RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.32
TMEM248-203ENST00000418375 NYXQ9GZU5 481 aa17.08■□□□□ 0.32
TMEM248-203ENST00000418375 CEP350Q5VT06 3117 aa17.07■□□□□ 0.32
TMEM248-203ENST00000418375 ZC3H4Q9UPT8 1303 aaKnown RBP17.07■□□□□ 0.32
TMEM248-203ENST00000418375 GTF2E1P29083 439 aaPredicted RBP17.07■□□□□ 0.32
TMEM248-203ENST00000418375 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
TMEM248-203ENST00000418375 ZNF428Q96B54 188 aa17.07■□□□□ 0.32
TMEM248-203ENST00000418375 FAM177BA6PVY3 158 aa17.06■□□□□ 0.32
TMEM248-203ENST00000418375 NFKBIEO00221 500 aa17.06■□□□□ 0.32
TMEM248-203ENST00000418375 C21orf2O43822 256 aa17.06■□□□□ 0.32
TMEM248-203ENST00000418375 CT47B1P0C2W7 299 aaPredicted RBP17.06■□□□□ 0.32
TMEM248-203ENST00000418375 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
TMEM248-203ENST00000418375 CNKSR1Q969H4 720 aa17.06■□□□□ 0.32
TMEM248-203ENST00000418375 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
TMEM248-203ENST00000418375 DLEC1Q9Y238 1755 aa17.06■□□□□ 0.32
TMEM248-203ENST00000418375 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
TMEM248-203ENST00000418375 UBN2Q6ZU65 1347 aa17.05■□□□□ 0.32
TMEM248-203ENST00000418375 SRGNP10124 158 aa17.05■□□□□ 0.32
TMEM248-203ENST00000418375 PRELPP51888 382 aa17.05■□□□□ 0.32
TMEM248-203ENST00000418375 FLIIQ13045 1269 aa17.05■□□□□ 0.32
TMEM248-203ENST00000418375 STYK1Q6J9G0 422 aa17.05■□□□□ 0.32
TMEM248-203ENST00000418375 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
TMEM248-203ENST00000418375 SUSD4Q5VX71 490 aa17.04■□□□□ 0.32
TMEM248-203ENST00000418375 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
TMEM248-203ENST00000418375 G2E3Q7L622 706 aa17.04■□□□□ 0.32
TMEM248-203ENST00000418375 RBM46Q8TBY0 533 aaKnown RBP17.04■□□□□ 0.32
TMEM248-203ENST00000418375 MASTLQ96GX5 879 aa17.04■□□□□ 0.32
TMEM248-203ENST00000418375 UTP14AQ9BVJ6 771 aaKnown RBP17.04■□□□□ 0.32
TMEM248-203ENST00000418375 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
TMEM248-203ENST00000418375 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
TMEM248-203ENST00000418375 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
TMEM248-203ENST00000418375 NLRP10Q86W26 655 aa17.03■□□□□ 0.32
TMEM248-203ENST00000418375 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
TMEM248-203ENST00000418375 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
TMEM248-203ENST00000418375 NUP98P52948 1817 aa17.03■□□□□ 0.32
TMEM248-203ENST00000418375 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.32
TMEM248-203ENST00000418375 GLTPD2A6NH11 291 aa17.02■□□□□ 0.32
TMEM248-203ENST00000418375 NTSR2O95665 410 aa17.02■□□□□ 0.32
TMEM248-203ENST00000418375 APLP1P51693 650 aa17.02■□□□□ 0.32
TMEM248-203ENST00000418375 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
TMEM248-203ENST00000418375 MYD88Q99836 296 aa17.02■□□□□ 0.32
TMEM248-203ENST00000418375 ISCA1Q9BUE6 129 aa17.02■□□□□ 0.32
TMEM248-203ENST00000418375 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
TMEM248-203ENST00000418375 ATP5J2-PTCD1G3V325 749 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 NPR1P16066 1061 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 TRIM28Q13263 835 aaKnown RBP17.01■□□□□ 0.31
TMEM248-203ENST00000418375 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
TMEM248-203ENST00000418375 SBF1O95248 1867 aa17.01■□□□□ 0.31
TMEM248-203ENST00000418375 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
TMEM248-203ENST00000418375 KLRG2A4D1S0 409 aaPredicted RBP17■□□□□ 0.31
TMEM248-203ENST00000418375 ERFEQ4G0M1 354 aa17■□□□□ 0.31
TMEM248-203ENST00000418375 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
TMEM248-203ENST00000418375 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
TMEM248-203ENST00000418375 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
TMEM248-203ENST00000418375 FSTL1Q12841 308 aa16.99■□□□□ 0.31
TMEM248-203ENST00000418375 DPY19L2Q6NUT2 758 aa16.99■□□□□ 0.31
TMEM248-203ENST00000418375 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
TMEM248-203ENST00000418375 CCDC191Q8NCU4 936 aa16.99■□□□□ 0.31
TMEM248-203ENST00000418375 SMC4Q9NTJ3 1288 aa16.99■□□□□ 0.31
TMEM248-203ENST00000418375 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
TMEM248-203ENST00000418375 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
TMEM248-203ENST00000418375 DNAAF4Q8WXU2 420 aa16.98■□□□□ 0.31
TMEM248-203ENST00000418375 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
TMEM248-203ENST00000418375 ABCC12Q96J65 1359 aa16.98■□□□□ 0.31
TMEM248-203ENST00000418375 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
TMEM248-203ENST00000418375 CCDC93Q567U6 631 aa16.97■□□□□ 0.31
TMEM248-203ENST00000418375 C7orf43Q8WVR3 580 aa16.97■□□□□ 0.31
TMEM248-203ENST00000418375 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
TMEM248-203ENST00000418375 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
TMEM248-203ENST00000418375 PTPRCP08575 1304 aa16.96■□□□□ 0.31
TMEM248-203ENST00000418375 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
TMEM248-203ENST00000418375 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
TMEM248-203ENST00000418375 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
TMEM248-203ENST00000418375 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
TMEM248-203ENST00000418375 NLRP3Q96P20 1036 aa16.96■□□□□ 0.31
TMEM248-203ENST00000418375 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
TMEM248-203ENST00000418375 ANKRD36CQ5JPF3 1778 aa16.96■□□□□ 0.31
TMEM248-203ENST00000418375 IGKV5-2P06315 115 aa16.95■□□□□ 0.3
TMEM248-203ENST00000418375 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
TMEM248-203ENST00000418375 RARSP54136 660 aaKnown RBP16.95■□□□□ 0.3
TMEM248-203ENST00000418375 ZBTB38Q8NAP3 1195 aaPredicted RBP16.95■□□□□ 0.3
TMEM248-203ENST00000418375 FAM89AQ96GI7 184 aa16.95■□□□□ 0.3
TMEM248-203ENST00000418375 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
TMEM248-203ENST00000418375 NEURL1BA8MQ27 555 aa16.94■□□□□ 0.3
TMEM248-203ENST00000418375 F6X3S4 739 aa16.94■□□□□ 0.3
TMEM248-203ENST00000418375 LINS1Q8NG48 757 aa16.94■□□□□ 0.3
TMEM248-203ENST00000418375 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
TMEM248-203ENST00000418375 PCCAP05165 728 aaPredicted RBP16.93■□□□□ 0.3
TMEM248-203ENST00000418375 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
TMEM248-203ENST00000418375 BRPF1P55201 1214 aaPredicted RBP16.93■□□□□ 0.3
TMEM248-203ENST00000418375 CWF19L2Q2TBE0 894 aaKnown RBP16.93■□□□□ 0.3
TMEM248-203ENST00000418375 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
TMEM248-203ENST00000418375 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
TMEM248-203ENST00000418375 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
TMEM248-203ENST00000418375 TIAM2Q8IVF5 1701 aa16.93■□□□□ 0.3
TMEM248-203ENST00000418375 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms