RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 NLRP10Q86W26 655 aa18.25■□□□□ 0.51
SLC13A3-205ENST00000417157 RPGRQ92834 1020 aaKnown RBP18.25■□□□□ 0.51
SLC13A3-205ENST00000417157 GOLGB1Q14789 3259 aaKnown RBP18.24■□□□□ 0.51
SLC13A3-205ENST00000417157 CRY2Q49AN0 593 aa18.24■□□□□ 0.51
SLC13A3-205ENST00000417157 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
SLC13A3-205ENST00000417157 NLRP3Q96P20 1036 aa18.23■□□□□ 0.51
SLC13A3-205ENST00000417157 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
SLC13A3-205ENST00000417157 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
SLC13A3-205ENST00000417157 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
SLC13A3-205ENST00000417157 TNRC6CQ9HCJ0 1690 aaKnown RBP18.22■□□□□ 0.51
SLC13A3-205ENST00000417157 C21orf2O43822 256 aa18.22■□□□□ 0.51
SLC13A3-205ENST00000417157 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
SLC13A3-205ENST00000417157 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
SLC13A3-205ENST00000417157 HSP90B1P14625 803 aaKnown RBP18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 LMNB1P20700 586 aa18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 TRIM28Q13263 835 aaKnown RBP18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 SLC10A5Q5PT55 438 aa18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 C9orf131Q5VYM1 1079 aa18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 RBM17Q96I25 401 aaKnown RBP18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 RNF181Q9P0P0 153 aa18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 ZC3H4Q9UPT8 1303 aaKnown RBP18.21■□□□□ 0.51
SLC13A3-205ENST00000417157 E9PSI1 815 aa18.2■□□□□ 0.5
SLC13A3-205ENST00000417157 HOXA10P31260 410 aaPredicted RBP18.2■□□□□ 0.5
SLC13A3-205ENST00000417157 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
SLC13A3-205ENST00000417157 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
SLC13A3-205ENST00000417157 GPBP1L1Q9HC44 474 aaPredicted RBP18.2■□□□□ 0.5
SLC13A3-205ENST00000417157 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
SLC13A3-205ENST00000417157 ATP5J2-PTCD1G3V325 749 aa18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 VAMP4O75379 141 aa18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 RASSF7Q02833 373 aa18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 KSR2Q6VAB6 950 aa18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 SPINK5Q9NQ38 1064 aaPredicted RBP18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
SLC13A3-205ENST00000417157 CC2D2BQ6DHV5 1058 aa18.18■□□□□ 0.5
SLC13A3-205ENST00000417157 CCDC191Q8NCU4 936 aa18.18■□□□□ 0.5
SLC13A3-205ENST00000417157 CRAMP1Q96RY5 1269 aa18.18■□□□□ 0.5
SLC13A3-205ENST00000417157 MYD88Q99836 296 aa18.18■□□□□ 0.5
SLC13A3-205ENST00000417157 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
SLC13A3-205ENST00000417157 TMX4Q9H1E5 349 aaPredicted RBP18.18■□□□□ 0.5
SLC13A3-205ENST00000417157 NFKBIEO00221 500 aa18.17■□□□□ 0.5
SLC13A3-205ENST00000417157 FLIIQ13045 1269 aa18.17■□□□□ 0.5
SLC13A3-205ENST00000417157 GRIPAP1Q4V328 841 aa18.17■□□□□ 0.5
SLC13A3-205ENST00000417157 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
SLC13A3-205ENST00000417157 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
SLC13A3-205ENST00000417157 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
SLC13A3-205ENST00000417157 TCERG1O14776 1098 aaKnown RBP18.16■□□□□ 0.5
SLC13A3-205ENST00000417157 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
SLC13A3-205ENST00000417157 ZBTB38Q8NAP3 1195 aaPredicted RBP18.16■□□□□ 0.5
SLC13A3-205ENST00000417157 C7orf43Q8WVR3 580 aa18.16■□□□□ 0.5
SLC13A3-205ENST00000417157 CWC25Q9NXE8 425 aaPredicted RBP18.16■□□□□ 0.5
SLC13A3-205ENST00000417157 SLX4Q8IY92 1834 aa18.15■□□□□ 0.5
SLC13A3-205ENST00000417157 PPEF1O14829 653 aaPredicted RBP18.15■□□□□ 0.5
SLC13A3-205ENST00000417157 HCLS1P14317 486 aaPredicted RBP18.15■□□□□ 0.5
SLC13A3-205ENST00000417157 FKBP5Q13451 457 aaPredicted RBP18.15■□□□□ 0.5
SLC13A3-205ENST00000417157 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
SLC13A3-205ENST00000417157 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
SLC13A3-205ENST00000417157 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
SLC13A3-205ENST00000417157 FAM89AQ96GI7 184 aa18.14■□□□□ 0.49
SLC13A3-205ENST00000417157 CACNA1SQ13698 1873 aa18.14■□□□□ 0.49
SLC13A3-205ENST00000417157 IRS4O14654 1257 aaPredicted RBP18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 PCCAP05165 728 aaPredicted RBP18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 MIER1Q8N108 512 aa18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 ABCC4O15439 1325 aa18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 FER1L6Q2WGJ9 1857 aa18.13■□□□□ 0.49
SLC13A3-205ENST00000417157 SLFN5Q08AF3 891 aa18.12■□□□□ 0.49
SLC13A3-205ENST00000417157 G2E3Q7L622 706 aa18.12■□□□□ 0.49
SLC13A3-205ENST00000417157 TMC4Q7Z404 712 aa18.12■□□□□ 0.49
SLC13A3-205ENST00000417157 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
SLC13A3-205ENST00000417157 BBOX1O75936 387 aa18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 GRAPQ13588 217 aa18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 SF3B3Q15393 1217 aaKnown RBP18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 SYNE4Q8N205 404 aa18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 GRAPLQ8TC17 118 aaPredicted RBP18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 PSMD1Q99460 953 aa18.11■□□□□ 0.49
SLC13A3-205ENST00000417157 LAMB2P55268 1798 aa18.1■□□□□ 0.49
SLC13A3-205ENST00000417157 CDHR2Q9BYE9 1310 aa18.1■□□□□ 0.49
SLC13A3-205ENST00000417157 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
SLC13A3-205ENST00000417157 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
SLC13A3-205ENST00000417157 SBF1O95248 1867 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 TIAM2Q8IVF5 1701 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 DDX60Q8IY21 1712 aaKnown RBP18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 NEURL1BA8MQ27 555 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 PRELPP51888 382 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 DPY19L2Q6NUT2 758 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 ATP6V0A2Q9Y487 856 aa18.09■□□□□ 0.49
SLC13A3-205ENST00000417157 PDE8AO60658 829 aa18.08■□□□□ 0.48
SLC13A3-205ENST00000417157 IGKV5-2P06315 115 aa18.08■□□□□ 0.48
SLC13A3-205ENST00000417157 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
SLC13A3-205ENST00000417157 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.48
SLC13A3-205ENST00000417157 SNED1Q8TER0 1413 aa18.07■□□□□ 0.48
SLC13A3-205ENST00000417157 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
SLC13A3-205ENST00000417157 CWF19L2Q2TBE0 894 aaKnown RBP18.07■□□□□ 0.48
SLC13A3-205ENST00000417157 OLFM4Q6UX06 510 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms