH5-207ENST00000425703 C7orf43Q8WVR3 580 aa23.81■■□□□ 1.4
MSH5-207ENST00000425703 SALL2Q9Y467 1007 aaPredicted RBP23.81■■□□□ 1.4
MSH5-207ENST00000425703 LTBP3Q9NS15 1303 aa23.81■■□□□ 1.4
MSH5-207ENST00000425703 FANCIQ9NVI1 1328 aa23.81■■□□□ 1.4
MSH5-207ENST00000425703 CCER2I3L3R5 266 aa23.8■■□□□ 1.4
MSH5-207ENST00000425703 TRIM28Q13263 835 aaKnown RBP23.8■■□□□ 1.4
MSH5-207ENST00000425703 ISCA1Q9BUE6 129 aa23.8■■□□□ 1.4
MSH5-207ENST00000425703 RASSF7Q02833 373 aa23.79■■□□□ 1.4
MSH5-207ENST00000425703 NLRP3Q96P20 1036 aa23.79■■□□□ 1.4
MSH5-207ENST00000425703 PHAXQ9H814 394 aaKnown RBP23.79■■□□□ 1.4
MSH5-207ENST00000425703 ARFGEF2Q9Y6D5 1785 aa23.78■■□□□ 1.4
MSH5-207ENST00000425703 RPGRQ92834 1020 aaKnown RBP23.78■■□□□ 1.4
MSH5-207ENST00000425703 STK31Q9BXU1 1019 aa23.78■■□□□ 1.4
MSH5-207ENST00000425703 TRMT112Q9UI30 125 aaKnown RBP23.78■■□□□ 1.4
MSH5-207ENST00000425703 SH3TC1Q8TE82 1336 aa23.78■■□□□ 1.4
MSH5-207ENST00000425703 ANKRD36CQ5JPF3 1778 aa23.78■■□□□ 1.4
MSH5-207ENST00000425703 TNRC6CQ9HCJ0 1690 aaKnown RBP23.77■■□□□ 1.4
MSH5-207ENST00000425703 DDX58O95786 925 aaKnown RBP23.77■■□□□ 1.4
MSH5-207ENST00000425703 RIC3Q7Z5B4 369 aa23.77■■□□□ 1.4
MSH5-207ENST00000425703 CRAMP1Q96RY5 1269 aa23.77■■□□□ 1.4
MSH5-207ENST00000425703 TAOK3Q9H2K8 898 aa23.77■■□□□ 1.4
MSH5-207ENST00000425703 MYH16Q9H6N6 1097 aa23.77■■□□□ 1.4
MSH5-207ENST00000425703 ZNF219Q9P2Y4 722 aaPredicted RBP23.77■■□□□ 1.4
MSH5-207ENST00000425703 SLX4Q8IY92 1834 aa23.77■■□□□ 1.4
MSH5-207ENST00000425703 PRELPP51888 382 aa23.76■■□□□ 1.39
MSH5-207ENST00000425703 CCDC93Q567U6 631 aa23.76■■□□□ 1.39
MSH5-207ENST00000425703 RBM17Q96I25 401 aaKnown RBP23.76■■□□□ 1.39
MSH5-207ENST00000425703 ZNF521Q96K83 1311 aa23.76■■□□□ 1.39
MSH5-207ENST00000425703 ZNF526Q8TF50 670 aaPredicted RBP23.75■■□□□ 1.39
MSH5-207ENST00000425703 CC2D2BQ6DHV5 1058 aa23.74■■□□□ 1.39
MSH5-207ENST00000425703 RTKN2Q8IZC4 609 aa23.74■■□□□ 1.39
MSH5-207ENST00000425703 SBF1O95248 1867 aa23.74■■□□□ 1.39
MSH5-207ENST00000425703 ATP5J2-PTCD1G3V325 749 aa23.73■■□□□ 1.39
MSH5-207ENST00000425703 GRIPAP1Q4V328 841 aa23.73■■□□□ 1.39
MSH5-207ENST00000425703 C3orf67Q6ZVT6 689 aa23.73■■□□□ 1.39
MSH5-207ENST00000425703 SPINK5Q9NQ38 1064 aaPredicted RBP23.73■■□□□ 1.39
MSH5-207ENST00000425703 FER1L6Q2WGJ9 1857 aa23.73■■□□□ 1.39
MSH5-207ENST00000425703 VAMP4O75379 141 aa23.72■■□□□ 1.39
MSH5-207ENST00000425703 C1QTNF8P60827 252 aa23.72■■□□□ 1.39
MSH5-207ENST00000425703 KDM2BQ8NHM5 1336 aa23.72■■□□□ 1.39
MSH5-207ENST00000425703 SLC4A2P04920 1241 aa23.71■■□□□ 1.39
MSH5-207ENST00000425703 EXOSC9Q06265 439 aaKnown RBP23.71■■□□□ 1.39
MSH5-207ENST00000425703 KSR2Q6VAB6 950 aa23.71■■□□□ 1.39
MSH5-207ENST00000425703 CCDC191Q8NCU4 936 aa23.71■■□□□ 1.39
MSH5-207ENST00000425703 METTL22Q9BUU2 404 aaPredicted RBP23.71■■□□□ 1.39
MSH5-207ENST00000425703 HCLS1P14317 486 aaPredicted RBP23.7■■□□□ 1.38
MSH5-207ENST00000425703 FKBP4Q02790 459 aaKnown RBP eCLIP23.7■■□□□ 1.38
MSH5-207ENST00000425703 SYNE4Q8N205 404 aa23.7■■□□□ 1.38
MSH5-207ENST00000425703 KIF3CO14782 793 aa23.69■■□□□ 1.38
MSH5-207ENST00000425703 HSP90B1P14625 803 aaKnown RBP23.69■■□□□ 1.38
MSH5-207ENST00000425703 ZBTB38Q8NAP3 1195 aaPredicted RBP23.69■■□□□ 1.38
MSH5-207ENST00000425703 FAM89AQ96GI7 184 aa23.69■■□□□ 1.38
MSH5-207ENST00000425703 MYD88Q99836 296 aa23.69■■□□□ 1.38
MSH5-207ENST00000425703 SNED1Q8TER0 1413 aa23.68■■□□□ 1.38
MSH5-207ENST00000425703 PSMD1Q99460 953 aa23.68■■□□□ 1.38
MSH5-207ENST00000425703 MAP3K2Q9Y2U5 619 aa23.68■■□□□ 1.38
MSH5-207ENST00000425703 PI4KAP2A4QPH2 592 aa23.67■■□□□ 1.38
MSH5-207ENST00000425703 PPEF1O14829 653 aaPredicted RBP23.67■■□□□ 1.38
MSH5-207ENST00000425703 BBOX1O75936 387 aa23.67■■□□□ 1.38
MSH5-207ENST00000425703 PI4KAP1Q8N8J0 262 aa23.67■■□□□ 1.38
MSH5-207ENST00000425703 CACNA1SQ13698 1873 aa23.66■■□□□ 1.38
MSH5-207ENST00000425703 ABCC4O15439 1325 aa23.66■■□□□ 1.38
MSH5-207ENST00000425703 GLTPD2A6NH11 291 aa23.66■■□□□ 1.38
MSH5-207ENST00000425703 TCERG1O14776 1098 aaKnown RBP23.66■■□□□ 1.38
MSH5-207ENST00000425703 FLIIQ13045 1269 aa23.66■■□□□ 1.38
MSH5-207ENST00000425703 SF3B3Q15393 1217 aaKnown RBP23.66■■□□□ 1.38
MSH5-207ENST00000425703 OLFM4Q6UX06 510 aa23.66■■□□□ 1.38
MSH5-207ENST00000425703 DDX46Q7L014 1031 aaKnown RBP23.66■■□□□ 1.38
MSH5-207ENST00000425703 CWC25Q9NXE8 425 aaPredicted RBP23.66■■□□□ 1.38
MSH5-207ENST00000425703 IRS4O14654 1257 aaPredicted RBP23.65■■□□□ 1.38
MSH5-207ENST00000425703 PCCAP05165 728 aaPredicted RBP23.65■■□□□ 1.38
MSH5-207ENST00000425703 NEXNQ0ZGT2 675 aa23.65■■□□□ 1.38
MSH5-207ENST00000425703 DPY19L2Q6NUT2 758 aa23.65■■□□□ 1.38
MSH5-207ENST00000425703 G2E3Q7L622 706 aa23.65■■□□□ 1.38
MSH5-207ENST00000425703 TMX4Q9H1E5 349 aaPredicted RBP23.65■■□□□ 1.38
MSH5-207ENST00000425703 NMRK2Q9NPI5 230 aa23.65■■□□□ 1.38
MSH5-207ENST00000425703 ATP6V0A2Q9Y487 856 aa23.65■■□□□ 1.38
MSH5-207ENST00000425703 E9PSI1 815 aa23.64■■□□□ 1.37
MSH5-207ENST00000425703 TMC4Q7Z404 712 aa23.64■■□□□ 1.37
MSH5-207ENST00000425703 GRAPQ13588 217 aa23.63■■□□□ 1.37
MSH5-207ENST00000425703 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
MSH5-207ENST00000425703 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
MSH5-207ENST00000425703 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
MSH5-207ENST00000425703 SP8Q8IXZ3 490 aa23.62■■□□□ 1.37
MSH5-207ENST00000425703 ZNF428Q96B54 188 aa23.62■■□□□ 1.37
MSH5-207ENST00000425703 ZNF277Q9NRM2 450 aaPredicted RBP23.62■■□□□ 1.37
MSH5-207ENST00000425703 TIAM2Q8IVF5 1701 aa23.62■■□□□ 1.37
MSH5-207ENST00000425703 TOMM70O94826 608 aa23.61■■□□□ 1.37
MSH5-207ENST00000425703 IARSP41252 1262 aaKnown RBP23.61■■□□□ 1.37
MSH5-207ENST00000425703 FKBP5Q13451 457 aaPredicted RBP23.61■■□□□ 1.37
MSH5-207ENST00000425703 DICER1Q9UPY3 1922 aaKnown RBP23.61■■□□□ 1.37
MSH5-207ENST00000425703 CDHR2Q9BYE9 1310 aa23.6■■□□□ 1.37
MSH5-207ENST00000425703 RTL5Q5HYW3 569 aaPredicted RBP23.6■■□□□ 1.37
MSH5-207ENST00000425703 VPS33BQ9H267 617 aa23.6■■□□□ 1.37
MSH5-207ENST00000425703 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
MSH5-207ENST00000425703 DDX60Q8IY21 1712 aaKnown RBP23.59■■□□□ 1.37
MSH5-207ENST00000425703 NEURL1BA8MQ27 555 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms