RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 HSP90AB3PQ58FF7 597 aa33.19■■■□□ 2.9
SMDT1-202ENST00000422252 RPGRQ92834 1020 aaKnown RBP33.19■■■□□ 2.9
SMDT1-202ENST00000422252 VEGFAP15692 232 aaPredicted RBP33.18■■■□□ 2.9
SMDT1-202ENST00000422252 CCDC184Q52MB2 194 aa33.18■■■□□ 2.9
SMDT1-202ENST00000422252 OLFM4Q6UX06 510 aa33.18■■■□□ 2.9
SMDT1-202ENST00000422252 RTKN2Q8IZC4 609 aa33.18■■■□□ 2.9
SMDT1-202ENST00000422252 UTP14AQ9BVJ6 771 aaKnown RBP33.18■■■□□ 2.9
SMDT1-202ENST00000422252 IFT57Q9NWB7 429 aa33.18■■■□□ 2.9
SMDT1-202ENST00000422252 ZNF316A6NFI3 1004 aaPredicted RBP33.17■■■□□ 2.9
SMDT1-202ENST00000422252 FKBP4Q02790 459 aaKnown RBP eCLIP33.17■■■□□ 2.9
SMDT1-202ENST00000422252 DUSP27Q5VZP5 1158 aa33.17■■■□□ 2.9
SMDT1-202ENST00000422252 HOXA10P31260 410 aaPredicted RBP33.16■■■□□ 2.9
SMDT1-202ENST00000422252 GNAI1P63096 354 aa33.16■■■□□ 2.9
SMDT1-202ENST00000422252 FSTL1Q12841 308 aa33.16■■■□□ 2.9
SMDT1-202ENST00000422252 DBF4Q9UBU7 674 aaPredicted RBP33.16■■■□□ 2.9
SMDT1-202ENST00000422252 APLP1P51693 650 aa33.15■■■□□ 2.9
SMDT1-202ENST00000422252 RNF123Q5XPI4 1314 aa33.14■■■□□ 2.9
SMDT1-202ENST00000422252 TCIRG1Q13488 830 aa33.14■■■□□ 2.9
SMDT1-202ENST00000422252 RBM17Q96I25 401 aaKnown RBP33.14■■■□□ 2.9
SMDT1-202ENST00000422252 ANKRD36CQ5JPF3 1778 aa33.14■■■□□ 2.9
SMDT1-202ENST00000422252 NLRP3Q96P20 1036 aa33.13■■■□□ 2.89
SMDT1-202ENST00000422252 WDR90Q96KV7 1748 aa33.12■■■□□ 2.89
SMDT1-202ENST00000422252 SLC10A5Q5PT55 438 aa33.12■■■□□ 2.89
SMDT1-202ENST00000422252 C3orf67Q6ZVT6 689 aa33.12■■■□□ 2.89
SMDT1-202ENST00000422252 NLRP10Q86W26 655 aa33.12■■■□□ 2.89
SMDT1-202ENST00000422252 SMC1BQ8NDV3 1235 aa33.11■■■□□ 2.89
SMDT1-202ENST00000422252 CRAMP1Q96RY5 1269 aa33.11■■■□□ 2.89
SMDT1-202ENST00000422252 ZNF277Q9NRM2 450 aaPredicted RBP33.11■■■□□ 2.89
SMDT1-202ENST00000422252 POTECB2RU33 542 aa33.1■■■□□ 2.89
SMDT1-202ENST00000422252 CC2D2BQ6DHV5 1058 aa33.1■■■□□ 2.89
SMDT1-202ENST00000422252 PLBD2Q8NHP8 589 aa33.1■■■□□ 2.89
SMDT1-202ENST00000422252 HYPKQ9NX55 129 aa33.1■■■□□ 2.89
SMDT1-202ENST00000422252 ANKRD13DQ6ZTN6 518 aa33.09■■■□□ 2.89
SMDT1-202ENST00000422252 SYNE4Q8N205 404 aa33.08■■■□□ 2.89
SMDT1-202ENST00000422252 PSMD1Q99460 953 aa33.08■■■□□ 2.89
SMDT1-202ENST00000422252 SNED1Q8TER0 1413 aa33.08■■■□□ 2.89
SMDT1-202ENST00000422252 ANP32CO43423 234 aa33.07■■■□□ 2.88
SMDT1-202ENST00000422252 DDNO94850 711 aaPredicted RBP33.07■■■□□ 2.88
SMDT1-202ENST00000422252 TRMT112Q9UI30 125 aaKnown RBP33.07■■■□□ 2.88
SMDT1-202ENST00000422252 PPEF1O14829 653 aaPredicted RBP33.06■■■□□ 2.88
SMDT1-202ENST00000422252 IARSP41252 1262 aaKnown RBP33.05■■■□□ 2.88
SMDT1-202ENST00000422252 GRIPAP1Q4V328 841 aa33.05■■■□□ 2.88
SMDT1-202ENST00000422252 SH3TC1Q8TE82 1336 aa33.04■■■□□ 2.88
SMDT1-202ENST00000422252 ELL2O00472 640 aaPredicted RBP33.04■■■□□ 2.88
SMDT1-202ENST00000422252 MRS2Q9HD23 443 aa33.04■■■□□ 2.88
SMDT1-202ENST00000422252 HCLS1P14317 486 aaPredicted RBP33.03■■■□□ 2.88
SMDT1-202ENST00000422252 C8orf58Q8NAV2 365 aa33.02■■■□□ 2.88
SMDT1-202ENST00000422252 TCERG1O14776 1098 aaKnown RBP33.01■■■□□ 2.87
SMDT1-202ENST00000422252 CCDC27Q2M243 656 aa33.01■■■□□ 2.87
SMDT1-202ENST00000422252 ISCA1Q9BUE6 129 aa33.01■■■□□ 2.87
SMDT1-202ENST00000422252 ABCC4O15439 1325 aa33.01■■■□□ 2.87
SMDT1-202ENST00000422252 ZNF541Q9H0D2 1346 aa33■■■□□ 2.87
SMDT1-202ENST00000422252 SLC51AQ86UW1 340 aa32.99■■■□□ 2.87
SMDT1-202ENST00000422252 ZNF428Q96B54 188 aa32.99■■■□□ 2.87
SMDT1-202ENST00000422252 L3MBTL3Q96JM7 780 aaPredicted RBP32.99■■■□□ 2.87
SMDT1-202ENST00000422252 ATP5J2-PTCD1G3V325 749 aa32.98■■■□□ 2.87
SMDT1-202ENST00000422252 FZD9O00144 591 aa32.98■■■□□ 2.87
SMDT1-202ENST00000422252 JDP2Q8WYK2 163 aa32.98■■■□□ 2.87
SMDT1-202ENST00000422252 CHMP4AQ9BY43 222 aa32.98■■■□□ 2.87
SMDT1-202ENST00000422252 TMX4Q9H1E5 349 aaPredicted RBP32.98■■■□□ 2.87
SMDT1-202ENST00000422252 ATP6V0A2Q9Y487 856 aa32.98■■■□□ 2.87
SMDT1-202ENST00000422252 LAMB2P55268 1798 aa32.98■■■□□ 2.87
SMDT1-202ENST00000422252 IQCA1LA6NCM1 817 aa32.97■■■□□ 2.87
SMDT1-202ENST00000422252 GOLGA2Q08379 1002 aa32.97■■■□□ 2.87
SMDT1-202ENST00000422252 WWC1Q8IX03 1113 aa32.97■■■□□ 2.87
SMDT1-202ENST00000422252 DNAJC5GQ8N7S2 189 aa32.97■■■□□ 2.87
SMDT1-202ENST00000422252 PHAXQ9H814 394 aaKnown RBP32.97■■■□□ 2.87
SMDT1-202ENST00000422252 RIC3Q7Z5B4 369 aa32.96■■■□□ 2.87
SMDT1-202ENST00000422252 BBOX1O75936 387 aa32.95■■■□□ 2.87
SMDT1-202ENST00000422252 TRIM28Q13263 835 aaKnown RBP32.95■■■□□ 2.87
SMDT1-202ENST00000422252 CCDC30Q5VVM6 783 aa32.95■■■□□ 2.87
SMDT1-202ENST00000422252 DDX46Q7L014 1031 aaKnown RBP32.95■■■□□ 2.87
SMDT1-202ENST00000422252 HTRA3P83110 453 aa32.94■■■□□ 2.86
SMDT1-202ENST00000422252 NCBP3Q53F19 620 aaKnown RBP32.94■■■□□ 2.86
SMDT1-202ENST00000422252 TSPYL6Q8N831 410 aa32.94■■■□□ 2.86
SMDT1-202ENST00000422252 TSR2Q969E8 191 aaKnown RBP32.94■■■□□ 2.86
SMDT1-202ENST00000422252 FAM89AQ96GI7 184 aa32.94■■■□□ 2.86
SMDT1-202ENST00000422252 LARGE2Q8N3Y3 721 aa32.92■■■□□ 2.86
SMDT1-202ENST00000422252 SCN4AP35499 1836 aa32.92■■■□□ 2.86
SMDT1-202ENST00000422252 GRAPQ13588 217 aa32.91■■■□□ 2.86
SMDT1-202ENST00000422252 SP8Q8IXZ3 490 aa32.91■■■□□ 2.86
SMDT1-202ENST00000422252 GRAPLQ8TC17 118 aaPredicted RBP32.91■■■□□ 2.86
SMDT1-202ENST00000422252 COL4A5P29400 1685 aa32.91■■■□□ 2.86
SMDT1-202ENST00000422252 DDX60Q8IY21 1712 aaKnown RBP32.91■■■□□ 2.86
SMDT1-202ENST00000422252 CHADLQ6NUI6 762 aa32.9■■■□□ 2.86
SMDT1-202ENST00000422252 GPC2Q8N158 579 aa32.9■■■□□ 2.86
SMDT1-202ENST00000422252 TAF1DQ9H5J8 278 aaPredicted RBP32.9■■■□□ 2.86
SMDT1-202ENST00000422252 IL16Q14005 1332 aa32.9■■■□□ 2.86
SMDT1-202ENST00000422252 POTEIP0CG38 1075 aa32.89■■■□□ 2.86
SMDT1-202ENST00000422252 POTEJP0CG39 1038 aa32.89■■■□□ 2.86
SMDT1-202ENST00000422252 EIF6P56537 245 aaKnown RBP32.89■■■□□ 2.86
SMDT1-202ENST00000422252 HACL1Q9UJ83 578 aa32.89■■■□□ 2.86
SMDT1-202ENST00000422252 DDX58O95786 925 aaKnown RBP32.88■■■□□ 2.85
SMDT1-202ENST00000422252 MYD88Q99836 296 aa32.88■■■□□ 2.85
SMDT1-202ENST00000422252 VPS33BQ9H267 617 aa32.88■■■□□ 2.85
SMDT1-202ENST00000422252 SF3B3Q15393 1217 aaKnown RBP32.87■■■□□ 2.85
SMDT1-202ENST00000422252 RTL5Q5HYW3 569 aaPredicted RBP32.87■■■□□ 2.85
SMDT1-202ENST00000422252 SUPT20HQ8NEM7 779 aa32.87■■■□□ 2.85
SMDT1-202ENST00000422252 RTFDC1Q9BY42 306 aaPredicted RBP32.87■■■□□ 2.85
SMDT1-202ENST00000422252 IRS4O14654 1257 aaPredicted RBP32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms