RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
CPNE1-208ENST00000414711 NIP7Q9Y221 180 aaKnown RBP eCLIP21.46■■□□□ 1.03
CPNE1-208ENST00000414711 FAM177BA6PVY3 158 aa21.45■■□□□ 1.02
CPNE1-208ENST00000414711 PIP4K2AP48426 406 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-208ENST00000414711 MORC1Q86VD1 984 aa21.45■■□□□ 1.02
CPNE1-208ENST00000414711 PGAP2Q9UHJ9 254 aa21.45■■□□□ 1.02
CPNE1-208ENST00000414711 TEFQ10587 303 aa21.44■■□□□ 1.02
CPNE1-208ENST00000414711 CRY2Q49AN0 593 aa21.44■■□□□ 1.02
CPNE1-208ENST00000414711 GRIPAP1Q4V328 841 aa21.44■■□□□ 1.02
CPNE1-208ENST00000414711 HABP4Q5JVS0 413 aaKnown RBP21.44■■□□□ 1.02
CPNE1-208ENST00000414711 HPS5Q9UPZ3 1129 aa21.44■■□□□ 1.02
CPNE1-208ENST00000414711 SIPA1L3O60292 1781 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-208ENST00000414711 FAM155AB1AL88 458 aaPredicted RBP21.43■■□□□ 1.02
CPNE1-208ENST00000414711 TRPA1O75762 1119 aa21.43■■□□□ 1.02
CPNE1-208ENST00000414711 CDC37L1Q7L3B6 337 aa21.43■■□□□ 1.02
CPNE1-208ENST00000414711 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
CPNE1-208ENST00000414711 RNF186Q9NXI6 227 aa21.43■■□□□ 1.02
CPNE1-208ENST00000414711 NPC1L1Q9UHC9 1359 aa21.43■■□□□ 1.02
CPNE1-208ENST00000414711 PPIP5K2O43314 1243 aa21.42■■□□□ 1.02
CPNE1-208ENST00000414711 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
CPNE1-208ENST00000414711 ABCC12Q96J65 1359 aa21.42■■□□□ 1.02
CPNE1-208ENST00000414711 CDHR2Q9BYE9 1310 aa21.41■■□□□ 1.02
CPNE1-208ENST00000414711 GTF2E1P29083 439 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-208ENST00000414711 KIF23Q02241 960 aaPredicted RBP21.41■■□□□ 1.02
CPNE1-208ENST00000414711 RGMBQ6NW40 437 aa21.41■■□□□ 1.02
CPNE1-208ENST00000414711 RGL2O15211 777 aa21.4■■□□□ 1.02
CPNE1-208ENST00000414711 SLC51AQ86UW1 340 aa21.4■■□□□ 1.02
CPNE1-208ENST00000414711 AOC3Q16853 763 aa21.39■■□□□ 1.01
CPNE1-208ENST00000414711 TRPM4Q8TD43 1214 aa21.39■■□□□ 1.01
CPNE1-208ENST00000414711 RPGRQ92834 1020 aaKnown RBP21.39■■□□□ 1.01
CPNE1-208ENST00000414711 RIC1Q4ADV7 1423 aa21.38■■□□□ 1.01
CPNE1-208ENST00000414711 HIRAP54198 1017 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-208ENST00000414711 CXCL9Q07325 125 aa21.38■■□□□ 1.01
CPNE1-208ENST00000414711 CCDC102AQ96A19 550 aa21.38■■□□□ 1.01
CPNE1-208ENST00000414711 PANK3Q9H999 370 aa21.38■■□□□ 1.01
CPNE1-208ENST00000414711 AKAP11Q9UKA4 1901 aa21.37■■□□□ 1.01
CPNE1-208ENST00000414711 PPEF1O14829 653 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-208ENST00000414711 IL17REQ8NFR9 667 aa21.37■■□□□ 1.01
CPNE1-208ENST00000414711 ZNRF3Q9ULT6 936 aa21.37■■□□□ 1.01
CPNE1-208ENST00000414711 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
CPNE1-208ENST00000414711 HOXA10P31260 410 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-208ENST00000414711 USP48Q86UV5 1035 aa21.36■■□□□ 1.01
CPNE1-208ENST00000414711 KIF7Q2M1P5 1343 aa21.35■■□□□ 1.01
CPNE1-208ENST00000414711 KCNQ3O43525 872 aa21.35■■□□□ 1.01
CPNE1-208ENST00000414711 ZNF157P51786 506 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-208ENST00000414711 PKN2Q16513 984 aaKnown RBP21.35■■□□□ 1.01
CPNE1-208ENST00000414711 NUTM1Q86Y26 1132 aa21.35■■□□□ 1.01
CPNE1-208ENST00000414711 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
CPNE1-208ENST00000414711 GBA2Q9HCG7 927 aaPredicted RBP21.35■■□□□ 1.01
CPNE1-208ENST00000414711 GNAT3A8MTJ3 354 aa21.34■■□□□ 1.01
CPNE1-208ENST00000414711 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
CPNE1-208ENST00000414711 DLK2Q6UY11 383 aa21.34■■□□□ 1.01
CPNE1-208ENST00000414711 NYXQ9GZU5 481 aa21.34■■□□□ 1.01
CPNE1-208ENST00000414711 PRAMEF22A3QJZ6 481 aa21.33■■□□□ 1.01
CPNE1-208ENST00000414711 C2orf69Q8N8R5 385 aa21.33■■□□□ 1.01
CPNE1-208ENST00000414711 VPS33BQ9H267 617 aa21.33■■□□□ 1.01
CPNE1-208ENST00000414711 SLC10A3P09131 477 aa21.32■■□□□ 1
CPNE1-208ENST00000414711 HLFQ16534 295 aa21.32■■□□□ 1
CPNE1-208ENST00000414711 CRAMP1Q96RY5 1269 aa21.32■■□□□ 1
CPNE1-208ENST00000414711 CSRNP1Q96S65 589 aa21.32■■□□□ 1
CPNE1-208ENST00000414711 SHTN1A0MZ66 631 aa21.31■■□□□ 1
CPNE1-208ENST00000414711 BTBD11A6QL63 1104 aa21.31■■□□□ 1
CPNE1-208ENST00000414711 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
CPNE1-208ENST00000414711 CEMIPQ8WUJ3 1361 aa21.31■■□□□ 1
CPNE1-208ENST00000414711 NBPF26B4DH59 902 aa21.3■■□□□ 1
CPNE1-208ENST00000414711 RAD17O75943 681 aa21.3■■□□□ 1
CPNE1-208ENST00000414711 FXR1P51114 621 aaKnown RBP eCLIP21.3■■□□□ 1
CPNE1-208ENST00000414711 TNIP1Q15025 636 aa21.3■■□□□ 1
CPNE1-208ENST00000414711 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
CPNE1-208ENST00000414711 KRT26Q7Z3Y9 468 aa21.3■■□□□ 1
CPNE1-208ENST00000414711 GAS2L2Q8NHY3 880 aa21.3■■□□□ 1
CPNE1-208ENST00000414711 TMX4Q9H1E5 349 aaPredicted RBP21.3■■□□□ 1
CPNE1-208ENST00000414711 CNOT7Q9UIV1 285 aaKnown RBP21.3■■□□□ 1
CPNE1-208ENST00000414711 HDAC9Q9UKV0 1011 aa21.3■■□□□ 1
CPNE1-208ENST00000414711 MICALL2Q8IY33 904 aa21.29■■□□□ 1
CPNE1-208ENST00000414711 SUPT20HQ8NEM7 779 aa21.29■■□□□ 1
CPNE1-208ENST00000414711 IBTKQ9P2D0 1353 aaPredicted RBP21.28■■□□□ 1
CPNE1-208ENST00000414711 H7C1D1 291 aa21.28■■□□□ 1
CPNE1-208ENST00000414711 SNRPA1P09661 255 aaKnown RBP21.28■■□□□ 1
CPNE1-208ENST00000414711 REM2Q8IYK8 340 aaPredicted RBP21.27■■□□□ 1
CPNE1-208ENST00000414711 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
CPNE1-208ENST00000414711 ATP6V0A2Q9Y487 856 aa21.27■■□□□ 1
CPNE1-208ENST00000414711 ADM5C9JUS6 153 aa21.26■□□□□ 0.99
CPNE1-208ENST00000414711 DIAPH1O60610 1272 aaKnown RBP21.26■□□□□ 0.99
CPNE1-208ENST00000414711 ZNF296Q8WUU4 475 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-208ENST00000414711 KIAA2012Q0VF49 1180 aa21.25■□□□□ 0.99
CPNE1-208ENST00000414711 FBXO46Q6PJ61 603 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-208ENST00000414711 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
CPNE1-208ENST00000414711 SAMD7Q7Z3H4 446 aa21.24■□□□□ 0.99
CPNE1-208ENST00000414711 RASAL3Q86YV0 1011 aa21.24■□□□□ 0.99
CPNE1-208ENST00000414711 KNSTRNQ9Y448 316 aa21.24■□□□□ 0.99
CPNE1-208ENST00000414711 MKI67P46013 3256 aaKnown RBP21.23■□□□□ 0.99
CPNE1-208ENST00000414711 DPP8Q6V1X1 898 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-208ENST00000414711 TBC1D10BQ4KMP7 808 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-208ENST00000414711 DCPSQ96C86 337 aaKnown RBP21.22■□□□□ 0.99
CPNE1-208ENST00000414711 UBN2Q6ZU65 1347 aa21.22■□□□□ 0.99
CPNE1-208ENST00000414711 YDJCA8MPS7 323 aa21.21■□□□□ 0.99
CPNE1-208ENST00000414711 GPTP24298 496 aa21.21■□□□□ 0.99
CPNE1-208ENST00000414711 ZBTB12Q9Y330 459 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-208ENST00000414711 NUP98P52948 1817 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms