RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 IL1RAPL2Q9NP60 686 aa12.67□□□□□ -0.38
TRIM27-203ENST00000414543 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
TRIM27-203ENST00000414543 KCNQ4P56696 695 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 FOXO4P98177 505 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 TTC22Q5TAA0 569 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 RC3H1Q5TC82 1133 aaKnown RBP12.66□□□□□ -0.38
TRIM27-203ENST00000414543 NLRP10Q86W26 655 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 ZBTB38Q8NAP3 1195 aaPredicted RBP12.66□□□□□ -0.38
TRIM27-203ENST00000414543 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 CHMP3Q9Y3E7 222 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 CNTNAP4Q9C0A0 1308 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 NUP98P52948 1817 aa12.66□□□□□ -0.38
TRIM27-203ENST00000414543 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
TRIM27-203ENST00000414543 ANP32AP39687 249 aaKnown RBP12.65□□□□□ -0.38
TRIM27-203ENST00000414543 PDE1AP54750 535 aa12.65□□□□□ -0.38
TRIM27-203ENST00000414543 ANKRD36CQ5JPF3 1778 aa12.65□□□□□ -0.38
TRIM27-203ENST00000414543 BRWD3Q6RI45 1802 aa12.65□□□□□ -0.38
TRIM27-203ENST00000414543 MX1P20591 662 aa12.65□□□□□ -0.39
TRIM27-203ENST00000414543 ZNF34Q8IZ26 560 aa12.65□□□□□ -0.39
TRIM27-203ENST00000414543 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.39
TRIM27-203ENST00000414543 FAM89AQ96GI7 184 aa12.65□□□□□ -0.39
TRIM27-203ENST00000414543 UPF2Q9HAU5 1272 aaKnown RBP12.65□□□□□ -0.39
TRIM27-203ENST00000414543 COPRSQ9NQ92 184 aa12.65□□□□□ -0.39
TRIM27-203ENST00000414543 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.39
TRIM27-203ENST00000414543 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
TRIM27-203ENST00000414543 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
TRIM27-203ENST00000414543 SIL1Q9H173 461 aa12.64□□□□□ -0.39
TRIM27-203ENST00000414543 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
TRIM27-203ENST00000414543 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 CDHR2Q9BYE9 1310 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 RPS6KA4O75676 772 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
TRIM27-203ENST00000414543 RXRBP28702 533 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 RFX5P48382 616 aaPredicted RBP12.63□□□□□ -0.39
TRIM27-203ENST00000414543 PTPN12Q05209 780 aaKnown RBP12.63□□□□□ -0.39
TRIM27-203ENST00000414543 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 STAP2Q9UGK3 403 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 LY75O60449 1722 aa12.63□□□□□ -0.39
TRIM27-203ENST00000414543 SEC24BO95487 1268 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 PARP10Q53GL7 1025 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 PLA2G12BQ9BX93 195 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 AOX1Q06278 1338 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 GNPATO15228 680 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 CDC45O75419 566 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 SASH1O94885 1247 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 TRIM37O94972 964 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 IFIT2P09913 472 aaKnown RBP12.62□□□□□ -0.39
TRIM27-203ENST00000414543 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
TRIM27-203ENST00000414543 RTCBQ9Y3I0 505 aaKnown RBP12.62□□□□□ -0.39
TRIM27-203ENST00000414543 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
TRIM27-203ENST00000414543 IRS4O14654 1257 aaPredicted RBP12.61□□□□□ -0.39
TRIM27-203ENST00000414543 SDSP20132 328 aa12.61□□□□□ -0.39
TRIM27-203ENST00000414543 CCDC57Q2TAC2 916 aa12.61□□□□□ -0.39
TRIM27-203ENST00000414543 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRIM27-203ENST00000414543 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
TRIM27-203ENST00000414543 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
TRIM27-203ENST00000414543 SH3TC1Q8TE82 1336 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 RGL2O15211 777 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 PDE8AO60658 829 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 CSF1RP07333 972 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 TSHZ3Q63HK5 1081 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 CASC1Q6TDU7 716 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 AACSQ86V21 672 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 AK7Q96M32 723 aa12.6□□□□□ -0.39
TRIM27-203ENST00000414543 TTC41PQ6P2S7 1318 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 FAM177BA6PVY3 158 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 ERC2O15083 957 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 ZPR1O75312 459 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
TRIM27-203ENST00000414543 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
TRIM27-203ENST00000414543 MFAP1P55081 439 aaKnown RBP12.59□□□□□ -0.39
TRIM27-203ENST00000414543 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
TRIM27-203ENST00000414543 TAF7LQ5H9L4 462 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 NARFQ9UHQ1 456 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 BCORQ6W2J9 1755 aa12.59□□□□□ -0.39
TRIM27-203ENST00000414543 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 CTSWP56202 376 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 EYA2O00167 538 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
TRIM27-203ENST00000414543 TFCP2Q12800 502 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 EAF2Q96CJ1 260 aaPredicted RBP12.58□□□□□ -0.4
TRIM27-203ENST00000414543 ZNF594Q96JF6 807 aaPredicted RBP12.58□□□□□ -0.4
TRIM27-203ENST00000414543 CCDC85AQ96PX6 553 aaPredicted RBP12.58□□□□□ -0.4
TRIM27-203ENST00000414543 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 ECHDC1Q9NTX5 307 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 FBXO3Q9UK99 471 aa12.58□□□□□ -0.4
TRIM27-203ENST00000414543 USP42Q9H9J4 1324 aaKnown RBP12.57□□□□□ -0.4
TRIM27-203ENST00000414543 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
TRIM27-203ENST00000414543 CIAO1O76071 339 aa12.57□□□□□ -0.4
TRIM27-203ENST00000414543 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms