RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 PPP1R42Q7Z4L9 355 aa24.05■■□□□ 1.44
NUP50-207ENST00000424634 RIC1Q4ADV7 1423 aa24.04■■□□□ 1.44
NUP50-207ENST00000424634 POTECB2RU33 542 aa24.04■■□□□ 1.44
NUP50-207ENST00000424634 HOXA10P31260 410 aaPredicted RBP24.04■■□□□ 1.44
NUP50-207ENST00000424634 C16orf71Q8IYS4 520 aaPredicted RBP24.04■■□□□ 1.44
NUP50-207ENST00000424634 ANKRD36CQ5JPF3 1778 aa24.03■■□□□ 1.44
NUP50-207ENST00000424634 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
NUP50-207ENST00000424634 IFT57Q9NWB7 429 aa24.03■■□□□ 1.44
NUP50-207ENST00000424634 TCIRG1Q13488 830 aa24.02■■□□□ 1.44
NUP50-207ENST00000424634 SLC10A5Q5PT55 438 aa24.02■■□□□ 1.44
NUP50-207ENST00000424634 NLRP10Q86W26 655 aa24.02■■□□□ 1.44
NUP50-207ENST00000424634 VEGFAP15692 232 aaPredicted RBP24.01■■□□□ 1.43
NUP50-207ENST00000424634 GNAI1P63096 354 aa24.01■■□□□ 1.43
NUP50-207ENST00000424634 FKBP4Q02790 459 aaKnown RBP eCLIP24.01■■□□□ 1.43
NUP50-207ENST00000424634 DPY19L2Q6NUT2 758 aa24.01■■□□□ 1.43
NUP50-207ENST00000424634 SYNE4Q8N205 404 aa24.01■■□□□ 1.43
NUP50-207ENST00000424634 DBF4Q9UBU7 674 aaPredicted RBP24.01■■□□□ 1.43
NUP50-207ENST00000424634 HSP90AB3PQ58FF7 597 aa24■■□□□ 1.43
NUP50-207ENST00000424634 SLC51AQ86UW1 340 aa24■■□□□ 1.43
NUP50-207ENST00000424634 RTKN2Q8IZC4 609 aa24■■□□□ 1.43
NUP50-207ENST00000424634 RPGRQ92834 1020 aaKnown RBP24■■□□□ 1.43
NUP50-207ENST00000424634 ZNF277Q9NRM2 450 aaPredicted RBP24■■□□□ 1.43
NUP50-207ENST00000424634 SNED1Q8TER0 1413 aa24■■□□□ 1.43
NUP50-207ENST00000424634 WDR90Q96KV7 1748 aa23.99■■□□□ 1.43
NUP50-207ENST00000424634 ELL2O00472 640 aaPredicted RBP23.99■■□□□ 1.43
NUP50-207ENST00000424634 CALD1Q05682 793 aaKnown RBP23.99■■□□□ 1.43
NUP50-207ENST00000424634 CRAMP1Q96RY5 1269 aa23.99■■□□□ 1.43
NUP50-207ENST00000424634 DDNO94850 711 aaPredicted RBP23.98■■□□□ 1.43
NUP50-207ENST00000424634 FSTL1Q12841 308 aa23.98■■□□□ 1.43
NUP50-207ENST00000424634 ANKRD13DQ6ZTN6 518 aa23.98■■□□□ 1.43
NUP50-207ENST00000424634 C8orf58Q8NAV2 365 aa23.98■■□□□ 1.43
NUP50-207ENST00000424634 PLBD2Q8NHP8 589 aa23.98■■□□□ 1.43
NUP50-207ENST00000424634 ZNF428Q96B54 188 aa23.98■■□□□ 1.43
NUP50-207ENST00000424634 RBM17Q96I25 401 aaKnown RBP23.98■■□□□ 1.43
NUP50-207ENST00000424634 NLRP3Q96P20 1036 aa23.98■■□□□ 1.43
NUP50-207ENST00000424634 HYPKQ9NX55 129 aa23.97■■□□□ 1.43
NUP50-207ENST00000424634 HCLS1P14317 486 aaPredicted RBP23.96■■□□□ 1.43
NUP50-207ENST00000424634 APLP1P51693 650 aa23.96■■□□□ 1.43
NUP50-207ENST00000424634 LAMB2P55268 1798 aa23.96■■□□□ 1.43
NUP50-207ENST00000424634 RNF123Q5XPI4 1314 aa23.95■■□□□ 1.42
NUP50-207ENST00000424634 ISCA1Q9BUE6 129 aa23.95■■□□□ 1.42
NUP50-207ENST00000424634 TRMT112Q9UI30 125 aaKnown RBP23.95■■□□□ 1.42
NUP50-207ENST00000424634 TCERG1O14776 1098 aaKnown RBP23.94■■□□□ 1.42
NUP50-207ENST00000424634 ANP32CO43423 234 aa23.94■■□□□ 1.42
NUP50-207ENST00000424634 CC2D2BQ6DHV5 1058 aa23.94■■□□□ 1.42
NUP50-207ENST00000424634 PSMD1Q99460 953 aa23.94■■□□□ 1.42
NUP50-207ENST00000424634 PHAXQ9H814 394 aaKnown RBP23.94■■□□□ 1.42
NUP50-207ENST00000424634 MRS2Q9HD23 443 aa23.94■■□□□ 1.42
NUP50-207ENST00000424634 ATP5J2-PTCD1G3V325 749 aa23.93■■□□□ 1.42
NUP50-207ENST00000424634 IARSP41252 1262 aaKnown RBP23.93■■□□□ 1.42
NUP50-207ENST00000424634 DNAJC5GQ8N7S2 189 aa23.93■■□□□ 1.42
NUP50-207ENST00000424634 SMC1BQ8NDV3 1235 aa23.93■■□□□ 1.42
NUP50-207ENST00000424634 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
NUP50-207ENST00000424634 PPEF1O14829 653 aaPredicted RBP23.92■■□□□ 1.42
NUP50-207ENST00000424634 CCDC27Q2M243 656 aa23.92■■□□□ 1.42
NUP50-207ENST00000424634 WWC1Q8IX03 1113 aa23.92■■□□□ 1.42
NUP50-207ENST00000424634 TSPYL6Q8N831 410 aa23.92■■□□□ 1.42
NUP50-207ENST00000424634 ABCC4O15439 1325 aa23.91■■□□□ 1.42
NUP50-207ENST00000424634 ZNF541Q9H0D2 1346 aa23.91■■□□□ 1.42
NUP50-207ENST00000424634 HTRA3P83110 453 aa23.91■■□□□ 1.42
NUP50-207ENST00000424634 TSR2Q969E8 191 aaKnown RBP23.91■■□□□ 1.42
NUP50-207ENST00000424634 TAF1P21675 1872 aa23.91■■□□□ 1.42
NUP50-207ENST00000424634 COL4A5P29400 1685 aa23.89■■□□□ 1.42
NUP50-207ENST00000424634 FZD9O00144 591 aa23.89■■□□□ 1.41
NUP50-207ENST00000424634 FAM89AQ96GI7 184 aa23.89■■□□□ 1.41
NUP50-207ENST00000424634 ATP6V0A2Q9Y487 856 aa23.89■■□□□ 1.41
NUP50-207ENST00000424634 DDX60Q8IY21 1712 aaKnown RBP23.89■■□□□ 1.41
NUP50-207ENST00000424634 TRIM28Q13263 835 aaKnown RBP23.88■■□□□ 1.41
NUP50-207ENST00000424634 GRIPAP1Q4V328 841 aa23.88■■□□□ 1.41
NUP50-207ENST00000424634 L3MBTL3Q96JM7 780 aaPredicted RBP23.88■■□□□ 1.41
NUP50-207ENST00000424634 POTEIP0CG38 1075 aa23.87■■□□□ 1.41
NUP50-207ENST00000424634 POTEJP0CG39 1038 aa23.87■■□□□ 1.41
NUP50-207ENST00000424634 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
NUP50-207ENST00000424634 BBOX1O75936 387 aa23.86■■□□□ 1.41
NUP50-207ENST00000424634 NCBP3Q53F19 620 aaKnown RBP23.86■■□□□ 1.41
NUP50-207ENST00000424634 CCDC30Q5VVM6 783 aa23.86■■□□□ 1.41
NUP50-207ENST00000424634 SCN4AP35499 1836 aa23.85■■□□□ 1.41
NUP50-207ENST00000424634 GOLGA2Q08379 1002 aa23.85■■□□□ 1.41
NUP50-207ENST00000424634 RTL5Q5HYW3 569 aaPredicted RBP23.85■■□□□ 1.41
NUP50-207ENST00000424634 DDX46Q7L014 1031 aaKnown RBP23.85■■□□□ 1.41
NUP50-207ENST00000424634 SP8Q8IXZ3 490 aa23.85■■□□□ 1.41
NUP50-207ENST00000424634 JDP2Q8WYK2 163 aa23.84■■□□□ 1.41
NUP50-207ENST00000424634 TAF1DQ9H5J8 278 aaPredicted RBP23.84■■□□□ 1.41
NUP50-207ENST00000424634 GRAPQ13588 217 aa23.83■■□□□ 1.41
NUP50-207ENST00000424634 SF3B3Q15393 1217 aaKnown RBP23.83■■□□□ 1.41
NUP50-207ENST00000424634 LARGE2Q8N3Y3 721 aa23.83■■□□□ 1.41
NUP50-207ENST00000424634 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
NUP50-207ENST00000424634 MYD88Q99836 296 aa23.83■■□□□ 1.41
NUP50-207ENST00000424634 SALL2Q9Y467 1007 aaPredicted RBP23.83■■□□□ 1.41
NUP50-207ENST00000424634 IL16Q14005 1332 aa23.83■■□□□ 1.4
NUP50-207ENST00000424634 IQCA1LA6NCM1 817 aa23.82■■□□□ 1.4
NUP50-207ENST00000424634 RTFDC1Q9BY42 306 aaPredicted RBP23.82■■□□□ 1.4
NUP50-207ENST00000424634 IRS4O14654 1257 aaPredicted RBP23.81■■□□□ 1.4
NUP50-207ENST00000424634 CHADLQ6NUI6 762 aa23.81■■□□□ 1.4
NUP50-207ENST00000424634 GPC2Q8N158 579 aa23.81■■□□□ 1.4
NUP50-207ENST00000424634 TMX4Q9H1E5 349 aaPredicted RBP23.81■■□□□ 1.4
NUP50-207ENST00000424634 COL4A1P02462 1669 aa23.8■■□□□ 1.4
NUP50-207ENST00000424634 AOC3Q16853 763 aa23.8■■□□□ 1.4
NUP50-207ENST00000424634 TWISTNBQ3B726 338 aaPredicted RBP23.8■■□□□ 1.4
NUP50-207ENST00000424634 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms