RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 PHKA2P46019 1235 aa10.87□□□□□ -0.67
SMC4P1-201ENST00000414479 ARSJQ5FYB0 599 aaPredicted RBP10.87□□□□□ -0.67
SMC4P1-201ENST00000414479 LYSMD3Q7Z3D4 306 aa10.87□□□□□ -0.67
SMC4P1-201ENST00000414479 BCS1LQ9Y276 419 aa10.87□□□□□ -0.67
SMC4P1-201ENST00000414479 GJA3Q9Y6H8 435 aa10.87□□□□□ -0.67
SMC4P1-201ENST00000414479 ORC1Q13415 861 aa10.86□□□□□ -0.67
SMC4P1-201ENST00000414479 ZNF438Q7Z4V0 828 aa10.86□□□□□ -0.67
SMC4P1-201ENST00000414479 NLRP2Q9NX02 1062 aa10.86□□□□□ -0.67
SMC4P1-201ENST00000414479 AK5Q9Y6K8 562 aa10.86□□□□□ -0.67
SMC4P1-201ENST00000414479 EIF4BP23588 611 aaKnown RBP10.85□□□□□ -0.67
SMC4P1-201ENST00000414479 XKR5Q6UX68 686 aa10.85□□□□□ -0.67
SMC4P1-201ENST00000414479 HPS1Q92902 700 aa10.85□□□□□ -0.67
SMC4P1-201ENST00000414479 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
SMC4P1-201ENST00000414479 CTSOP43234 321 aaPredicted RBP10.84□□□□□ -0.67
SMC4P1-201ENST00000414479 SCARF1Q14162 830 aa10.84□□□□□ -0.67
SMC4P1-201ENST00000414479 BTLAQ7Z6A9 289 aa10.84□□□□□ -0.67
SMC4P1-201ENST00000414479 CCSER2Q9H7U1 834 aa10.84□□□□□ -0.67
SMC4P1-201ENST00000414479 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 FANCCQ00597 558 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 POU4F2Q12837 409 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 GNL2Q13823 731 aaKnown RBP10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 PRICKLE2Q7Z3G6 844 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 NT5DC4Q86YG4 428 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 RNF217Q8TC41 542 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 UBXN4Q92575 508 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 HSH2DQ96JZ2 352 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 SETDB2Q96T68 719 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 TGIF2Q9GZN2 237 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 TIMMDC1Q9NPL8 285 aa10.83□□□□□ -0.68
SMC4P1-201ENST00000414479 LOC105371045A0A1W2PR82 267 aa10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 ATP4AP20648 1035 aa10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 CMTR1Q8N1G2 835 aaKnown RBP10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 SRCIN1Q9C0H9 1055 aa10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 DMGDHQ9UI17 866 aaKnown RBP10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 RTCBQ9Y3I0 505 aaKnown RBP10.82□□□□□ -0.68
SMC4P1-201ENST00000414479 OPLAHO14841 1288 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 PHACTR2O75167 634 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 TNFRSF21O75509 655 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 INPP5BP32019 993 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 PGBD3Q8N328 593 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 ZNF280CQ8ND82 737 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 C7orf43Q8WVR3 580 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 C11orf16Q9NQ32 467 aa10.81□□□□□ -0.68
SMC4P1-201ENST00000414479 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
SMC4P1-201ENST00000414479 MRPL14Q6P1L8 145 aaKnown RBP10.8□□□□□ -0.68
SMC4P1-201ENST00000414479 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
SMC4P1-201ENST00000414479 PMEPA1Q969W9 287 aa10.8□□□□□ -0.68
SMC4P1-201ENST00000414479 CFHR5Q9BXR6 569 aa10.8□□□□□ -0.68
SMC4P1-201ENST00000414479 A6NHS1 94 aa10.79□□□□□ -0.68
SMC4P1-201ENST00000414479 TTLL8A6PVC2 850 aa10.79□□□□□ -0.68
SMC4P1-201ENST00000414479 LDLRAD1Q5T700 205 aa10.79□□□□□ -0.68
SMC4P1-201ENST00000414479 C9orf131Q5VYM1 1079 aa10.79□□□□□ -0.68
SMC4P1-201ENST00000414479 ZIC5Q96T25 663 aa10.79□□□□□ -0.68
SMC4P1-201ENST00000414479 C12orf49Q9H741 205 aa10.79□□□□□ -0.68
SMC4P1-201ENST00000414479 MSX1P28360 303 aa10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 METTL16Q86W50 562 aaKnown RBP10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 CCDC74AQ96AQ1 378 aa10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 CEP63Q96MT8 703 aa10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 ELP3Q9H9T3 547 aa10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 RNF19AQ9NV58 838 aa10.78□□□□□ -0.68
SMC4P1-201ENST00000414479 A0A1W2PNR3 127 aa10.77□□□□□ -0.69
SMC4P1-201ENST00000414479 HS2ST1Q7LGA3 356 aa10.77□□□□□ -0.69
SMC4P1-201ENST00000414479 FAM8A1Q9UBU6 413 aa10.77□□□□□ -0.69
SMC4P1-201ENST00000414479 FOXD3Q9UJU5 478 aaPredicted RBP10.77□□□□□ -0.69
SMC4P1-201ENST00000414479 TYRO3Q06418 890 aa10.76□□□□□ -0.69
SMC4P1-201ENST00000414479 CRISPLD1Q9H336 500 aa10.76□□□□□ -0.69
SMC4P1-201ENST00000414479 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
SMC4P1-201ENST00000414479 PPP1R1BQ9UD71 204 aaPredicted RBP10.76□□□□□ -0.69
SMC4P1-201ENST00000414479 XYLBO75191 536 aa10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 RAD51AP2Q09MP3 1159 aa10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 TRIP4Q15650 581 aaPredicted RBP10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 EFHC2Q5JST6 749 aa10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 NLRP8Q86W28 1048 aa10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 ABI2Q9NYB9 513 aaPredicted RBP10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 KCNMB2Q9Y691 235 aa10.75□□□□□ -0.69
SMC4P1-201ENST00000414479 SAMD5Q5TGI4 173 aa10.74□□□□□ -0.69
SMC4P1-201ENST00000414479 TRIM67Q6ZTA4 783 aa10.74□□□□□ -0.69
SMC4P1-201ENST00000414479 DYRK1BQ9Y463 629 aa10.74□□□□□ -0.69
SMC4P1-201ENST00000414479 GADD45BO75293 160 aaPredicted RBP10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 EGFRP00533 1210 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 RHOQP17081 205 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 TTC39BQ5VTQ0 682 aaPredicted RBP10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 CAPN10Q9HC96 672 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 BRD7Q9NPI1 651 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
SMC4P1-201ENST00000414479 F11P03951 625 aa10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 LBRQ14739 615 aaKnown RBP10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 FIGNL1Q6PIW4 674 aa10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 ZNF654Q8IZM8 581 aa10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 TANGO6Q9C0B7 1094 aa10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 GPAMQ9HCL2 828 aa10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 NPHS2Q9NP85 383 aa10.72□□□□□ -0.69
SMC4P1-201ENST00000414479 CTSHP09668 335 aa10.71□□□□□ -0.69
SMC4P1-201ENST00000414479 ST13P50502 369 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms