RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 PDZRN3Q9UPQ7 1066 aa19.67■□□□□ 0.74
TRAPPC12-203ENST00000411973 IGKV5-2P06315 115 aa19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 GTF2E1P29083 439 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 PDE6BP35913 854 aa19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 ERFEQ4G0M1 354 aa19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 CCDC24Q8N4L8 307 aa19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 TRMT112Q9UI30 125 aaKnown RBP19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 BRCA1P38398 1863 aaKnown RBP19.66■□□□□ 0.74
TRAPPC12-203ENST00000411973 DLEC1Q9Y238 1755 aa19.65■□□□□ 0.74
TRAPPC12-203ENST00000411973 KLRG2A4D1S0 409 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC12-203ENST00000411973 F6X3S4 739 aa19.65■□□□□ 0.74
TRAPPC12-203ENST00000411973 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
TRAPPC12-203ENST00000411973 LINS1Q8NG48 757 aa19.65■□□□□ 0.74
TRAPPC12-203ENST00000411973 DPEP1P16444 411 aa19.64■□□□□ 0.73
TRAPPC12-203ENST00000411973 KCNA3P22001 575 aa19.64■□□□□ 0.73
TRAPPC12-203ENST00000411973 CWC25Q9NXE8 425 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC12-203ENST00000411973 SH3TC1Q8TE82 1336 aa19.64■□□□□ 0.73
TRAPPC12-203ENST00000411973 ABCC12Q96J65 1359 aa19.64■□□□□ 0.73
TRAPPC12-203ENST00000411973 KIF16BQ96L93 1317 aa19.63■□□□□ 0.73
TRAPPC12-203ENST00000411973 A0A0G2JLW4 131 aa19.63■□□□□ 0.73
TRAPPC12-203ENST00000411973 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
TRAPPC12-203ENST00000411973 ZBTB38Q8NAP3 1195 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC12-203ENST00000411973 NOB1Q9ULX3 412 aaKnown RBP19.63■□□□□ 0.73
TRAPPC12-203ENST00000411973 GOLGB1Q14789 3259 aaKnown RBP19.63■□□□□ 0.73
TRAPPC12-203ENST00000411973 COL11A2P13942 1736 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 H0YIN7 160 aa19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 CHRNA5P30532 468 aa19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 CWF19L2Q2TBE0 894 aaKnown RBP19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 BEND3Q5T5X7 828 aa19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 C2CD5Q86YS7 1000 aa19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 ARHGAP45Q92619 1136 aa19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
TRAPPC12-203ENST00000411973 BCAR3O75815 825 aa19.61■□□□□ 0.73
TRAPPC12-203ENST00000411973 PCCAP05165 728 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC12-203ENST00000411973 SRGNP10124 158 aa19.61■□□□□ 0.73
TRAPPC12-203ENST00000411973 SYNE4Q8N205 404 aa19.61■□□□□ 0.73
TRAPPC12-203ENST00000411973 FAM89AQ96GI7 184 aa19.61■□□□□ 0.73
TRAPPC12-203ENST00000411973 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
TRAPPC12-203ENST00000411973 LAMB2P55268 1798 aa19.6■□□□□ 0.73
TRAPPC12-203ENST00000411973 GCKRQ14397 625 aa19.6■□□□□ 0.73
TRAPPC12-203ENST00000411973 CRY2Q49AN0 593 aa19.6■□□□□ 0.73
TRAPPC12-203ENST00000411973 PIM2Q9P1W9 311 aa19.6■□□□□ 0.73
TRAPPC12-203ENST00000411973 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
TRAPPC12-203ENST00000411973 API5Q9BZZ5 524 aaKnown RBP19.59■□□□□ 0.73
TRAPPC12-203ENST00000411973 SRCIN1Q9C0H9 1055 aa19.59■□□□□ 0.73
TRAPPC12-203ENST00000411973 CDHR2Q9BYE9 1310 aa19.58■□□□□ 0.73
TRAPPC12-203ENST00000411973 H7C1W4 665 aa19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 IPO8O15397 1037 aaKnown RBP19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 HCLS1P14317 486 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 STYK1Q6J9G0 422 aa19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 SLC4A10Q6U841 1118 aa19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 MASTLQ96GX5 879 aa19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 NLRP3Q96P20 1036 aa19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 UTRNP46939 3433 aa19.58■□□□□ 0.72
TRAPPC12-203ENST00000411973 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC12-203ENST00000411973 NPR1P16066 1061 aa19.57■□□□□ 0.72
TRAPPC12-203ENST00000411973 ARFGEF1Q9Y6D6 1849 aa19.57■□□□□ 0.72
TRAPPC12-203ENST00000411973 HOXA10P31260 410 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-203ENST00000411973 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-203ENST00000411973 C3orf67Q6ZVT6 689 aa19.56■□□□□ 0.72
TRAPPC12-203ENST00000411973 YBX3P16989 372 aaKnown RBP eCLIP19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 CASP7P55210 303 aa19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 DALRD3Q5D0E6 543 aaKnown RBP19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 ATF7IPQ6VMQ6 1270 aa19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 TTLL6Q8N841 843 aa19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 ZNF622Q969S3 477 aaKnown RBP eCLIP19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 RCAN3Q9UKA8 241 aa19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 MYH3P11055 1940 aa19.55■□□□□ 0.72
TRAPPC12-203ENST00000411973 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 SF3B3Q15393 1217 aaKnown RBP19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 GPR162Q16538 588 aa19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 ZKSCAN2Q63HK3 967 aa19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 UBE3BQ7Z3V4 1068 aa19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 FRAT1Q92837 279 aaPredicted RBP19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 BCS1LQ9Y276 419 aa19.54■□□□□ 0.72
TRAPPC12-203ENST00000411973 ABCC4O15439 1325 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 GRM8O00222 908 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 PDE8AO60658 829 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 TRIM27P14373 513 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 CCT4P50991 539 aaKnown RBP19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 RPGRQ92834 1020 aaKnown RBP19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 PLA2G12BQ9BX93 195 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 WWC3Q9ULE0 1092 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 SLX4Q8IY92 1834 aa19.53■□□□□ 0.72
TRAPPC12-203ENST00000411973 CACNA1SQ13698 1873 aa19.52■□□□□ 0.72
TRAPPC12-203ENST00000411973 GRIN3BO60391 1043 aa19.52■□□□□ 0.72
TRAPPC12-203ENST00000411973 PELP1Q8IZL8 1130 aaKnown RBP19.52■□□□□ 0.72
TRAPPC12-203ENST00000411973 RBM17Q96I25 401 aaKnown RBP19.52■□□□□ 0.72
TRAPPC12-203ENST00000411973 CRAMP1Q96RY5 1269 aa19.52■□□□□ 0.72
TRAPPC12-203ENST00000411973 UTYO14607 1347 aa19.51■□□□□ 0.71
TRAPPC12-203ENST00000411973 INTS3Q68E01 1043 aaKnown RBP19.51■□□□□ 0.71
TRAPPC12-203ENST00000411973 C9orf78Q9NZ63 289 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC12-203ENST00000411973 PRPF40BQ6NWY9 871 aaKnown RBP19.5■□□□□ 0.71
TRAPPC12-203ENST00000411973 USP44Q9H0E7 712 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 194.3 ms