RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 NLRP10Q86W26 655 aa32.29■■■□□ 2.76
SNAPC3-203ENST00000421710 TSPYL6Q8N831 410 aa32.29■■■□□ 2.76
SNAPC3-203ENST00000421710 C21orf2O43822 256 aa32.28■■■□□ 2.76
SNAPC3-203ENST00000421710 STK31Q9BXU1 1019 aa32.28■■■□□ 2.76
SNAPC3-203ENST00000421710 SLX4Q8IY92 1834 aa32.28■■■□□ 2.76
SNAPC3-203ENST00000421710 SBF1O95248 1867 aa32.27■■■□□ 2.76
SNAPC3-203ENST00000421710 GPBP1L1Q9HC44 474 aaPredicted RBP32.27■■■□□ 2.76
SNAPC3-203ENST00000421710 RNF181Q9P0P0 153 aa32.27■■■□□ 2.76
SNAPC3-203ENST00000421710 RIC3Q7Z5B4 369 aa32.26■■■□□ 2.75
SNAPC3-203ENST00000421710 RPGRQ92834 1020 aaKnown RBP32.26■■■□□ 2.75
SNAPC3-203ENST00000421710 MYH16Q9H6N6 1097 aa32.26■■■□□ 2.75
SNAPC3-203ENST00000421710 DDX58O95786 925 aaKnown RBP32.25■■■□□ 2.75
SNAPC3-203ENST00000421710 LMNB1P20700 586 aa32.25■■■□□ 2.75
SNAPC3-203ENST00000421710 RASSF7Q02833 373 aa32.25■■■□□ 2.75
SNAPC3-203ENST00000421710 NLRP3Q96P20 1036 aa32.25■■■□□ 2.75
SNAPC3-203ENST00000421710 ZNF219Q9P2Y4 722 aaPredicted RBP32.25■■■□□ 2.75
SNAPC3-203ENST00000421710 SLC10A5Q5PT55 438 aa32.24■■■□□ 2.75
SNAPC3-203ENST00000421710 PHAXQ9H814 394 aaKnown RBP32.24■■■□□ 2.75
SNAPC3-203ENST00000421710 TRMT112Q9UI30 125 aaKnown RBP32.24■■■□□ 2.75
SNAPC3-203ENST00000421710 FER1L6Q2WGJ9 1857 aa32.23■■■□□ 2.75
SNAPC3-203ENST00000421710 ISCA1Q9BUE6 129 aa32.23■■■□□ 2.75
SNAPC3-203ENST00000421710 SH3TC1Q8TE82 1336 aa32.23■■■□□ 2.75
SNAPC3-203ENST00000421710 ZC3H4Q9UPT8 1303 aaKnown RBP32.23■■■□□ 2.75
SNAPC3-203ENST00000421710 NFKBIEO00221 500 aa32.22■■■□□ 2.75
SNAPC3-203ENST00000421710 HOXA10P31260 410 aaPredicted RBP32.21■■■□□ 2.75
SNAPC3-203ENST00000421710 ZNF526Q8TF50 670 aaPredicted RBP32.21■■■□□ 2.75
SNAPC3-203ENST00000421710 LTBP3Q9NS15 1303 aa32.21■■■□□ 2.75
SNAPC3-203ENST00000421710 TRIM28Q13263 835 aaKnown RBP32.2■■■□□ 2.75
SNAPC3-203ENST00000421710 CCDC93Q567U6 631 aa32.2■■■□□ 2.75
SNAPC3-203ENST00000421710 RBM17Q96I25 401 aaKnown RBP32.2■■■□□ 2.75
SNAPC3-203ENST00000421710 TAOK3Q9H2K8 898 aa32.2■■■□□ 2.75
SNAPC3-203ENST00000421710 C7orf43Q8WVR3 580 aa32.18■■■□□ 2.74
SNAPC3-203ENST00000421710 ATP5J2-PTCD1G3V325 749 aa32.17■■■□□ 2.74
SNAPC3-203ENST00000421710 CRAMP1Q96RY5 1269 aa32.17■■■□□ 2.74
SNAPC3-203ENST00000421710 ZNF521Q96K83 1311 aa32.17■■■□□ 2.74
SNAPC3-203ENST00000421710 CACNA1FO60840 1977 aa32.16■■■□□ 2.74
SNAPC3-203ENST00000421710 EXOSC9Q06265 439 aaKnown RBP32.16■■■□□ 2.74
SNAPC3-203ENST00000421710 CCDC88AQ3V6T2 1871 aa32.16■■■□□ 2.74
SNAPC3-203ENST00000421710 RTKN2Q8IZC4 609 aa32.15■■■□□ 2.74
SNAPC3-203ENST00000421710 SPINK5Q9NQ38 1064 aaPredicted RBP32.15■■■□□ 2.74
SNAPC3-203ENST00000421710 SLC4A2P04920 1241 aa32.14■■■□□ 2.74
SNAPC3-203ENST00000421710 CC2D2BQ6DHV5 1058 aa32.14■■■□□ 2.74
SNAPC3-203ENST00000421710 MYD88Q99836 296 aa32.14■■■□□ 2.74
SNAPC3-203ENST00000421710 TIAM2Q8IVF5 1701 aa32.14■■■□□ 2.74
SNAPC3-203ENST00000421710 VAMP4O75379 141 aa32.13■■■□□ 2.73
SNAPC3-203ENST00000421710 HCLS1P14317 486 aaPredicted RBP32.13■■■□□ 2.73
SNAPC3-203ENST00000421710 KSR2Q6VAB6 950 aa32.13■■■□□ 2.73
SNAPC3-203ENST00000421710 C3orf67Q6ZVT6 689 aa32.13■■■□□ 2.73
SNAPC3-203ENST00000421710 KDM2BQ8NHM5 1336 aa32.13■■■□□ 2.73
SNAPC3-203ENST00000421710 METTL22Q9BUU2 404 aaPredicted RBP32.13■■■□□ 2.73
SNAPC3-203ENST00000421710 LAMB2P55268 1798 aa32.12■■■□□ 2.73
SNAPC3-203ENST00000421710 TCERG1O14776 1098 aaKnown RBP32.12■■■□□ 2.73
SNAPC3-203ENST00000421710 HSP90B1P14625 803 aaKnown RBP32.12■■■□□ 2.73
SNAPC3-203ENST00000421710 GRIPAP1Q4V328 841 aa32.12■■■□□ 2.73
SNAPC3-203ENST00000421710 CCDC191Q8NCU4 936 aa32.12■■■□□ 2.73
SNAPC3-203ENST00000421710 DICER1Q9UPY3 1922 aaKnown RBP32.12■■■□□ 2.73
SNAPC3-203ENST00000421710 PRELPP51888 382 aa32.11■■■□□ 2.73
SNAPC3-203ENST00000421710 DIEXFQ68CQ4 756 aaKnown RBP32.11■■■□□ 2.73
SNAPC3-203ENST00000421710 MAP3K2Q9Y2U5 619 aa32.11■■■□□ 2.73
SNAPC3-203ENST00000421710 FKBP4Q02790 459 aaKnown RBP eCLIP32.1■■■□□ 2.737e-6■■■■□ 25.4
SNAPC3-203ENST00000421710 NEXNQ0ZGT2 675 aa32.1■■■□□ 2.73
SNAPC3-203ENST00000421710 SYNE4Q8N205 404 aa32.1■■■□□ 2.73
SNAPC3-203ENST00000421710 FAM89AQ96GI7 184 aa32.1■■■□□ 2.73
SNAPC3-203ENST00000421710 TMX4Q9H1E5 349 aaPredicted RBP32.1■■■□□ 2.73
SNAPC3-203ENST00000421710 DDX60Q8IY21 1712 aaKnown RBP32.09■■■□□ 2.73
SNAPC3-203ENST00000421710 PI4KAP2A4QPH2 592 aa32.09■■■□□ 2.73
SNAPC3-203ENST00000421710 PPEF1O14829 653 aaPredicted RBP32.09■■■□□ 2.73
SNAPC3-203ENST00000421710 PI4KAP1Q8N8J0 262 aa32.09■■■□□ 2.73
SNAPC3-203ENST00000421710 CWC25Q9NXE8 425 aaPredicted RBP32.09■■■□□ 2.73
SNAPC3-203ENST00000421710 C1QTNF8P60827 252 aa32.08■■■□□ 2.73
SNAPC3-203ENST00000421710 FLIIQ13045 1269 aa32.08■■■□□ 2.73
SNAPC3-203ENST00000421710 DDX46Q7L014 1031 aaKnown RBP32.08■■■□□ 2.73
SNAPC3-203ENST00000421710 ZBTB38Q8NAP3 1195 aaPredicted RBP32.08■■■□□ 2.73
SNAPC3-203ENST00000421710 ABCC4O15439 1325 aa32.07■■■□□ 2.72
SNAPC3-203ENST00000421710 E9PSI1 815 aa32.07■■■□□ 2.72
SNAPC3-203ENST00000421710 ZNF428Q96B54 188 aa32.06■■■□□ 2.72
SNAPC3-203ENST00000421710 IRS4O14654 1257 aaPredicted RBP32.05■■■□□ 2.72
SNAPC3-203ENST00000421710 OLFM4Q6UX06 510 aa32.05■■■□□ 2.72
SNAPC3-203ENST00000421710 G2E3Q7L622 706 aa32.05■■■□□ 2.72
SNAPC3-203ENST00000421710 PSMD1Q99460 953 aa32.05■■■□□ 2.72
SNAPC3-203ENST00000421710 BBOX1O75936 387 aa32.04■■■□□ 2.72
SNAPC3-203ENST00000421710 PCCAP05165 728 aaPredicted RBP32.04■■■□□ 2.72
SNAPC3-203ENST00000421710 FKBP5Q13451 457 aaPredicted RBP32.04■■■□□ 2.72
SNAPC3-203ENST00000421710 GLTPD2A6NH11 291 aa32.03■■■□□ 2.72
SNAPC3-203ENST00000421710 SF3B3Q15393 1217 aaKnown RBP32.03■■■□□ 2.72
SNAPC3-203ENST00000421710 RTL5Q5HYW3 569 aaPredicted RBP32.03■■■□□ 2.72
SNAPC3-203ENST00000421710 SNED1Q8TER0 1413 aa32.02■■■□□ 2.72
SNAPC3-203ENST00000421710 KIF3CO14782 793 aa32.02■■■□□ 2.72
SNAPC3-203ENST00000421710 GRAPQ13588 217 aa32.02■■■□□ 2.72
SNAPC3-203ENST00000421710 DPY19L2Q6NUT2 758 aa32.02■■■□□ 2.72
SNAPC3-203ENST00000421710 GRAPLQ8TC17 118 aaPredicted RBP32.02■■■□□ 2.72
SNAPC3-203ENST00000421710 ATP6V0A2Q9Y487 856 aa32.02■■■□□ 2.72
SNAPC3-203ENST00000421710 TMC4Q7Z404 712 aa32.01■■■□□ 2.71
SNAPC3-203ENST00000421710 NMRK2Q9NPI5 230 aa32.01■■■□□ 2.71
SNAPC3-203ENST00000421710 ZNF277Q9NRM2 450 aaPredicted RBP32■■■□□ 2.71
SNAPC3-203ENST00000421710 IGKV5-2P06315 115 aa31.99■■■□□ 2.71
SNAPC3-203ENST00000421710 IARSP41252 1262 aaKnown RBP31.98■■■□□ 2.71
SNAPC3-203ENST00000421710 DNAAF4Q8WXU2 420 aa31.98■■■□□ 2.71
SNAPC3-203ENST00000421710 CDHR2Q9BYE9 1310 aa31.98■■■□□ 2.71
SNAPC3-203ENST00000421710 SLFN5Q08AF3 891 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms