RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 GPTP24298 496 aa27.56■■■□□ 2
CPNE1-211ENST00000420363 TWISTNBQ3B726 338 aaPredicted RBP27.56■■■□□ 2
CPNE1-211ENST00000420363 CACNA1FO60840 1977 aa27.55■■■□□ 2
CPNE1-211ENST00000420363 GLTPD2A6NH11 291 aa27.55■■■□□ 2
CPNE1-211ENST00000420363 NTSR2O95665 410 aa27.55■■■□□ 2
CPNE1-211ENST00000420363 PRELPP51888 382 aa27.55■■■□□ 2
CPNE1-211ENST00000420363 ZNF219Q9P2Y4 722 aaPredicted RBP27.55■■■□□ 2
CPNE1-211ENST00000420363 ABCC12Q96J65 1359 aa27.55■■■□□ 2
CPNE1-211ENST00000420363 NFKBIEO00221 500 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 C21orf2O43822 256 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 SRGNP10124 158 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 STYK1Q6J9G0 422 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 ANKRD13DQ6ZTN6 518 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 PPP1R42Q7Z4L9 355 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 MYH16Q9H6N6 1097 aa27.54■■■□□ 2
CPNE1-211ENST00000420363 FAM177BA6PVY3 158 aa27.53■■■□□ 2
CPNE1-211ENST00000420363 VEGFAP15692 232 aaPredicted RBP27.53■■■□□ 2
CPNE1-211ENST00000420363 GTF2E1P29083 439 aaPredicted RBP27.53■■■□□ 2
CPNE1-211ENST00000420363 GOLGA2Q08379 1002 aa27.53■■■□□ 2
CPNE1-211ENST00000420363 TCIRG1Q13488 830 aa27.53■■■□□ 2
CPNE1-211ENST00000420363 SUSD4Q5VX71 490 aa27.53■■■□□ 2
CPNE1-211ENST00000420363 SMC1BQ8NDV3 1235 aa27.53■■■□□ 2
CPNE1-211ENST00000420363 MASTLQ96GX5 879 aa27.52■■■□□ 2
CPNE1-211ENST00000420363 CACNA1SQ13698 1873 aa27.52■■■□□ 2
CPNE1-211ENST00000420363 CNKSR1Q969H4 720 aa27.51■■□□□ 1.99
CPNE1-211ENST00000420363 STK31Q9BXU1 1019 aa27.51■■□□□ 1.99
CPNE1-211ENST00000420363 SPINK5Q9NQ38 1064 aaPredicted RBP27.51■■□□□ 1.99
CPNE1-211ENST00000420363 HTRA3P83110 453 aa27.5■■□□□ 1.99
CPNE1-211ENST00000420363 DPY19L2Q6NUT2 758 aa27.5■■□□□ 1.99
CPNE1-211ENST00000420363 NLRP10Q86W26 655 aa27.5■■□□□ 1.99
CPNE1-211ENST00000420363 NPR1P16066 1061 aa27.49■■□□□ 1.99
CPNE1-211ENST00000420363 CRY2Q49AN0 593 aa27.49■■□□□ 1.99
CPNE1-211ENST00000420363 ERFEQ4G0M1 354 aa27.49■■□□□ 1.99
CPNE1-211ENST00000420363 NUTM1Q86Y26 1132 aa27.49■■□□□ 1.99
CPNE1-211ENST00000420363 UTP14AQ9BVJ6 771 aaKnown RBP27.49■■□□□ 1.99
CPNE1-211ENST00000420363 PHAXQ9H814 394 aaKnown RBP27.49■■□□□ 1.99
CPNE1-211ENST00000420363 SLX4Q8IY92 1834 aa27.48■■□□□ 1.99
CPNE1-211ENST00000420363 DDX58O95786 925 aaKnown RBP27.47■■□□□ 1.99
CPNE1-211ENST00000420363 EXOSC9Q06265 439 aaKnown RBP27.47■■□□□ 1.99
CPNE1-211ENST00000420363 ISCA1Q9BUE6 129 aa27.47■■□□□ 1.99
CPNE1-211ENST00000420363 FER1L6Q2WGJ9 1857 aa27.47■■□□□ 1.99
CPNE1-211ENST00000420363 LAMB2P55268 1798 aa27.46■■□□□ 1.99
CPNE1-211ENST00000420363 TRIM28Q13263 835 aaKnown RBP27.46■■□□□ 1.99
CPNE1-211ENST00000420363 KLRG1Q96E93 195 aa27.46■■□□□ 1.99
CPNE1-211ENST00000420363 SOGA3Q5TF21 947 aa27.45■■□□□ 1.98
CPNE1-211ENST00000420363 PRPF40BQ6NWY9 871 aaKnown RBP27.45■■□□□ 1.98
CPNE1-211ENST00000420363 TAOK3Q9H2K8 898 aa27.45■■□□□ 1.98
CPNE1-211ENST00000420363 VAMP4O75379 141 aa27.44■■□□□ 1.98
CPNE1-211ENST00000420363 SLC10A5Q5PT55 438 aa27.44■■□□□ 1.98
CPNE1-211ENST00000420363 RIC3Q7Z5B4 369 aa27.44■■□□□ 1.98
CPNE1-211ENST00000420363 DDX60Q8IY21 1712 aaKnown RBP27.44■■□□□ 1.98
CPNE1-211ENST00000420363 WDR90Q96KV7 1748 aa27.44■■□□□ 1.98
CPNE1-211ENST00000420363 SH3TC1Q8TE82 1336 aa27.43■■□□□ 1.98
CPNE1-211ENST00000420363 E9PSI1 815 aa27.43■■□□□ 1.98
CPNE1-211ENST00000420363 LTBP3Q9NS15 1303 aa27.42■■□□□ 1.98
CPNE1-211ENST00000420363 MIER1Q8N108 512 aa27.42■■□□□ 1.98
CPNE1-211ENST00000420363 CCDC88AQ3V6T2 1871 aa27.42■■□□□ 1.98
CPNE1-211ENST00000420363 ALDH1B1P30837 517 aa27.41■■□□□ 1.98
CPNE1-211ENST00000420363 TRMT112Q9UI30 125 aaKnown RBP27.41■■□□□ 1.98
CPNE1-211ENST00000420363 HOXA10P31260 410 aaPredicted RBP27.4■■□□□ 1.98
CPNE1-211ENST00000420363 POTECB2RU33 542 aa27.39■■□□□ 1.98
CPNE1-211ENST00000420363 SLC4A2P04920 1241 aa27.39■■□□□ 1.98
CPNE1-211ENST00000420363 KSR2Q6VAB6 950 aa27.39■■□□□ 1.98
CPNE1-211ENST00000420363 RPGRQ92834 1020 aaKnown RBP27.39■■□□□ 1.98
CPNE1-211ENST00000420363 NLRP3Q96P20 1036 aa27.39■■□□□ 1.98
CPNE1-211ENST00000420363 METTL22Q9BUU2 404 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-211ENST00000420363 ATP5J2-PTCD1G3V325 749 aa27.38■■□□□ 1.97
CPNE1-211ENST00000420363 JMYQ8N9B5 988 aa27.38■■□□□ 1.97
CPNE1-211ENST00000420363 FLIIQ13045 1269 aa27.37■■□□□ 1.97
CPNE1-211ENST00000420363 TIAM2Q8IVF5 1701 aa27.37■■□□□ 1.97
CPNE1-211ENST00000420363 CCDC191Q8NCU4 936 aa27.37■■□□□ 1.97
CPNE1-211ENST00000420363 C7orf43Q8WVR3 580 aa27.37■■□□□ 1.97
CPNE1-211ENST00000420363 MAP3K2Q9Y2U5 619 aa27.37■■□□□ 1.97
CPNE1-211ENST00000420363 TCERG1O14776 1098 aaKnown RBP27.36■■□□□ 1.97
CPNE1-211ENST00000420363 SLFN5Q08AF3 891 aa27.36■■□□□ 1.97
CPNE1-211ENST00000420363 CRAMP1Q96RY5 1269 aa27.36■■□□□ 1.97
CPNE1-211ENST00000420363 MYD88Q99836 296 aa27.36■■□□□ 1.97
CPNE1-211ENST00000420363 DICER1Q9UPY3 1922 aaKnown RBP27.35■■□□□ 1.97
CPNE1-211ENST00000420363 PI4KAP2A4QPH2 592 aa27.35■■□□□ 1.97
CPNE1-211ENST00000420363 CCDC93Q567U6 631 aa27.35■■□□□ 1.97
CPNE1-211ENST00000420363 C3orf67Q6ZVT6 689 aa27.35■■□□□ 1.97
CPNE1-211ENST00000420363 G2E3Q7L622 706 aa27.35■■□□□ 1.97
CPNE1-211ENST00000420363 PI4KAP1Q8N8J0 262 aa27.35■■□□□ 1.97
CPNE1-211ENST00000420363 RBM17Q96I25 401 aaKnown RBP27.35■■□□□ 1.97
CPNE1-211ENST00000420363 DDNO94850 711 aaPredicted RBP27.34■■□□□ 1.97
CPNE1-211ENST00000420363 SNED1Q8TER0 1413 aa27.33■■□□□ 1.97
CPNE1-211ENST00000420363 NEXNQ0ZGT2 675 aa27.33■■□□□ 1.97
CPNE1-211ENST00000420363 ZBTB38Q8NAP3 1195 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-211ENST00000420363 CWC25Q9NXE8 425 aaPredicted RBP27.33■■□□□ 1.97
CPNE1-211ENST00000420363 HCLS1P14317 486 aaPredicted RBP27.32■■□□□ 1.96
CPNE1-211ENST00000420363 HSP90B1P14625 803 aaKnown RBP27.32■■□□□ 1.96
CPNE1-211ENST00000420363 SYNE4Q8N205 404 aa27.32■■□□□ 1.96
CPNE1-211ENST00000420363 FKBP5Q13451 457 aaPredicted RBP27.31■■□□□ 1.96
CPNE1-211ENST00000420363 CC2D2BQ6DHV5 1058 aa27.31■■□□□ 1.96
CPNE1-211ENST00000420363 TRMT2AQ8IZ69 625 aaKnown RBP27.31■■□□□ 1.96
CPNE1-211ENST00000420363 ZNF428Q96B54 188 aa27.31■■□□□ 1.96
CPNE1-211ENST00000420363 FAM89AQ96GI7 184 aa27.31■■□□□ 1.96
CPNE1-211ENST00000420363 PCCAP05165 728 aaPredicted RBP27.3■■□□□ 1.96
CPNE1-211ENST00000420363 RTKN2Q8IZC4 609 aa27.3■■□□□ 1.96
CPNE1-211ENST00000420363 IGKV5-2P06315 115 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms