RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
SBDSP1-201ENST00000415772 TCERG1O14776 1098 aaKnown RBP20.5■□□□□ 0.87
SBDSP1-201ENST00000415772 TTLL7Q6ZT98 887 aa20.5■□□□□ 0.87
SBDSP1-201ENST00000415772 PASKQ96RG2 1323 aa20.5■□□□□ 0.87
SBDSP1-201ENST00000415772 ABCC12Q96J65 1359 aa20.49■□□□□ 0.87
SBDSP1-201ENST00000415772 FZD9O00144 591 aa20.49■□□□□ 0.87
SBDSP1-201ENST00000415772 LARGE2Q8N3Y3 721 aa20.49■□□□□ 0.87
SBDSP1-201ENST00000415772 THUMPD2Q9BTF0 503 aaKnown RBP20.49■□□□□ 0.87
SBDSP1-201ENST00000415772 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
SBDSP1-201ENST00000415772 DLG5Q8TDM6 1919 aa20.49■□□□□ 0.87
SBDSP1-201ENST00000415772 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
SBDSP1-201ENST00000415772 CRY2Q49AN0 593 aa20.48■□□□□ 0.87
SBDSP1-201ENST00000415772 IBTKQ9P2D0 1353 aaPredicted RBP20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 MAP1SQ66K74 1059 aaPredicted RBP20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 NLRP3Q96P20 1036 aa20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 ABT1Q9ULW3 272 aaKnown RBP20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 NUP98P52948 1817 aa20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 ERBB4Q15303 1308 aa20.47■□□□□ 0.87
SBDSP1-201ENST00000415772 EIF2S2P20042 333 aaKnown RBP20.46■□□□□ 0.87
SBDSP1-201ENST00000415772 PARP10Q53GL7 1025 aa20.46■□□□□ 0.87
SBDSP1-201ENST00000415772 SUSD4Q5VX71 490 aa20.46■□□□□ 0.87
SBDSP1-201ENST00000415772 GIGYF2Q6Y7W6 1299 aaKnown RBP20.46■□□□□ 0.87
SBDSP1-201ENST00000415772 NIM1KQ8IY84 436 aa20.46■□□□□ 0.87
SBDSP1-201ENST00000415772 RIC1Q4ADV7 1423 aa20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 ITGBL1O95965 494 aaPredicted RBP20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 CTCFP49711 727 aaPredicted RBP20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 VEGFBP49765 207 aa20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 DEFB115Q30KQ5 88 aa20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 CRAMP1Q96RY5 1269 aa20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 PLEKHF1Q96S99 279 aa20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 UBN2Q6ZU65 1347 aa20.45■□□□□ 0.86
SBDSP1-201ENST00000415772 FOXN1O15353 648 aa20.44■□□□□ 0.86
SBDSP1-201ENST00000415772 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
SBDSP1-201ENST00000415772 PAXIP1Q6ZW49 1069 aaPredicted RBP20.44■□□□□ 0.86
SBDSP1-201ENST00000415772 PPIP5K2O43314 1243 aa20.43■□□□□ 0.86
SBDSP1-201ENST00000415772 NTSR2O95665 410 aa20.43■□□□□ 0.86
SBDSP1-201ENST00000415772 LMOD3Q0VAK6 560 aa20.43■□□□□ 0.86
SBDSP1-201ENST00000415772 ZNF34Q8IZ26 560 aa20.43■□□□□ 0.86
SBDSP1-201ENST00000415772 UTP14AQ9BVJ6 771 aaKnown RBP20.43■□□□□ 0.86
SBDSP1-201ENST00000415772 RIPK4P57078 832 aa20.42■□□□□ 0.86
SBDSP1-201ENST00000415772 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
SBDSP1-201ENST00000415772 HSP90AB3PQ58FF7 597 aa20.41■□□□□ 0.86
SBDSP1-201ENST00000415772 PRDM10Q9NQV6 1147 aa20.41■□□□□ 0.86
SBDSP1-201ENST00000415772 AIMP1Q12904 312 aaKnown RBP20.4■□□□□ 0.86
SBDSP1-201ENST00000415772 ADAMTSL1Q8N6G6 1762 aa20.39■□□□□ 0.86
SBDSP1-201ENST00000415772 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 GRM1Q13255 1194 aa20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 AOC3Q16853 763 aa20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 USP50Q70EL3 339 aaPredicted RBP20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 NECTIN2Q92692 538 aa20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 BEGAINQ9BUH8 593 aa20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 DDX21Q9NR30 783 aaKnown RBP eCLIP20.39■□□□□ 0.85
SBDSP1-201ENST00000415772 PCNTO95613 3336 aa20.38■□□□□ 0.85
SBDSP1-201ENST00000415772 RASSF10A6NK89 507 aa20.38■□□□□ 0.85
SBDSP1-201ENST00000415772 EPS15P42566 896 aa20.38■□□□□ 0.85
SBDSP1-201ENST00000415772 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
SBDSP1-201ENST00000415772 ATP6V0A2Q9Y487 856 aa20.38■□□□□ 0.85
SBDSP1-201ENST00000415772 SNED1Q8TER0 1413 aa20.37■□□□□ 0.85
SBDSP1-201ENST00000415772 WDR33Q9C0J8 1336 aaKnown RBP20.37■□□□□ 0.85
SBDSP1-201ENST00000415772 ECE1P42892 770 aa20.37■□□□□ 0.85
SBDSP1-201ENST00000415772 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
SBDSP1-201ENST00000415772 DDX46Q7L014 1031 aaKnown RBP20.37■□□□□ 0.85
SBDSP1-201ENST00000415772 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
SBDSP1-201ENST00000415772 ANXA1P04083 346 aa20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 SCNN1DP51172 638 aa20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 LBX1P52954 281 aa20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 NEUROD2Q15784 382 aa20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 WBP1LQ9NX94 342 aa20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
SBDSP1-201ENST00000415772 ABCC4O15439 1325 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 BBOX1O75936 387 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 RALBP1Q15311 655 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 C3orf67Q6ZVT6 689 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 MPNDQ8N594 471 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 BCL2L13Q9BXK5 485 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 ADARB2Q9NS39 739 aaKnown RBP20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 ZNRF3Q9ULT6 936 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 COL4A5P29400 1685 aa20.35■□□□□ 0.85
SBDSP1-201ENST00000415772 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
SBDSP1-201ENST00000415772 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
SBDSP1-201ENST00000415772 XAGE3Q8WTP9 111 aa20.34■□□□□ 0.85
SBDSP1-201ENST00000415772 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.85
SBDSP1-201ENST00000415772 PDIA6Q15084 440 aa20.33■□□□□ 0.85
SBDSP1-201ENST00000415772 PROSER3Q2NL68 480 aa20.33■□□□□ 0.85
SBDSP1-201ENST00000415772 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 TNIP1Q15025 636 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 WDR43Q15061 677 aaKnown RBP eCLIP20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 NLRP10Q86W26 655 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 SP8Q8IXZ3 490 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 CAPNS2Q96L46 248 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 GPRC5DQ9NZD1 345 aa20.32■□□□□ 0.84
SBDSP1-201ENST00000415772 LTBP1Q14766 1721 aa20.31■□□□□ 0.84
SBDSP1-201ENST00000415772 CXCL9Q07325 125 aa20.31■□□□□ 0.84
SBDSP1-201ENST00000415772 SLC51AQ86UW1 340 aa20.31■□□□□ 0.84
SBDSP1-201ENST00000415772 ANKRD36CQ5JPF3 1778 aa20.31■□□□□ 0.84
SBDSP1-201ENST00000415772 ZEB1P37275 1124 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms