RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
BRCA1-204ENST00000412061 GJD3Q8N144 294 aa7.01□□□□□ -1.29
BRCA1-204ENST00000412061 GPR152Q8TDT2 470 aa7.01□□□□□ -1.29
BRCA1-204ENST00000412061 PUS7Q96PZ0 661 aaKnown RBP7.01□□□□□ -1.29
BRCA1-204ENST00000412061 CDK11AQ9UQ88 783 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-204ENST00000412061 GJA3Q9Y6H8 435 aa7.01□□□□□ -1.29
BRCA1-204ENST00000412061 A0A1W2PNR3 127 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 F11P03951 625 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 ZNF16P17020 682 aaPredicted RBP7□□□□□ -1.29
BRCA1-204ENST00000412061 IDH3AP50213 366 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 LRRC69Q6ZNQ3 347 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 FBXO33Q7Z6M2 555 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 PGBD3Q8N328 593 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 ZSCAN1Q8NBB4 408 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 TTC16Q8NEE8 873 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 PIK3R5Q8WYR1 880 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 KLRG1Q96E93 195 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 CRISPLD1Q9H336 500 aa7□□□□□ -1.29
BRCA1-204ENST00000412061 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
BRCA1-204ENST00000412061 UNCXA6NJT0 531 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 H3BM21 787 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 ARSDP51689 593 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 FMR1Q06787 632 aaKnown RBP eCLIP6.99□□□□□ -1.29
BRCA1-204ENST00000412061 EHHADHQ08426 723 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 BTLAQ7Z6A9 289 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 ALKBH8Q96BT7 664 aaKnown RBP6.99□□□□□ -1.29
BRCA1-204ENST00000412061 NUDT16Q96DE0 195 aaKnown RBP6.99□□□□□ -1.29
BRCA1-204ENST00000412061 GAS2L1Q99501 681 aaPredicted RBP6.99□□□□□ -1.29
BRCA1-204ENST00000412061 GPAMQ9HCL2 828 aa6.99□□□□□ -1.29
BRCA1-204ENST00000412061 OPLAHO14841 1288 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 GPR182O15218 404 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 IGHA2P01877 340 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 P4HBP07237 508 aaKnown RBP6.98□□□□□ -1.29
BRCA1-204ENST00000412061 DSC3Q14574 896 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 NLRP8Q86W28 1048 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 IRF7Q92985 503 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 BCL11AQ9H165 835 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 RUBCNLQ9H714 662 aa6.98□□□□□ -1.29
BRCA1-204ENST00000412061 EPB42P16452 691 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 INPP5BP32019 993 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 MAPK8P45983 427 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 FGD1P98174 961 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 C8orf34Q49A92 452 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 EFHC2Q5JST6 749 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 NIF3L1Q9GZT8 377 aa6.97□□□□□ -1.29
BRCA1-204ENST00000412061 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
BRCA1-204ENST00000412061 SENP3-EIF4A1A0A087X0R7 540 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 FAM181BA6NEQ2 426 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 NEFLP07196 543 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 TYRO3Q06418 890 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 LBRQ14739 615 aaKnown RBP6.96□□□□□ -1.3
BRCA1-204ENST00000412061 SAMD5Q5TGI4 173 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 CEP63Q96MT8 703 aa6.96□□□□□ -1.3
BRCA1-204ENST00000412061 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
BRCA1-204ENST00000412061 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
BRCA1-204ENST00000412061 ATP2B2Q01814 1243 aa6.95□□□□□ -1.3
BRCA1-204ENST00000412061 CMTR1Q8N1G2 835 aaKnown RBP6.95□□□□□ -1.3
BRCA1-204ENST00000412061 MRRFQ96E11 262 aaKnown RBP6.95□□□□□ -1.3
BRCA1-204ENST00000412061 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
BRCA1-204ENST00000412061 GGNBP2Q9H3C7 697 aa6.95□□□□□ -1.3
BRCA1-204ENST00000412061 SOBPA7XYQ1 873 aa6.94□□□□□ -1.3
BRCA1-204ENST00000412061 TAGLNQ01995 201 aaKnown RBP6.94□□□□□ -1.3
BRCA1-204ENST00000412061 PTSQ03393 145 aa6.94□□□□□ -1.3
BRCA1-204ENST00000412061 FIGNL1Q6PIW4 674 aa6.94□□□□□ -1.3
BRCA1-204ENST00000412061 RIPOR1Q6ZS17 1223 aa6.94□□□□□ -1.3
BRCA1-204ENST00000412061 BRD7Q9NPI1 651 aa6.94□□□□□ -1.3
BRCA1-204ENST00000412061 USP20Q9Y2K6 914 aa6.94□□□□□ -1.3
BRCA1-204ENST00000412061 SLC35F4A4IF30 521 aa6.93□□□□□ -1.3
BRCA1-204ENST00000412061 A6NHS1 94 aa6.93□□□□□ -1.3
BRCA1-204ENST00000412061 H7C1W4 665 aa6.93□□□□□ -1.3
BRCA1-204ENST00000412061 LDHBP07195 334 aaKnown RBP6.93□□□□□ -1.3
BRCA1-204ENST00000412061 KCNMB2Q9Y691 235 aa6.93□□□□□ -1.3
BRCA1-204ENST00000412061 PNMA6FA0A0J9YX94 578 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 UBAP1LF5GYI3 381 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
BRCA1-204ENST00000412061 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
BRCA1-204ENST00000412061 PDE12Q6L8Q7 609 aaKnown RBP6.92□□□□□ -1.3
BRCA1-204ENST00000412061 XKR5Q6UX68 686 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 ZNF438Q7Z4V0 828 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 CSRNP1Q96S65 589 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
BRCA1-204ENST00000412061 NUCKS1Q9H1E3 243 aaKnown RBP6.92□□□□□ -1.3
BRCA1-204ENST00000412061 C11orf16Q9NQ32 467 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 IGSF5Q9NSI5 407 aa6.92□□□□□ -1.3
BRCA1-204ENST00000412061 KIAA1522Q9P206 1035 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-204ENST00000412061 ATXN7O15265 892 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-204ENST00000412061 FAM157BP0CG42 384 aa6.91□□□□□ -1.3
BRCA1-204ENST00000412061 ORC1Q13415 861 aa6.91□□□□□ -1.3
BRCA1-204ENST00000412061 TRIP4Q15650 581 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-204ENST00000412061 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
BRCA1-204ENST00000412061 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
BRCA1-204ENST00000412061 DNAJC25Q9H1X3 360 aa6.91□□□□□ -1.3
BRCA1-204ENST00000412061 PCDHGC4Q9Y5F7 938 aa6.91□□□□□ -1.3
BRCA1-204ENST00000412061 EIF1AYO14602 144 aaKnown RBP6.9□□□□□ -1.3
BRCA1-204ENST00000412061 CPNE3O75131 537 aaKnown RBP6.9□□□□□ -1.3
BRCA1-204ENST00000412061 XYLBO75191 536 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 EGFRP00533 1210 aa6.9□□□□□ -1.3
BRCA1-204ENST00000412061 VAMP1P23763 118 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms