RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 PPP1R42Q7Z4L9 355 aa13.08□□□□□ -0.32
PKP4-203ENST00000411900 RPGRQ92834 1020 aaKnown RBP13.08□□□□□ -0.32
PKP4-203ENST00000411900 ZNF277Q9NRM2 450 aaPredicted RBP13.08□□□□□ -0.32
PKP4-203ENST00000411900 LTBP3Q9NS15 1303 aa13.08□□□□□ -0.32
PKP4-203ENST00000411900 IBTKQ9P2D0 1353 aaPredicted RBP13.07□□□□□ -0.32
PKP4-203ENST00000411900 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
PKP4-203ENST00000411900 CRY2Q49AN0 593 aa13.07□□□□□ -0.32
PKP4-203ENST00000411900 PARP10Q53GL7 1025 aa13.07□□□□□ -0.32
PKP4-203ENST00000411900 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
PKP4-203ENST00000411900 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
PKP4-203ENST00000411900 TAF1P21675 1872 aa13.06□□□□□ -0.32
PKP4-203ENST00000411900 WDR90Q96KV7 1748 aa13.06□□□□□ -0.32
PKP4-203ENST00000411900 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
PKP4-203ENST00000411900 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
PKP4-203ENST00000411900 DPY19L2Q6NUT2 758 aa13.06□□□□□ -0.32
PKP4-203ENST00000411900 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
PKP4-203ENST00000411900 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
PKP4-203ENST00000411900 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
PKP4-203ENST00000411900 HTRA3P83110 453 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 TCIRG1Q13488 830 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 RBM17Q96I25 401 aaKnown RBP13.05□□□□□ -0.32
PKP4-203ENST00000411900 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 IFT57Q9NWB7 429 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
PKP4-203ENST00000411900 RIC1Q4ADV7 1423 aa13.05□□□□□ -0.32
PKP4-203ENST00000411900 POTECB2RU33 542 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 ATP5J2-PTCD1G3V325 749 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 PPEF1O14829 653 aaPredicted RBP13.04□□□□□ -0.32
PKP4-203ENST00000411900 ANP32CO43423 234 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 HOXB7P09629 217 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 HCLS1P14317 486 aaPredicted RBP13.04□□□□□ -0.32
PKP4-203ENST00000411900 APLP1P51693 650 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 GNAI1P63096 354 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 NLRP3Q96P20 1036 aa13.04□□□□□ -0.32
PKP4-203ENST00000411900 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
PKP4-203ENST00000411900 DDX60Q8IY21 1712 aaKnown RBP13.04□□□□□ -0.32
PKP4-203ENST00000411900 HOXA10P31260 410 aaPredicted RBP13.03□□□□□ -0.32
PKP4-203ENST00000411900 CALD1Q05682 793 aaKnown RBP13.03□□□□□ -0.32
PKP4-203ENST00000411900 FSTL1Q12841 308 aa13.03□□□□□ -0.32
PKP4-203ENST00000411900 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
PKP4-203ENST00000411900 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
PKP4-203ENST00000411900 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
PKP4-203ENST00000411900 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
PKP4-203ENST00000411900 SALL2Q9Y467 1007 aaPredicted RBP13.03□□□□□ -0.32
PKP4-203ENST00000411900 ZNF541Q9H0D2 1346 aa13.03□□□□□ -0.32
PKP4-203ENST00000411900 IARSP41252 1262 aaKnown RBP13.02□□□□□ -0.33
PKP4-203ENST00000411900 RTL5Q5HYW3 569 aaPredicted RBP13.02□□□□□ -0.33
PKP4-203ENST00000411900 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.33
PKP4-203ENST00000411900 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
PKP4-203ENST00000411900 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
PKP4-203ENST00000411900 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
PKP4-203ENST00000411900 SNED1Q8TER0 1413 aa13.02□□□□□ -0.33
PKP4-203ENST00000411900 COL4A5P29400 1685 aa13.02□□□□□ -0.33
PKP4-203ENST00000411900 SLC10A5Q5PT55 438 aa13.01□□□□□ -0.33
PKP4-203ENST00000411900 TSPYL6Q8N831 410 aa13.01□□□□□ -0.33
PKP4-203ENST00000411900 ABCC4O15439 1325 aa13.01□□□□□ -0.33
PKP4-203ENST00000411900 SH3TC1Q8TE82 1336 aa13.01□□□□□ -0.33
PKP4-203ENST00000411900 POTEIP0CG38 1075 aa13□□□□□ -0.33
PKP4-203ENST00000411900 POTEJP0CG39 1038 aa13□□□□□ -0.33
PKP4-203ENST00000411900 RIC3Q7Z5B4 369 aa13□□□□□ -0.33
PKP4-203ENST00000411900 FAM89AQ96GI7 184 aa13□□□□□ -0.33
PKP4-203ENST00000411900 ISCA1Q9BUE6 129 aa13□□□□□ -0.33
PKP4-203ENST00000411900 SCN4AP35499 1836 aa12.99□□□□□ -0.33
PKP4-203ENST00000411900 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
PKP4-203ENST00000411900 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
PKP4-203ENST00000411900 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
PKP4-203ENST00000411900 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
PKP4-203ENST00000411900 PSMD1Q99460 953 aa12.99□□□□□ -0.33
PKP4-203ENST00000411900 DDX46Q7L014 1031 aaKnown RBP12.98□□□□□ -0.33
PKP4-203ENST00000411900 LARGE2Q8N3Y3 721 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 JDP2Q8WYK2 163 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 MYD88Q99836 296 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
PKP4-203ENST00000411900 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 GJA3Q9Y6H8 435 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 COL4A1P02462 1669 aa12.98□□□□□ -0.33
PKP4-203ENST00000411900 FZD9O00144 591 aa12.97□□□□□ -0.33
PKP4-203ENST00000411900 AOC3Q16853 763 aa12.97□□□□□ -0.33
PKP4-203ENST00000411900 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
PKP4-203ENST00000411900 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
PKP4-203ENST00000411900 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
PKP4-203ENST00000411900 IQCA1LA6NCM1 817 aa12.96□□□□□ -0.33
PKP4-203ENST00000411900 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
PKP4-203ENST00000411900 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
PKP4-203ENST00000411900 GRAPQ13588 217 aa12.96□□□□□ -0.33
PKP4-203ENST00000411900 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
PKP4-203ENST00000411900 FAM9BQ8IZU0 186 aa12.96□□□□□ -0.33
PKP4-203ENST00000411900 GRAPLQ8TC17 118 aaPredicted RBP12.96□□□□□ -0.33
PKP4-203ENST00000411900 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
PKP4-203ENST00000411900 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.33
PKP4-203ENST00000411900 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
PKP4-203ENST00000411900 BBOX1O75936 387 aa12.95□□□□□ -0.34
PKP4-203ENST00000411900 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
PKP4-203ENST00000411900 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
PKP4-203ENST00000411900 DPP8Q6V1X1 898 aaPredicted RBP12.95□□□□□ -0.34
PKP4-203ENST00000411900 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms