RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 CACTINQ8WUQ7 758 aaKnown RBP16.02■□□□□ 0.16
LRCH3-203ENST00000425562 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 CHPF2Q9P2E5 772 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 TTC21AQ8NDW8 1320 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 ST3GAL1Q11201 340 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 TMEM87AQ8NBN3 555 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 CCDC112Q8NEF3 446 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 BICD2Q8TD16 824 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 ATP6V1DQ9Y5K8 247 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 TAF6LQ9Y6J9 622 aa16.02■□□□□ 0.15
LRCH3-203ENST00000425562 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
LRCH3-203ENST00000425562 MPRIPQ6WCQ1 1025 aa16.01■□□□□ 0.15
LRCH3-203ENST00000425562 KDRP35968 1356 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 PI4KAP2A4QPH2 592 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 ZSCAN25Q6NSZ9 544 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 PI4KAP1Q8N8J0 262 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 TPCN1Q9ULQ1 816 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
LRCH3-203ENST00000425562 KIF20AO95235 890 aa16■□□□□ 0.15
LRCH3-203ENST00000425562 NR1I2O75469 434 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 NBPF6Q5VWK0 638 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 NBPF4Q96M43 638 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 MAP3K5Q99683 1374 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 ZNF165P49910 485 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 SPATA32Q96LK8 384 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 FAM227BQ96M60 508 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 CCDC9Q9Y3X0 531 aaKnown RBP15.99■□□□□ 0.15
LRCH3-203ENST00000425562 USP16Q9Y5T5 823 aa15.99■□□□□ 0.15
LRCH3-203ENST00000425562 FMN2Q9NZ56 1722 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 PRAMEF22A3QJZ6 481 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 CTIFO43310 598 aaKnown RBP15.98■□□□□ 0.15
LRCH3-203ENST00000425562 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 KRT85P78386 507 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 ZNF215Q9UL58 517 aaPredicted RBP15.98■□□□□ 0.15
LRCH3-203ENST00000425562 CYP46A1Q9Y6A2 500 aa15.98■□□□□ 0.15
LRCH3-203ENST00000425562 LARP1Q6PKG0 1096 aaKnown RBP15.98■□□□□ 0.15
LRCH3-203ENST00000425562 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.15
LRCH3-203ENST00000425562 NALCNQ8IZF0 1738 aa15.97■□□□□ 0.15
LRCH3-203ENST00000425562 FGD1P98174 961 aa15.97■□□□□ 0.15
LRCH3-203ENST00000425562 ZNF75DP51815 510 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 ELF2Q15723 593 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 LRRC2Q9BYS8 371 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 OGFRQ9NZT2 677 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 PIK3C2AO00443 1686 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 CEP135Q66GS9 1140 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 DIP2AQ14689 1571 aa15.96■□□□□ 0.15
LRCH3-203ENST00000425562 JAK2O60674 1132 aa15.96■□□□□ 0.14
LRCH3-203ENST00000425562 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.14
LRCH3-203ENST00000425562 NDUFB9Q9Y6M9 179 aa15.96■□□□□ 0.14
LRCH3-203ENST00000425562 AIMP1Q12904 312 aaKnown RBP15.95■□□□□ 0.14
LRCH3-203ENST00000425562 PROSER3Q2NL68 480 aa15.95■□□□□ 0.14
LRCH3-203ENST00000425562 KMT5BQ4FZB7 885 aa15.95■□□□□ 0.14
LRCH3-203ENST00000425562 ESCO1Q5FWF5 840 aa15.95■□□□□ 0.14
LRCH3-203ENST00000425562 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
LRCH3-203ENST00000425562 SIL1Q9H173 461 aa15.95■□□□□ 0.14
LRCH3-203ENST00000425562 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
LRCH3-203ENST00000425562 TBX22Q9Y458 520 aa15.95■□□□□ 0.14
LRCH3-203ENST00000425562 SMTNL1A8MU46 457 aa15.94■□□□□ 0.14
LRCH3-203ENST00000425562 CHGBP05060 677 aa15.94■□□□□ 0.14
LRCH3-203ENST00000425562 EDC3Q96F86 508 aaKnown RBP15.94■□□□□ 0.14
LRCH3-203ENST00000425562 CCDC8Q9H0W5 538 aaPredicted RBP15.94■□□□□ 0.14
LRCH3-203ENST00000425562 RBM8AQ9Y5S9 174 aaKnown RBP15.94■□□□□ 0.14
LRCH3-203ENST00000425562 CWF19L2Q2TBE0 894 aaKnown RBP15.94■□□□□ 0.14
LRCH3-203ENST00000425562 TEFQ10587 303 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
LRCH3-203ENST00000425562 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.93■□□□□ 0.14
LRCH3-203ENST00000425562 KIF13AQ9H1H9 1805 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 EIF4A1P60842 406 aaKnown RBP15.93■□□□□ 0.14
LRCH3-203ENST00000425562 C11orf57Q6ZUT1 292 aaPredicted RBP15.93■□□□□ 0.14
LRCH3-203ENST00000425562 PLCD3Q8N3E9 789 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 GTF3C6Q969F1 213 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 KIF18AQ8NI77 898 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
LRCH3-203ENST00000425562 SLFN14P0C7P3 912 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 SKILP12757 684 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 ZKSCAN1P17029 563 aaPredicted RBP15.92■□□□□ 0.14
LRCH3-203ENST00000425562 PSME1Q06323 249 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 LRRN4CLQ8ND94 238 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 KIF1BPQ96EK5 621 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 PGBD1Q96JS3 809 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 PHF8Q9UPP1 1060 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 GOLGA6L19H0YKK7 550 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 GUCY1B3Q02153 619 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 LEO1Q8WVC0 666 aaPredicted RBP15.92■□□□□ 0.14
LRCH3-203ENST00000425562 BOLA2Q9H3K6 86 aa15.92■□□□□ 0.14
LRCH3-203ENST00000425562 DDX41Q9UJV9 622 aaKnown RBP15.92■□□□□ 0.14
LRCH3-203ENST00000425562 XRN1Q8IZH2 1706 aaKnown RBP15.91■□□□□ 0.14
LRCH3-203ENST00000425562 HTATSF1O43719 755 aaKnown RBP15.91■□□□□ 0.14
LRCH3-203ENST00000425562 TPM3P06753 285 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms