RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 EYA1Q99502 592 aa19.19■□□□□ 0.66
CRTC3-202ENST00000420329 NAPBQ9H115 298 aa19.19■□□□□ 0.66
CRTC3-202ENST00000420329 DNAJC25Q9H1X3 360 aa19.19■□□□□ 0.66
CRTC3-202ENST00000420329 TYRO3Q06418 890 aa19.19■□□□□ 0.66
CRTC3-202ENST00000420329 CNNM3Q8NE01 707 aa19.19■□□□□ 0.66
CRTC3-202ENST00000420329 RAI14Q9P0K7 980 aa19.19■□□□□ 0.66
CRTC3-202ENST00000420329 CPA1P15085 419 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 CDR1P51861 262 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 IFIT5Q13325 482 aaKnown RBP19.18■□□□□ 0.66
CRTC3-202ENST00000420329 KSR2Q6VAB6 950 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 RAB11FIP4Q86YS3 637 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 ZBTB3Q9H5J0 574 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 PAXBP1Q9Y5B6 917 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 LMBRD1Q9NUN5 540 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 CHL1O00533 1208 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 SNW1Q13573 536 aaKnown RBP19.18■□□□□ 0.66
CRTC3-202ENST00000420329 PIBF1Q8WXW3 757 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 ZHX1Q9UKY1 873 aaPredicted RBP19.18■□□□□ 0.66
CRTC3-202ENST00000420329 KDM5AP29375 1690 aaKnown RBP19.18■□□□□ 0.66
CRTC3-202ENST00000420329 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
CRTC3-202ENST00000420329 ATP7AQ04656 1500 aa19.17■□□□□ 0.66
CRTC3-202ENST00000420329 ISM2Q6H9L7 571 aa19.17■□□□□ 0.66
CRTC3-202ENST00000420329 DEF6Q9H4E7 631 aa19.17■□□□□ 0.66
CRTC3-202ENST00000420329 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
CRTC3-202ENST00000420329 ABCF2Q9UG63 623 aa19.17■□□□□ 0.66
CRTC3-202ENST00000420329 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
CRTC3-202ENST00000420329 CREB3L3Q68CJ9 461 aa19.17■□□□□ 0.66
CRTC3-202ENST00000420329 TNRQ92752 1358 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 NPHP3Q7Z494 1330 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 Q6ZUG5 572 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 H0YHG0 523 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 SKILP12757 684 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
CRTC3-202ENST00000420329 ANKRD24Q8TF21 1146 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 MAP3K19Q56UN5 1328 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 STARD3NLO95772 234 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 GOLGA8AA7E2F4 631 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 CCDC102AQ96A19 550 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 SLC12A7Q9Y666 1083 aa19.16■□□□□ 0.66
CRTC3-202ENST00000420329 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
CRTC3-202ENST00000420329 SBNO2Q9Y2G9 1366 aa19.15■□□□□ 0.66
CRTC3-202ENST00000420329 TCEAL9Q9UHQ7 104 aa19.15■□□□□ 0.66
CRTC3-202ENST00000420329 CCDC171Q6TFL3 1326 aa19.15■□□□□ 0.66
CRTC3-202ENST00000420329 CASQ1P31415 396 aa19.15■□□□□ 0.66
CRTC3-202ENST00000420329 ABCC4O15439 1325 aa19.14■□□□□ 0.66
CRTC3-202ENST00000420329 CCDC196A0A1B0GTZ2 297 aa19.14■□□□□ 0.66
CRTC3-202ENST00000420329 MINDY4BA8MYZ0 360 aa19.14■□□□□ 0.66
CRTC3-202ENST00000420329 CWF19L2Q2TBE0 894 aaKnown RBP19.14■□□□□ 0.66
CRTC3-202ENST00000420329 COPS6Q7L5N1 327 aa19.14■□□□□ 0.66
CRTC3-202ENST00000420329 LINS1Q8NG48 757 aa19.14■□□□□ 0.66
CRTC3-202ENST00000420329 IFIT3O14879 490 aaKnown RBP19.14■□□□□ 0.65
CRTC3-202ENST00000420329 PTGS1P23219 599 aa19.14■□□□□ 0.65
CRTC3-202ENST00000420329 CCDC181Q5TID7 509 aa19.14■□□□□ 0.65
CRTC3-202ENST00000420329 RUFY3Q7L099 469 aa19.14■□□□□ 0.65
CRTC3-202ENST00000420329 MICU3Q86XE3 530 aa19.14■□□□□ 0.65
CRTC3-202ENST00000420329 CWC25Q9NXE8 425 aaPredicted RBP19.14■□□□□ 0.65
CRTC3-202ENST00000420329 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 PATL2C9JE40 543 aaKnown RBP19.13■□□□□ 0.65
CRTC3-202ENST00000420329 MCMDC2Q4G0Z9 681 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 KIF5CO60282 957 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 KIF4BQ2VIQ3 1234 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 IFNL2Q8IZJ0 200 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 CEP170Q5SW79 1584 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 ERVK-7P63135 1459 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 SNRPA1P09661 255 aaKnown RBP19.13■□□□□ 0.65
CRTC3-202ENST00000420329 IARSP41252 1262 aaKnown RBP19.13■□□□□ 0.65
CRTC3-202ENST00000420329 EIF5P55010 431 aaKnown RBP19.13■□□□□ 0.65
CRTC3-202ENST00000420329 CCDC144CPQ8IYA2 1237 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 CCDC150Q8NCX0 1101 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 IGHMBP2P38935 993 aaKnown RBP19.13■□□□□ 0.65
CRTC3-202ENST00000420329 TMX1Q9H3N1 280 aa19.13■□□□□ 0.65
CRTC3-202ENST00000420329 KLF18A0A0U1RQI7 1052 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 AKAP4Q5JQC9 854 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
CRTC3-202ENST00000420329 PNMA6EA0A0J9YXQ4 647 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 SLC39A6Q13433 755 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 NCOA7Q8NI08 942 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 MRPS27Q92552 414 aaKnown RBP19.12■□□□□ 0.65
CRTC3-202ENST00000420329 SSRP1Q08945 709 aaKnown RBP19.12■□□□□ 0.65
CRTC3-202ENST00000420329 MAP3K12Q12852 859 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 LUZP1Q86V48 1076 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 CPLX3Q8WVH0 158 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 TANGO6Q9C0B7 1094 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 SYNMO15061 1565 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 ATP10AO60312 1499 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 TMEM63CQ9P1W3 806 aa19.12■□□□□ 0.65
CRTC3-202ENST00000420329 TAF3Q5VWG9 929 aa19.11■□□□□ 0.65
CRTC3-202ENST00000420329 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
CRTC3-202ENST00000420329 CCDC43Q96MW1 224 aaKnown RBP19.11■□□□□ 0.65
CRTC3-202ENST00000420329 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
CRTC3-202ENST00000420329 POLR3GO15318 223 aaPredicted RBP19.11■□□□□ 0.65
CRTC3-202ENST00000420329 KRT18P05783 430 aaKnown RBP19.11■□□□□ 0.65
CRTC3-202ENST00000420329 KIAA1328Q86T90 577 aa19.11■□□□□ 0.65
CRTC3-202ENST00000420329 AOPEPQ8N6M6 819 aa19.11■□□□□ 0.65
CRTC3-202ENST00000420329 FAM193AP78312 1265 aa19.11■□□□□ 0.65
CRTC3-202ENST00000420329 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
CRTC3-202ENST00000420329 METAP2P50579 478 aaKnown RBP eCLIP19.11■□□□□ 0.65
CRTC3-202ENST00000420329 SOGA3Q5TF21 947 aa19.1■□□□□ 0.65
CRTC3-202ENST00000420329 GAS2L3Q86XJ1 694 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms