RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 A0A1B0GUL6 1792 aa6.84□□□□□ -1.32
EPHA4-202ENST00000409854 A0A087WZG4 1122 aa6.84□□□□□ -1.32
EPHA4-202ENST00000409854 A0A0G2JS52 829 aa6.84□□□□□ -1.32
EPHA4-202ENST00000409854 HSP90AB4PQ58FF6 505 aa6.84□□□□□ -1.32
EPHA4-202ENST00000409854 HSP90AB3PQ58FF7 597 aa6.84□□□□□ -1.32
EPHA4-202ENST00000409854 EPHA10Q5JZY3 1008 aa6.84□□□□□ -1.32
EPHA4-202ENST00000409854 RGL2O15211 777 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 SMARCA5O60264 1052 aaPredicted RBP6.83□□□□□ -1.32
EPHA4-202ENST00000409854 ZNF772Q68DY9 489 aaPredicted RBP6.83□□□□□ -1.32
EPHA4-202ENST00000409854 UBE3BQ7Z3V4 1068 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 LINC00116Q8NCU8 138 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 CDHR2Q9BYE9 1310 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 ARAP2Q8WZ64 1704 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 AOX1Q06278 1338 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 RFX5P48382 616 aaPredicted RBP6.83□□□□□ -1.32
EPHA4-202ENST00000409854 FOXO4P98177 505 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 HLFQ16534 295 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 TTC22Q5TAA0 569 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 C16orf71Q8IYS4 520 aaPredicted RBP6.83□□□□□ -1.32
EPHA4-202ENST00000409854 PLA2G12BQ9BX93 195 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 SPEF2Q9C093 1822 aa6.83□□□□□ -1.32
EPHA4-202ENST00000409854 PCCAP05165 728 aaPredicted RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 RC3H1Q5TC82 1133 aaKnown RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 DZIP3Q86Y13 1208 aaKnown RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 OTUD7AQ8TE49 926 aaPredicted RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 KIF1BPQ96EK5 621 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 BCL11BQ9C0K0 894 aaPredicted RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 STAP2Q9UGK3 403 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 SURF6O75683 361 aaKnown RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 GSPT1P15170 499 aaKnown RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 RBM6P78332 1123 aaKnown RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 ZNF34Q8IZ26 560 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 RHPN1Q8TCX5 695 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 COPRSQ9NQ92 184 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 ZBTB47Q9UFB7 747 aaPredicted RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 USP42Q9H9J4 1324 aaKnown RBP6.82□□□□□ -1.32
EPHA4-202ENST00000409854 CAMTA2O94983 1202 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 NLRP10Q86W26 655 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 ERC1Q8IUD2 1116 aa6.82□□□□□ -1.32
EPHA4-202ENST00000409854 PDE1AP54750 535 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 ZBTB38Q8NAP3 1195 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-202ENST00000409854 UBN2Q6ZU65 1347 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 FAM196AQ6ZSG2 479 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 KRT27Q7Z3Y8 459 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 ZNF330Q9Y3S2 320 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-202ENST00000409854 QSER1Q2KHR3 1735 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 APBB1O00213 710 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 MX1P20591 662 aa6.81□□□□□ -1.32
EPHA4-202ENST00000409854 PTPN12Q05209 780 aaKnown RBP6.81□□□□□ -1.32
EPHA4-202ENST00000409854 PA2G4Q9UQ80 394 aaKnown RBP6.81□□□□□ -1.32
EPHA4-202ENST00000409854 SASH1O94885 1247 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 SEC24BO95487 1268 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 HOMEZQ8IX15 550 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 JARID2Q92833 1246 aaPredicted RBP6.8□□□□□ -1.32
EPHA4-202ENST00000409854 TBC1D2BQ9UPU7 963 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 CSF1RP07333 972 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 CCNL1Q9UK58 526 aaPredicted RBP6.8□□□□□ -1.32
EPHA4-202ENST00000409854 RPS6KA4O75676 772 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 LMBR1LQ6UX01 489 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 CLEC4GQ6UXB4 293 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 AK7Q96M32 723 aa6.8□□□□□ -1.32
EPHA4-202ENST00000409854 PARP10Q53GL7 1025 aa6.79□□□□□ -1.32
EPHA4-202ENST00000409854 NPM2Q86SE8 214 aaKnown RBP6.79□□□□□ -1.32
EPHA4-202ENST00000409854 FBXO41Q8TF61 875 aa6.79□□□□□ -1.32
EPHA4-202ENST00000409854 IL1RAPL2Q9NP60 686 aa6.79□□□□□ -1.32
EPHA4-202ENST00000409854 TTC41PQ6P2S7 1318 aa6.79□□□□□ -1.32
EPHA4-202ENST00000409854 G3BP1Q13283 466 aaKnown RBP eCLIP6.79□□□□□ -1.32
EPHA4-202ENST00000409854 PI4K2BQ8TCG2 481 aa6.79□□□□□ -1.32
EPHA4-202ENST00000409854 FBXO3Q9UK99 471 aa6.79□□□□□ -1.32
EPHA4-202ENST00000409854 CDC45O75419 566 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 CIAO1O76071 339 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 SDSP20132 328 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 GPTP24298 496 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 KLHDC4Q8TBB5 520 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 FAM89AQ96GI7 184 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.78□□□□□ -1.32
EPHA4-202ENST00000409854 TNRC6CQ9HCJ0 1690 aaKnown RBP6.78□□□□□ -1.32
EPHA4-202ENST00000409854 RTL9Q8NET4 1388 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 NTSR2O95665 410 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 KCNQ4P56696 695 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 SLC27A3Q5K4L6 730 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 TBC1D9Q6ZT07 1266 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 CLASRPQ8N2M8 674 aaKnown RBP6.78□□□□□ -1.32
EPHA4-202ENST00000409854 NARFQ9UHQ1 456 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 ZNF652Q9Y2D9 606 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 MYH7P12883 1935 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 ZNF609O15014 1411 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 NRXN2Q9P2S2 1712 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 OS9Q13438 667 aaPredicted RBP6.78□□□□□ -1.32
EPHA4-202ENST00000409854 SUSD4Q5VX71 490 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 ATG9AQ7Z3C6 839 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 NUTM1Q86Y26 1132 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 BCL2L12Q9HB09 334 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 LRRC4BQ9NT99 713 aa6.78□□□□□ -1.32
EPHA4-202ENST00000409854 RGS17Q9UGC6 210 aaPredicted RBP6.78□□□□□ -1.32
EPHA4-202ENST00000409854 CTSWP56202 376 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 TBC1D32Q96NH3 1257 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 GPR108Q9NPR9 543 aa6.77□□□□□ -1.33
EPHA4-202ENST00000409854 RIC1Q4ADV7 1423 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms