RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 NTSR2O95665 410 aa12.06□□□□□ -0.48
NUP50-206ENST00000422489 APLP1P51693 650 aa12.06□□□□□ -0.48
NUP50-206ENST00000422489 GNAI1P63096 354 aa12.06□□□□□ -0.48
NUP50-206ENST00000422489 FKBP4Q02790 459 aaKnown RBP eCLIP12.06□□□□□ -0.48
NUP50-206ENST00000422489 HSP90AB3PQ58FF7 597 aa12.06□□□□□ -0.48
NUP50-206ENST00000422489 LTBP3Q9NS15 1303 aa12.06□□□□□ -0.48
NUP50-206ENST00000422489 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 FSTL1Q12841 308 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 TCIRG1Q13488 830 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 TMX4Q9H1E5 349 aaPredicted RBP12.05□□□□□ -0.48
NUP50-206ENST00000422489 IFT57Q9NWB7 429 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 DBF4Q9UBU7 674 aaPredicted RBP12.05□□□□□ -0.48
NUP50-206ENST00000422489 TRMT112Q9UI30 125 aaKnown RBP12.05□□□□□ -0.48
NUP50-206ENST00000422489 BRCA1P38398 1863 aaKnown RBP12.05□□□□□ -0.48
NUP50-206ENST00000422489 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 KDM3BQ7LBC6 1761 aa12.05□□□□□ -0.48
NUP50-206ENST00000422489 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 ZNF853P0CG23 659 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 HCLS1P14317 486 aaPredicted RBP12.04□□□□□ -0.48
NUP50-206ENST00000422489 HOXA10P31260 410 aaPredicted RBP12.04□□□□□ -0.48
NUP50-206ENST00000422489 CRY2Q49AN0 593 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 SLC10A5Q5PT55 438 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 HYPKQ9NX55 129 aa12.04□□□□□ -0.48
NUP50-206ENST00000422489 POTECB2RU33 542 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 ATP5J2-PTCD1G3V325 749 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 HOXB7P09629 217 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 HTRA3P83110 453 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 PLBD2Q8NHP8 589 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 CRAMP1Q96RY5 1269 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
NUP50-206ENST00000422489 ANKRD31Q8N7Z5 1873 aa12.03□□□□□ -0.48
NUP50-206ENST00000422489 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
NUP50-206ENST00000422489 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
NUP50-206ENST00000422489 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
NUP50-206ENST00000422489 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.49
NUP50-206ENST00000422489 CC2D2BQ6DHV5 1058 aa12.02□□□□□ -0.49
NUP50-206ENST00000422489 RIC3Q7Z5B4 369 aa12.02□□□□□ -0.49
NUP50-206ENST00000422489 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.49
NUP50-206ENST00000422489 JDP2Q8WYK2 163 aa12.02□□□□□ -0.49
NUP50-206ENST00000422489 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
NUP50-206ENST00000422489 RTL5Q5HYW3 569 aaPredicted RBP12.01□□□□□ -0.49
NUP50-206ENST00000422489 DDX46Q7L014 1031 aaKnown RBP12.01□□□□□ -0.49
NUP50-206ENST00000422489 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
NUP50-206ENST00000422489 PHAXQ9H814 394 aaKnown RBP12.01□□□□□ -0.49
NUP50-206ENST00000422489 SH3TC1Q8TE82 1336 aa12.01□□□□□ -0.49
NUP50-206ENST00000422489 IBTKQ9P2D0 1353 aaPredicted RBP12.01□□□□□ -0.49
NUP50-206ENST00000422489 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
NUP50-206ENST00000422489 SLC51AQ86UW1 340 aa12□□□□□ -0.49
NUP50-206ENST00000422489 LARGE2Q8N3Y3 721 aa12□□□□□ -0.49
NUP50-206ENST00000422489 TSR2Q969E8 191 aaKnown RBP12□□□□□ -0.49
NUP50-206ENST00000422489 PSMD1Q99460 953 aa12□□□□□ -0.49
NUP50-206ENST00000422489 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
NUP50-206ENST00000422489 GJA3Q9Y6H8 435 aa12□□□□□ -0.49
NUP50-206ENST00000422489 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
NUP50-206ENST00000422489 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
NUP50-206ENST00000422489 SLX4Q8IY92 1834 aa12□□□□□ -0.49
NUP50-206ENST00000422489 BBOX1O75936 387 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
NUP50-206ENST00000422489 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 MYD88Q99836 296 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 ISCA1Q9BUE6 129 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 RNF123Q5XPI4 1314 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 ZNF541Q9H0D2 1346 aa11.99□□□□□ -0.49
NUP50-206ENST00000422489 ABCC4O15439 1325 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 IQCA1LA6NCM1 817 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 EAPPQ56P03 285 aaPredicted RBP11.98□□□□□ -0.49
NUP50-206ENST00000422489 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 DPP8Q6V1X1 898 aaPredicted RBP11.98□□□□□ -0.49
NUP50-206ENST00000422489 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 SP8Q8IXZ3 490 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 MPNDQ8N594 471 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 DNAJC5GQ8N7S2 189 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 TSPYL6Q8N831 410 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 ATP6V0A2Q9Y487 856 aa11.98□□□□□ -0.49
NUP50-206ENST00000422489 FZD9O00144 591 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 IRS4O14654 1257 aaPredicted RBP11.97□□□□□ -0.49
NUP50-206ENST00000422489 PPIP5K2O43314 1243 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 DDX58O95786 925 aaKnown RBP11.97□□□□□ -0.49
NUP50-206ENST00000422489 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 GRAPQ13588 217 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 CCDC27Q2M243 656 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 SUPT20HQ8NEM7 779 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 GRAPLQ8TC17 118 aaPredicted RBP11.97□□□□□ -0.49
NUP50-206ENST00000422489 JARID2Q92833 1246 aaPredicted RBP11.97□□□□□ -0.49
NUP50-206ENST00000422489 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
NUP50-206ENST00000422489 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
NUP50-206ENST00000422489 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.49
NUP50-206ENST00000422489 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
NUP50-206ENST00000422489 AOC3Q16853 763 aa11.96□□□□□ -0.49
NUP50-206ENST00000422489 STK31Q9BXU1 1019 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms