RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	BCL2L12	Q9HB09	334 aa		12.18	□□□□□ -0.46
NIF3L1-206	ENST00000416651	DLEC1	Q9Y238	1755 aa		12.18	□□□□□ -0.46
NIF3L1-206	ENST00000416651	ZNF831	Q5JPB2	1677 aa		12.17	□□□□□ -0.46
NIF3L1-206	ENST00000416651	C2CD5	Q86YS7	1000 aa		12.17	□□□□□ -0.46
NIF3L1-206	ENST00000416651	TTLL6	Q8N841	843 aa		12.17	□□□□□ -0.46
NIF3L1-206	ENST00000416651	VPS9D1	Q9Y2B5	631 aa		12.17	□□□□□ -0.46
NIF3L1-206	ENST00000416651	TONSL	Q96HA7	1378 aa		12.17	□□□□□ -0.46
NIF3L1-206	ENST00000416651	C21orf2	O43822	256 aa		12.16	□□□□□ -0.46
NIF3L1-206	ENST00000416651	ERFE	Q4G0M1	354 aa		12.16	□□□□□ -0.46
NIF3L1-206	ENST00000416651	DICER1	Q9UPY3	1922 aa	Known RBP	12.15	□□□□□ -0.46
NIF3L1-206	ENST00000416651	NRXN2	Q9P2S2	1712 aa		12.15	□□□□□ -0.46
NIF3L1-206	ENST00000416651	ST20-MTHFS	A0A0A6YYL1	179 aa		12.15	□□□□□ -0.46
NIF3L1-206	ENST00000416651	TMEM88B	A6NKF7	163 aa		12.15	□□□□□ -0.46
NIF3L1-206	ENST00000416651	CARD14	Q9BXL6	1004 aa		12.15	□□□□□ -0.46
NIF3L1-206	ENST00000416651	FER1L6	Q2WGJ9	1857 aa		12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ANKRD31	Q8N7Z5	1873 aa		12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	SERPINB2	P05120	415 aa		12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	DNAJC10	Q8IXB1	793 aa		12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	CFAP44	Q96MT7	982 aa		12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	PUS7	Q96PZ0	661 aa	Known RBP	12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	KIF20B	Q96Q89	1820 aa		12.14	□□□□□ -0.47
NIF3L1-206	ENST00000416651	WDR33	Q9C0J8	1336 aa	Known RBP	12.13	□□□□□ -0.47
NIF3L1-206	ENST00000416651	MAP1S	Q66K74	1059 aa	Predicted RBP	12.13	□□□□□ -0.47
NIF3L1-206	ENST00000416651	BICDL1	Q6ZP65	573 aa		12.13	□□□□□ -0.47
NIF3L1-206	ENST00000416651	COL11A2	P13942	1736 aa	Predicted RBP	12.13	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ERVV-2	B6SEH9	535 aa		12.12	□□□□□ -0.47
NIF3L1-206	ENST00000416651	CABP4	P57796	275 aa		12.12	□□□□□ -0.47
NIF3L1-206	ENST00000416651	DEFB115	Q30KQ5	88 aa		12.12	□□□□□ -0.47
NIF3L1-206	ENST00000416651	EAPP	Q56P03	285 aa	Predicted RBP	12.12	□□□□□ -0.47
NIF3L1-206	ENST00000416651	NFATC2IP	Q8NCF5	419 aa		12.12	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ZNF622	Q969S3	477 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
NIF3L1-206	ENST00000416651	SOS1	Q07889	1333 aa	Predicted RBP	12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	RASSF10	A6NK89	507 aa		12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	EIF4A2	Q14240	407 aa	Known RBP	12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	LDHD	Q86WU2	507 aa		12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	MCOLN1	Q9GZU1	580 aa		12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	SLX4	Q8IY92	1834 aa		12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	WASHC2A	Q641Q2	1341 aa		12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ZNF541	Q9H0D2	1346 aa		12.11	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ADAMTSL1	Q8N6G6	1762 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651		H0YIN7	160 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ZPR1	O75312	459 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	GRM1	Q13255	1194 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	OLFM4	Q6UX06	510 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ZNF454	Q8N9F8	522 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ZBTB1	Q9Y2K1	713 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	PDE4DIP	Q5VU43	2346 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	CACNA1S	Q13698	1873 aa		12.1	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ANKRD26	Q9UPS8	1709 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	KIF24	Q5T7B8	1368 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	CASP8AP2	Q9UKL3	1982 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	AOC2	O75106	756 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	SLC39A6	Q13433	755 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	CYP4F22	Q6NT55	531 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	OXER1	Q8TDS5	423 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	SLC4A5	Q9BY07	1137 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	POLK	Q9UBT6	870 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	NARF	Q9UHQ1	456 aa		12.09	□□□□□ -0.47
NIF3L1-206	ENST00000416651	RGS20	O76081	388 aa		12.08	□□□□□ -0.48
NIF3L1-206	ENST00000416651	AEBP1	Q8IUX7	1158 aa		12.08	□□□□□ -0.48
NIF3L1-206	ENST00000416651	CRISPLD2	Q9H0B8	497 aa		12.08	□□□□□ -0.48
NIF3L1-206	ENST00000416651	LTBP1	Q14766	1721 aa		12.08	□□□□□ -0.48
NIF3L1-206	ENST00000416651	CYP19A1	P11511	503 aa	Predicted RBP	12.07	□□□□□ -0.48
NIF3L1-206	ENST00000416651	TBC1D9B	Q66K14	1250 aa		12.07	□□□□□ -0.48
NIF3L1-206	ENST00000416651	CNTROB	Q8N137	903 aa		12.07	□□□□□ -0.48
NIF3L1-206	ENST00000416651	TAOK3	Q9H2K8	898 aa		12.07	□□□□□ -0.48
NIF3L1-206	ENST00000416651	ABT1	Q9ULW3	272 aa	Known RBP	12.07	□□□□□ -0.48
NIF3L1-206	ENST00000416651	COL15A1	P39059	1388 aa		12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	TNNT2	P45379	298 aa	Predicted RBP	12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	THSD4	Q6ZMP0	1018 aa		12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	CAPNS2	Q96L46	248 aa		12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	THSD7B	Q9C0I4	1608 aa		12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	RNF123	Q5XPI4	1314 aa		12.06	□□□□□ -0.48
NIF3L1-206	ENST00000416651	SCN4A	P35499	1836 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	GOLGA8CP	A6NN73	597 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	TRAF5	O00463	557 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	GTPBP6	O43824	516 aa	Predicted RBP	12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	EPHX2	P34913	555 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	MTHFS	P49914	203 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	SOX10	P56693	466 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	MAP2K1	Q02750	393 aa	Predicted RBP	12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	PRR5L	Q6MZQ0	368 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	SLC51A	Q86UW1	340 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	LGR6	Q9HBX8	967 aa		12.05	□□□□□ -0.48
NIF3L1-206	ENST00000416651	CANX	P27824	592 aa	Known RBP	12.04	□□□□□ -0.48
NIF3L1-206	ENST00000416651	CST9	Q5W186	159 aa		12.04	□□□□□ -0.48
NIF3L1-206	ENST00000416651	GPR101	Q96P66	508 aa	Predicted RBP	12.04	□□□□□ -0.48
NIF3L1-206	ENST00000416651	IRX2	Q9BZI1	471 aa	Predicted RBP	12.04	□□□□□ -0.48
NIF3L1-206	ENST00000416651	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.04	□□□□□ -0.48
NIF3L1-206	ENST00000416651	LTBP3	Q9NS15	1303 aa		12.04	□□□□□ -0.48
NIF3L1-206	ENST00000416651	IQCA1L	A6NCM1	817 aa		12.03	□□□□□ -0.48
NIF3L1-206	ENST00000416651	PTPRE	P23469	700 aa		12.03	□□□□□ -0.48
NIF3L1-206	ENST00000416651	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.03	□□□□□ -0.48
NIF3L1-206	ENST00000416651	PRPF40B	Q6NWY9	871 aa	Known RBP	12.03	□□□□□ -0.48
NIF3L1-206	ENST00000416651	ZIC5	Q96T25	663 aa		12.03	□□□□□ -0.48
NIF3L1-206	ENST00000416651	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms